Strain Fitness in Sinorhizobium meliloti 1021 around SMa1636

Experiment: Cytosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMa1636 and SMa1637 are separated by 30 nucleotides SMa1636: SMa1636 - transposase TRm17a, at 911,789 to 912,589 SMa1636 SMa1637: SMa1637 - transposase TRm17b, at 912,620 to 913,126 SMa1637 Position (kb) 911 912 913Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 910.927 kb on + strandat 911.056 kb on + strandat 911.069 kb on - strandat 911.089 kb on + strandat 911.115 kb on - strandat 911.141 kb on - strandat 911.172 kb on + strandat 911.217 kb on + strandat 911.217 kb on + strandat 911.217 kb on + strandat 911.218 kb on - strandat 911.218 kb on - strandat 911.246 kb on - strandat 911.255 kb on + strandat 911.256 kb on - strandat 911.279 kb on + strandat 911.389 kb on + strandat 911.390 kb on - strandat 911.397 kb on + strandat 911.398 kb on - strandat 911.408 kb on - strandat 911.534 kb on - strandat 911.619 kb on - strandat 911.620 kb on + strandat 911.620 kb on + strandat 911.621 kb on - strandat 913.578 kb on + strandat 913.579 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cytosine (N)
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910,927 + +0.6
911,056 + +1.1
911,069 - +0.4
911,089 + -1.0
911,115 - +0.0
911,141 - -1.7
911,172 + -3.9
911,217 + +0.8
911,217 + +0.6
911,217 + -1.7
911,218 - -0.7
911,218 - +0.9
911,246 - -0.3
911,255 + +0.0
911,256 - -1.3
911,279 + -0.4
911,389 + +1.5
911,390 - +0.8
911,397 + -1.1
911,398 - +0.1
911,408 - -1.2
911,534 - +0.4
911,619 - +1.7
911,620 + -0.2
911,620 + -1.5
911,621 - +0.3
913,578 + +0.0
913,579 - -0.0

Or see this region's nucleotide sequence