Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS04475

Experiment: Chloramphenicol 0.012 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.012 mg/ml
1,001,393	+		ABZR86_RS04470	0.70	-0.2
1,001,393	+		ABZR86_RS04470	0.70	-0.4
1,001,393	+		ABZR86_RS04470	0.70	-1.1
1,001,394	-		ABZR86_RS04470	0.70	+0.7
1,001,394	-		ABZR86_RS04470	0.70	+0.3
1,001,394	-		ABZR86_RS04470	0.70	+0.5
1,001,394	-		ABZR86_RS04470	0.70	+0.9
1,001,394	-		ABZR86_RS04470	0.70	+0.9
1,001,394	-		ABZR86_RS04470	0.70	-0.0
1,001,398	+		ABZR86_RS04470	0.70	-0.0
1,001,399	+		ABZR86_RS04470	0.70	+1.7
1,001,416	+		ABZR86_RS04470	0.71	-0.2
1,001,416	+		ABZR86_RS04470	0.71	-0.3
1,001,417	-		ABZR86_RS04470	0.71	-2.1
1,001,417	-		ABZR86_RS04470	0.71	-0.2
1,001,420	+		ABZR86_RS04470	0.72	-0.3
1,001,420	+		ABZR86_RS04470	0.72	+1.1
1,001,420	+		ABZR86_RS04470	0.72	-0.4
1,001,420	+		ABZR86_RS04470	0.72	-1.8
1,001,420	+		ABZR86_RS04470	0.72	+0.1
1,001,420	+		ABZR86_RS04470	0.72	-0.4
1,001,421	-		ABZR86_RS04470	0.72	+0.6
1,001,421	-		ABZR86_RS04470	0.72	+0.2
1,001,421	-		ABZR86_RS04470	0.72	-0.4
1,001,421	-		ABZR86_RS04470	0.72	-0.3
1,001,457	+		ABZR86_RS04470	0.74	+0.8
1,001,457	+		ABZR86_RS04470	0.74	-0.2
1,001,458	-		ABZR86_RS04470	0.74	-0.9
1,001,473	+		ABZR86_RS04470	0.75	+0.4
1,001,473	+		ABZR86_RS04470	0.75	-0.2
1,001,473	+		ABZR86_RS04470	0.75	+0.7
1,001,474	-		ABZR86_RS04470	0.75	+1.3
1,001,474	-		ABZR86_RS04470	0.75	-0.6
1,001,534	+		ABZR86_RS04470	0.78	-0.6
1,001,551	+		ABZR86_RS04470	0.79	+0.4
1,001,551	+		ABZR86_RS04470	0.79	+0.5
1,001,551	+		ABZR86_RS04470	0.79	-0.2
1,001,551	+		ABZR86_RS04470	0.79	-0.9
1,001,551	+		ABZR86_RS04470	0.79	+0.3
1,001,551	+		ABZR86_RS04470	0.79	-0.9
1,001,551	+		ABZR86_RS04470	0.79	-0.6
1,001,551	+		ABZR86_RS04470	0.79	-0.5
1,001,552	-		ABZR86_RS04470	0.79	-0.0
1,001,631	+		ABZR86_RS04470	0.83	+1.0
1,001,631	+		ABZR86_RS04470	0.83	+0.1
1,001,632	-		ABZR86_RS04470	0.84	-0.7
1,001,633	+		ABZR86_RS04470	0.84	+0.4
1,001,633	+		ABZR86_RS04470	0.84	+0.3
1,001,633	+		ABZR86_RS04470	0.84	-0.8
1,001,633	+		ABZR86_RS04470	0.84	+0.0
1,001,633	+		ABZR86_RS04470	0.84	+0.5
1,001,633	+		ABZR86_RS04470	0.84	+0.3
1,001,633	+		ABZR86_RS04470	0.84	-1.3
