Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1362 and SMa1363 overlap by 4 nucleotides SMa1363 and SMa1364 are separated by 63 nucleotides
SMa1362: SMa1362 - inner-membrane permease, at 746,199 to 747,599
SMa1362
SMa1363: SMa1363 - ABC transporter permease, at 747,596 to 748,684
SMa1363
SMa1364: SMa1364 - ABC transporter substrate-binding protein, at 748,748 to 749,968
SMa1364
Position (kb) 747
748
749 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 746.607 kb on + strand, within SMa1362 at 746.607 kb on + strand, within SMa1362 at 746.654 kb on - strand, within SMa1362 at 746.813 kb on + strand, within SMa1362 at 746.814 kb on - strand, within SMa1362 at 746.871 kb on + strand, within SMa1362 at 746.884 kb on + strand, within SMa1362 at 747.024 kb on - strand, within SMa1362 at 747.044 kb on + strand, within SMa1362 at 747.045 kb on - strand, within SMa1362 at 747.045 kb on - strand, within SMa1362 at 747.061 kb on + strand, within SMa1362 at 747.062 kb on - strand, within SMa1362 at 747.182 kb on - strand, within SMa1362 at 747.257 kb on + strand, within SMa1362 at 747.257 kb on + strand, within SMa1362 at 747.258 kb on - strand, within SMa1362 at 747.278 kb on - strand, within SMa1362 at 747.397 kb on + strand, within SMa1362 at 747.442 kb on - strand, within SMa1362 at 747.444 kb on - strand, within SMa1362 at 747.444 kb on - strand, within SMa1362 at 747.499 kb on + strand at 747.499 kb on + strand at 747.500 kb on - strand at 747.501 kb on + strand at 747.652 kb on + strand at 747.653 kb on - strand at 747.653 kb on - strand at 747.730 kb on - strand, within SMa1363 at 747.735 kb on + strand, within SMa1363 at 747.736 kb on - strand, within SMa1363 at 747.738 kb on + strand, within SMa1363 at 747.779 kb on + strand, within SMa1363 at 747.806 kb on + strand, within SMa1363 at 747.807 kb on - strand, within SMa1363 at 747.807 kb on - strand, within SMa1363 at 747.869 kb on + strand, within SMa1363 at 747.869 kb on + strand, within SMa1363 at 747.869 kb on + strand, within SMa1363 at 747.869 kb on + strand, within SMa1363 at 747.869 kb on + strand, within SMa1363 at 747.870 kb on - strand, within SMa1363 at 747.921 kb on + strand, within SMa1363 at 747.922 kb on - strand, within SMa1363 at 747.924 kb on - strand, within SMa1363 at 747.998 kb on + strand, within SMa1363 at 748.052 kb on + strand, within SMa1363 at 748.072 kb on + strand, within SMa1363 at 748.072 kb on + strand, within SMa1363 at 748.072 kb on + strand, within SMa1363 at 748.072 kb on + strand, within SMa1363 at 748.072 kb on + strand, within SMa1363 at 748.183 kb on - strand, within SMa1363 at 748.183 kb on - strand, within SMa1363 at 748.522 kb on - strand, within SMa1363 at 748.733 kb on + strand at 748.891 kb on + strand, within SMa1364 at 748.891 kb on + strand, within SMa1364 at 748.892 kb on - strand, within SMa1364 at 748.981 kb on + strand, within SMa1364 at 748.982 kb on - strand, within