Experiment: Chloramphenicol 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00755 and ABZR86_RS00760 are separated by 69 nucleotides ABZR86_RS00760 and ABZR86_RS00765 are separated by 44 nucleotides ABZR86_RS00765 and ABZR86_RS00770 are separated by 118 nucleotides
ABZR86_RS00755: ABZR86_RS00755 - aspartyl/asparaginyl beta-hydroxylase domain-containing protein, at 148,734 to 149,678
_RS00755
ABZR86_RS00760: ABZR86_RS00760 - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 149,748 to 150,533
_RS00760
ABZR86_RS00765: ABZR86_RS00765 - GIY-YIG nuclease family protein, at 150,578 to 150,871
_RS00765
ABZR86_RS00770: ABZR86_RS00770 - PhoH family protein, at 150,990 to 152,369
_RS00770
Position (kb) 150
151 Strain fitness (log2 ratio) -1
0
1
2 at 149.625 kb on + strand at 149.625 kb on + strand at 149.626 kb on - strand at 149.626 kb on - strand at 149.683 kb on + strand at 149.717 kb on + strand at 149.718 kb on - strand at 149.718 kb on - strand at 150.579 kb on + strand at 150.711 kb on + strand, within ABZR86_RS00765 at 150.711 kb on + strand, within ABZR86_RS00765 at 150.711 kb on + strand, within ABZR86_RS00765 at 150.711 kb on + strand, within ABZR86_RS00765 at 150.735 kb on + strand, within ABZR86_RS00765 at 150.736 kb on - strand, within ABZR86_RS00765 at 150.736 kb on - strand, within ABZR86_RS00765 at 150.736 kb on - strand, within ABZR86_RS00765 at 150.736 kb on - strand, within ABZR86_RS00765 at 150.736 kb on - strand, within ABZR86_RS00765 at 150.769 kb on + strand, within ABZR86_RS00765 at 150.770 kb on - strand, within ABZR86_RS00765 at 150.770 kb on - strand, within ABZR86_RS00765 at 150.813 kb on + strand, within ABZR86_RS00765 at 150.813 kb on + strand, within ABZR86_RS00765 at 150.813 kb on + strand, within ABZR86_RS00765 at 150.813 kb on + strand, within ABZR86_RS00765 at 150.813 kb on + strand, within ABZR86_RS00765 at 150.813 kb on + strand, within ABZR86_RS00765 at 150.813 kb on + strand, within ABZR86_RS00765 at 150.813 kb on + strand, within ABZR86_RS00765 at 150.814 kb on - strand, within ABZR86_RS00765 at 150.814 kb on - strand, within ABZR86_RS00765 at 150.814 kb on - strand, within ABZR86_RS00765 at 150.814 kb on - strand, within ABZR86_RS00765 at 150.846 kb on + strand at 150.846 kb on + strand at 150.847 kb on - strand at 150.847 kb on - strand at 150.847 kb on - strand at 150.883 kb on - strand at 150.883 kb on - strand at 150.922 kb on + strand at 150.957 kb on + strand at 150.975 kb on - strand at 150.991 kb on + strand at 151.090 kb on + strand at 151.090 kb on + strand at 151.091 kb on - strand at 151.091 kb on - strand at 151.091 kb on - strand at 151.091 kb on - strand at 151.121 kb on - strand at 151.121 kb on - strand at 151.121 kb on - strand at 151.121 kb on - strand at 151.240 kb on + strand, within ABZR86_RS00770 at 151.241 kb on - strand, within ABZR86_RS00770 at 151.658 kb on + strand, within