1,001,633	+		ABZR86_RS04470	0.84	-0.6
1,001,634	-		ABZR86_RS04470	0.84	+0.3
1,001,634	-		ABZR86_RS04470	0.84	+1.2
1,001,634	-		ABZR86_RS04470	0.84	-0.3
1,001,634	-		ABZR86_RS04470	0.84	-0.2
1,001,634	-		ABZR86_RS04470	0.84	+0.3
1,001,634	-		ABZR86_RS04470	0.84	+0.3
1,001,634	-		ABZR86_RS04470	0.84	+0.5
1,001,634	-		ABZR86_RS04470	0.84	-0.5
1,001,634	-		ABZR86_RS04470	0.84	+0.2
1,001,669	+		ABZR86_RS04470	0.86	+0.2
1,001,669	+		ABZR86_RS04470	0.86	+2.0
1,001,669	+		ABZR86_RS04470	0.86	-0.6
1,001,669	+		ABZR86_RS04470	0.86	+0.0
1,001,670	-		ABZR86_RS04470	0.86	+0.3
1,001,670	-		ABZR86_RS04470	0.86	+0.4
1,001,670	-		ABZR86_RS04470	0.86	+0.1
1,001,670	-		ABZR86_RS04470	0.86	-0.8
1,001,670	-		ABZR86_RS04470	0.86	-0.8
1,001,670	-		ABZR86_RS04470	0.86	-0.1
1,001,670	-		ABZR86_RS04470	0.86	+0.1
1,001,673	+		ABZR86_RS04470	0.86	-0.1
1,001,673	+		ABZR86_RS04470	0.86	+0.9
1,001,674	-		ABZR86_RS04470	0.86	+0.2
1,001,683	+		ABZR86_RS04470	0.86	+0.5
1,001,684	-		ABZR86_RS04470	0.86	+0.4
1,001,691	-		ABZR86_RS04470	0.87	-0.8
1,001,713	+		ABZR86_RS04470	0.88	-1.9
1,001,714	-		ABZR86_RS04470	0.88	+0.0
1,001,714	-		ABZR86_RS04470	0.88	-0.0
1,001,750	+				-0.2
1,001,750	+				+0.6
1,001,750	+				-0.3
1,001,750	+				+0.2
1,001,751	-				-1.0
1,001,751	-				+0.2
1,001,764	+				+0.1
1,001,764	+				+0.3
1,001,764	+				+0.2
1,001,764	+				-1.8
1,001,765	-				-0.3
1,001,765	-				-0.1
1,001,765	-				+0.5
1,001,765	-				-0.3
1,001,765	-				-1.2
1,001,874	+				+0.1
1,001,874	+				+2.0
1,001,874	+				+0.3
1,001,874	+				-0.5
1,001,875	-				-0.1
1,001,875	-				+2.1
1,001,875	-				-0.0
1,001,921	-				+0.5
1,001,962	-				+0.1
1,001,972	+				-0.0
1,001,972	+				+0.0
1,001,972	+				+2.0
1,001,973	-				-1.1
1,001,973	-				+0.9
1,001,973	-				+0.1
1,001,973	-				+0.9
1,001,973	-				-0.5
1,001,980	+				-0.0
1,001,981	-				-0.1
1,001,981	-				+0.1
1,001,981	-				-0.1
1,001,981	-				-0.8
1,001,987	+				+0.1
1,001,987	+				+0.1
1,001,988	-				+0.1
1,001,988	-				-1.7
1,002,006	+				-0.8
1,002,007	-				+0.1
1,002,007	-				+0.9
1,002,030	+				+0.6
1,002,030	+				-0.2
1,002,030	+				-0.0
1,002,030	+				-0.0
1,002,031	-				-0.0
1,002,031	-				+0.5
1,002,031	-				+0.9
1,002,047	-				+0.9
1,002,047	-				+0.9