SMa1364 at 749.038 kb on + strand, within SMa1364 at 749.038 kb on + strand, within SMa1364 at 749.039 kb on - strand, within SMa1364 at 749.039 kb on - strand, within SMa1364 at 749.042 kb on + strand, within SMa1364 at 749.043 kb on - strand, within SMa1364 at 749.072 kb on - strand, within SMa1364 at 749.228 kb on + strand, within SMa1364 at 749.322 kb on + strand, within SMa1364 at 749.322 kb on + strand, within SMa1364 at 749.350 kb on + strand, within SMa1364 at 749.357 kb on + strand, within SMa1364 at 749.424 kb on + strand, within SMa1364 at 749.424 kb on + strand, within SMa1364 at 749.575 kb on + strand, within SMa1364 at 749.575 kb on + strand, within SMa1364 at 749.598 kb on + strand, within SMa1364
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 746,607 + SMa1362 0.29 -0.4 746,607 + SMa1362 0.29 +1.5 746,654 - SMa1362 0.32 +0.4 746,813 + SMa1362 0.44 -3.2 746,814 - SMa1362 0.44 -0.2 746,871 + SMa1362 0.48 +0.3 746,884 + SMa1362 0.49 +1.1 747,024 - SMa1362 0.59 -0.6 747,044 + SMa1362 0.60 +0.1 747,045 - SMa1362 0.60 -0.4 747,045 - SMa1362 0.60 +0.1 747,061 + SMa1362 0.62 -0.3 747,062 - SMa1362 0.62 +0.7 747,182 - SMa1362 0.70 -0.2 747,257 + SMa1362 0.76 -3.2 747,257 + SMa1362 0.76 +0.6 747,258 - SMa1362 0.76 +0.2 747,278 - SMa1362 0.77 +1.4 747,397 + SMa1362 0.86 +2.2 747,442 - SMa1362 0.89 -0.3 747,444 - SMa1362 0.89 -1.7 747,444 - SMa1362 0.89 +0.7 747,499 + +1.0 747,499 + -0.1 747,500 - -1.2 747,501 + +1.3 747,652 + +0.4 747,653 - -0.1 747,653 - -2.7 747,730 - SMa1363 0.12 -0.5 747,735 + SMa1363 0.13 +0.2 747,736 - SMa1363 0.13 -2.7 747,738 + SMa1363 0.13 -0.2 747,779 + SMa1363 0.17 +0.0 747,806 + SMa1363 0.19 -2.6 747,807 - SMa1363 0.19 +0.1 747,807 - SMa1363 0.19 -0.1 747,869 + SMa1363 0.25 -0.8 747,869 + SMa1363 0.25 +0.9 747,869 + SMa1363 0.25 -0.0 747,869 + SMa1363 0.25 -0.8 747,869 + SMa1363 0.25 +0.6 747,870 - SMa1363 0.25 -0.6 747,921 + SMa1363 0.30 +0.6 747,922 - SMa1363 0.30 -1.7 747,924 - SMa1363 0.30 -2.0 747,998 + SMa1363 0.37 -0.7 748,052 + SMa1363 0.42 +0.6 748,072 + SMa1363 0.44 -3.4 748,072 + SMa1363 0.44 +2.1 748,072 + SMa1363 0.44 +0.2 748,072 + SMa1363 0.44 +2.2 748,072 + SMa1363 0.44 +0.9 748,183 - SMa1363 0.54 -1.1 748,183 - SMa1363 0.54 -0.6 748,522 - SMa1363 0.85 +0.1 748,733 + -3.6 748,891 + SMa1364 0.12 -3.2 748,891 + SMa1364 0.12 -2.9 748,892 - SMa1364 0.12 +3.3 748,981 + SMa1364 0.19 +0.9 748,982 - SMa1364 0.19 +0.5 749,038 + SMa1364 0.24 -0.6 749,038 + SMa1364 0.24 +0.0 749,039 - SMa1364 0.24 -2.5 749,039 - SMa1364 0.24 +0.6 749,042 + SMa1364 0.24 -0.5 749,043 - SMa1364 0.24 -3.0 749,072 - SMa1364 0.27 -0.4 749,228 + SMa1364 0.39 +0.2 749,322 + SMa1364 0.47 -0.3 749,322 + SMa1364 0.47 +0.4 749,350 + SMa1364 0.49 -0.2 749,357 + SMa1364 0.50 -0.4 749,424 + SMa1364 0.55 +1.4 749,424 + SMa1364 0.55 +0.5 749,575 + SMa1364 0.68 +0.9 749,575 + SMa1364 0.68 +0.0 749,598 + SMa1364 0.70 -0.5
Or see this region's nucleotide sequence