ABZR86_RS00770 at 151.658 kb on + strand, within ABZR86_RS00770 at 151.658 kb on + strand, within ABZR86_RS00770 at 151.658 kb on + strand, within ABZR86_RS00770 at 151.658 kb on + strand, within ABZR86_RS00770 at 151.658 kb on + strand, within ABZR86_RS00770 at 151.658 kb on + strand, within ABZR86_RS00770 at 151.658 kb on + strand, within ABZR86_RS00770 at 151.659 kb on - strand, within ABZR86_RS00770 at 151.792 kb on + strand, within ABZR86_RS00770 at 151.792 kb on + strand, within ABZR86_RS00770 at 151.792 kb on + strand, within ABZR86_RS00770 at 151.792 kb on + strand, within ABZR86_RS00770 at 151.792 kb on + strand, within ABZR86_RS00770 at 151.793 kb on - strand, within ABZR86_RS00770 at 151.793 kb on - strand, within ABZR86_RS00770 at 151.793 kb on - strand, within ABZR86_RS00770
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.012 mg/ml remove 149,625 + -1.3 149,625 + -0.2 149,626 - +0.6 149,626 - -0.0 149,683 + -0.2 149,717 + +0.5 149,718 - -0.3 149,718 - -0.3 150,579 + -1.4 150,711 + ABZR86_RS00765 0.45 -0.8 150,711 + ABZR86_RS00765 0.45 +0.5 150,711 + ABZR86_RS00765 0.45 +0.4 150,711 + ABZR86_RS00765 0.45 -0.1 150,735 + ABZR86_RS00765 0.53 -0.1 150,736 - ABZR86_RS00765 0.54 -0.1 150,736 - ABZR86_RS00765 0.54 -0.4 150,736 - ABZR86_RS00765 0.54 -0.2 150,736 - ABZR86_RS00765 0.54 -0.1 150,736 - ABZR86_RS00765 0.54 +1.0 150,769 + ABZR86_RS00765 0.65 -0.2 150,770 - ABZR86_RS00765 0.65 +0.5 150,770 - ABZR86_RS00765 0.65 -0.1 150,813 + ABZR86_RS00765 0.80 -0.1 150,813 + ABZR86_RS00765 0.80 +0.7 150,813 + ABZR86_RS00765 0.80 +0.0 150,813 + ABZR86_RS00765 0.80 +0.3 150,813 + ABZR86_RS00765 0.80 -0.2 150,813 + ABZR86_RS00765 0.80 +0.4 150,813 + ABZR86_RS00765 0.80 -0.7 150,813 + ABZR86_RS00765 0.80 +0.5 150,814 - ABZR86_RS00765 0.80 +0.2 150,814 - ABZR86_RS00765 0.80 -0.7 150,814 - ABZR86_RS00765 0.80 -0.9 150,814 - ABZR86_RS00765 0.80 -0.4 150,846 + -0.2 150,846 + +0.2 150,847 - -0.1 150,847 - +2.1 150,847 - +0.1 150,883 - -0.6 150,883 - +0.3 150,922 + +2.0 150,957 + -0.0 150,975 - +1.7 150,991 + -0.5 151,090 + -1.3 151,090 + -0.4 151,091 - -0.6 151,091 - -0.1 151,091 - +0.2 151,091 - -0.3 151,121 - +0.2 151,121 - -0.6 151,121 - +0.3 151,121 - -0.8 151,240 + ABZR86_RS00770 0.18 +1.0 151,241 - ABZR86_RS00770 0.18 +0.5 151,658 + ABZR86_RS00770 0.48 -0.2 151,658 + ABZR86_RS00770 0.48 -0.1 151,658 + ABZR86_RS00770 0.48 +1.2 151,658 + ABZR86_RS00770 0.48 -1.1 151,658 + ABZR86_RS00770 0.48 +0.3 151,658 + ABZR86_RS00770 0.48 +0.9 151,658 + ABZR86_RS00770 0.48 +0.5 151,658 + ABZR86_RS00770 0.48 +0.3 151,659 - ABZR86_RS00770 0.48 -0.6 151,792 + ABZR86_RS00770 0.58 +0.5 151,792 + ABZR86_RS00770 0.58 +0.6 151,792 + ABZR86_RS00770 0.58 +1.4 151,792 + ABZR86_RS00770 0.58 -0.0 151,792 + ABZR86_RS00770 0.58 -0.4 151,793 - ABZR86_RS00770 0.58 +0.2 151,793 - ABZR86_RS00770 0.58 +0.5 151,793 - ABZR86_RS00770 0.58 -0.3
Or see this region's nucleotide sequence