1,002,047	-				+0.0
1,002,048	+				+0.8
1,002,048	+				-0.1
1,002,048	+				-0.7
1,002,048	+				-0.6
1,002,048	+				+0.3
1,002,076	-				-0.2
1,002,076	-				-0.6
1,002,076	-				+0.2
1,002,076	-				+1.2
1,002,076	-				+0.0
1,002,076	-				-0.0
1,002,076	-				+0.4
1,002,076	-				-0.9
1,002,076	-				+0.4
1,002,109	+				-0.1
1,002,109	+				-1.5
1,002,125	+				+1.3
1,002,125	+				+0.3
1,002,125	+				+0.6
1,002,125	+				+0.2
1,002,125	+				-0.6
1,002,126	-				+0.1
1,002,126	-				-3.1
1,002,126	-				-0.4
1,002,140	-				+0.4
1,002,143	+				+0.3
1,002,143	+				-0.4
1,002,144	-				-0.7
1,002,144	-				-0.8
1,002,164	-				+0.3
1,002,164	-				-0.4
1,002,164	-				-0.5
1,002,203	+				-0.4
1,002,204	-				+1.0
1,002,204	-				+0.3
1,002,204	-				+0.1
1,002,337	+				-2.4
1,002,338	-				+0.1
1,002,347	+				-1.1
1,002,348	-				+0.7
1,002,348	-				-0.2
1,002,365	+				-0.7
1,002,365	+				-2.1
1,002,365	+				+1.3
1,002,365	+				+0.8
1,002,365	+				+1.1
1,002,365	+				-0.3
1,002,366	-				-0.1
1,002,366	-				-0.6
1,002,366	-				+0.1
1,002,366	-				+0.9
1,002,366	-				+0.3
1,002,366	-				-0.8
1,002,366	-				-0.1
1,002,378	+				-0.6
1,002,379	-				+0.1
1,002,379	-				+0.4
1,002,379	-				+0.2
1,002,394	+				-0.9
1,002,394	+				+0.2
1,002,395	-				+0.2
1,002,395	-				-0.1
1,002,395	-				+0.1
1,002,406	+				+1.2
1,002,406	+				-2.1
1,002,428	+				-0.2
1,002,471	+				-0.1
1,002,471	+				-0.0
1,002,471	+				+0.5
1,002,471	+				-0.5
1,002,472	-				-1.6
1,002,472	-				+1.4
1,002,472	-				-0.5
1,002,472	-				+0.3
1,002,472	-				+1.6
1,002,472	-				-0.4
1,002,478	+		ABZR86_RS04475	0.11	+0.5
1,002,478	+		ABZR86_RS04475	0.11	-0.8
1,002,478	+		ABZR86_RS04475	0.11	+0.3
1,002,479	-		ABZR86_RS04475	0.11	-0.0
1,002,479	-		ABZR86_RS04475	0.11	-1.0
1,002,479	-		ABZR86_RS04475	0.11	-0.8
1,002,479	-		ABZR86_RS04475	0.11	+0.2
1,002,479	-		ABZR86_RS04475	0.11	+0.3
1,002,548	+		ABZR86_RS04475	0.19	+0.2
1,002,549	-		ABZR86_RS04475	0.20	+0.1
1,002,550	+		ABZR86_RS04475	0.20	-0.4
1,002,550	+		ABZR86_RS04475	0.20	-0.3
1,002,550	+		ABZR86_RS04475	0.20	-0.5
1,002,550	+		ABZR86_RS04475	0.20	-1.1
1,002,550	+		ABZR86_RS04475	0.20	+0.4
1,002,550	+		ABZR86_RS04475	0.20	+0.1
1,002,550	+		ABZR86_RS04475	0.20	-0.3
1,002,550	+		ABZR86_RS04475	0.20	-0.2
1,002,550	+		ABZR86_RS04475	0.20	-0.6
1,002,550	+		ABZR86_RS04475	0.20	+1.4
1,002,551	-		ABZR86_RS04475	0.20	-0.5
1,002,551	-		ABZR86_RS04475	0.20	-0.0
1,002,551	-		ABZR86_RS04475	0.20	-1.7
1,002,551	-		ABZR86_RS04475	0.20	+0.4
1,002,551	-		ABZR86_RS04475	0.20	-1.0
1,002,551	-		ABZR86_RS04475	0.20	-0.5
1,002,551	-		ABZR86_RS04475	0.20	-0.4
1,002,551	-		ABZR86_RS04475	0.20	+0.3
1,002,551	-		ABZR86_RS04475	0.20	+1.7
1,002,551	-		ABZR86_RS04475	0.20	-0.3
1,002,551	-		ABZR86_RS04475	0.20	+0.2
1,002,551	-		ABZR86_RS04475	0.20	-0.1
1,002,551	-		ABZR86_RS04475	0.20	-0.0
1,002,623	+		ABZR86_RS04475	0.29	-0.5
1,002,624	-		ABZR86_RS04475	0.29	-0.0
1,002,624	-		ABZR86_RS04475	0.29	-0.2
1,002,654	-		ABZR86_RS04475	0.33	+0.1
1,002,654	-		ABZR86_RS04475	0.33	+0.0
1,002,655	+		ABZR86_RS04475	0.33	-0.6
1,002,655	+		ABZR86_RS04475	0.33	+0.3
1,002,655	+		ABZR86_RS04475	0.33	-2.1
1,002,655	+		ABZR86_RS04475	0.33	+0.1
1,002,655	+		ABZR86_RS04475	0.33	+0.2
1,002,655	+		ABZR86_RS04475	0.33	-0.3
1,002,656	-		ABZR86_RS04475	0.33	+0.3
1,002,656	-		ABZR86_RS04475	0.33	+0.7
1,002,667	+		ABZR86_RS04475	0.34	-0.2
1,002,668	-		ABZR86_RS04475	0.34	+0.1
1,002,668	-		ABZR86_RS04475	0.34	-0.5
1,002,678	+		ABZR86_RS04475	0.36	+0.3
1,002,678	+		ABZR86_RS04475	0.36	+0.1
1,002,678	+		ABZR86_RS04475	0.36	+0.4
1,002,678	+		ABZR86_RS04475	0.36	-0.2
1,002,678	+		ABZR86_RS04475	0.36	+0.9
1,002,678	+		ABZR86_RS04475	0.36	-2.0
1,002,679	-		ABZR86_RS04475	0.36	+0.2
1,002,679	-		ABZR86_RS04475	0.36	-1.0
1,002,688	+		ABZR86_RS04475	0.37	+0.2
1,002,688	+		ABZR86_RS04475	0.37	-0.6
1,002,688	+		ABZR86_RS04475	0.37	-0.0
1,002,688	+		ABZR86_RS04475	0.37	-0.1
1,002,688	+		ABZR86_RS04475	0.37	+0.1
1,002,688	+		ABZR86_RS04475	0.37	+0.2
1,002,688	+		ABZR86_RS04475	0.37	+0.7
1,002,689	-		ABZR86_RS04475	0.37	-0.4
1,002,689	-		ABZR86_RS04475	0.37	-0.1
1,002,689	-		ABZR86_RS04475	0.37	+0.2
1,002,689	-		ABZR86_RS04475	0.37	-0.9
1,002,689	-		ABZR86_RS04475	0.37	+0.0
1,002,691	+		ABZR86_RS04475	0.37	-0.3
1,002,691	+		ABZR86_RS04475	0.37	+0.3
1,002,691	+		ABZR86_RS04475	0.37	+0.3
1,002,691	+		ABZR86_RS04475	0.37	+0.4
1,002,691	+		ABZR86_RS04475	0.37	+0.7
1,002,691	+		ABZR86_RS04475	0.37	+0.9
1,002,692	-		ABZR86_RS04475	0.37	-0.3
1,002,692	-		ABZR86_RS04475	0.37	-0.1
1,002,749	+		ABZR86_RS04475	0.45	+0.8
1,002,776	+		ABZR86_RS04475	0.48	+0.8
1,002,776	+		ABZR86_RS04475	0.48	-1.0
1,002,776	+		ABZR86_RS04475	0.48	-0.8
1,002,777	-		ABZR86_RS04475	0.48	-0.2
1,002,777	-		ABZR86_RS04475	0.48	-0.8
1,002,777	-		ABZR86_RS04475	0.48	-0.2
1,002,790	+		ABZR86_RS04475	0.50	+0.1
1,002,791	-		ABZR86_RS04475	0.50	+1.0
1,002,797	+		ABZR86_RS04475	0.51	+0.0
1,002,798	-		ABZR86_RS04475	0.51	-0.3
1,002,798	-		ABZR86_RS04475	0.51	-1.0
1,002,798	-		ABZR86_RS04475	0.51	-0.1
1,002,844	+		ABZR86_RS04475	0.57	+1.3
1,002,844	+		ABZR86_RS04475	0.57	-0.2
1,002,844	+		ABZR86_RS04475	0.57	-0.2
1,002,844	+		ABZR86_RS04475	0.57	-0.7
1,002,844	+		ABZR86_RS04475	0.57	-0.4
1,002,844	+		ABZR86_RS04475	0.57	+0.2
1,002,844	+		ABZR86_RS04475	0.57	-0.7
1,002,844	+		ABZR86_RS04475	0.57	-0.3
1,002,844	+		ABZR86_RS04475	0.57	+0.3
1,002,844	+		ABZR86_RS04475	0.57	-0.2
1,002,845	-		ABZR86_RS04475	0.57	-0.8
1,002,845	-		ABZR86_RS04475	0.57	+0.4
1,002,845	-		ABZR86_RS04475	0.57	+1.2
1,002,845	-		ABZR86_RS04475	0.57	-0.8
1,002,845	-		ABZR86_RS04475	0.57	-0.1
1,002,845	-		ABZR86_RS04475	0.57	-0.4
1,002,845	-		ABZR86_RS04475	0.57	+0.1
1,002,898	+		ABZR86_RS04475	0.63	+0.1
1,002,898	+		ABZR86_RS04475	0.63	+0.3
1,002,898	+		ABZR86_RS04475	0.63	+0.4
1,002,898	+		ABZR86_RS04475	0.63	+0.5
1,002,898	+		ABZR86_RS04475	0.63	+0.5
1,002,898	+		ABZR86_RS04475	0.63	-2.8
1,002,899	-		ABZR86_RS04475	0.63	+0.9
1,002,899	-		ABZR86_RS04475	0.63	+0.4
1,002,899	-		ABZR86_RS04475	0.63	-0.1
1,002,899	-		ABZR86_RS04475	0.63	+0.2
1,002,899	-		ABZR86_RS04475	0.63	+0.1
1,003,024	+		ABZR86_RS04475	0.79	+0.4
1,003,025	-		ABZR86_RS04475	0.79	-0.2
1,003,027	+		ABZR86_RS04475	0.79	+0.4
1,003,027	+		ABZR86_RS04475	0.79	+0.0
1,003,027	+		ABZR86_RS04475	0.79	-1.5
1,003,027	+		ABZR86_RS04475	0.79	+0.8
1,003,027	+		ABZR86_RS04475	0.79	+0.3
1,003,027	+		ABZR86_RS04475	0.79	+0.1
1,003,028	-		ABZR86_RS04475	0.80	+0.4
1,003,028	-		ABZR86_RS04475	0.80	+0.3
1,003,028	-		ABZR86_RS04475	0.80	+0.8
1,003,028	-		ABZR86_RS04475	0.80	-0.3
1,003,028	-		ABZR86_RS04475	0.80	+0.4
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