Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21167 and SM_b21168 are separated by 176 nucleotides SM_b21168 and SM_b21169 are separated by 35 nucleotides SM_b21169 and SM_b21170 are separated by 19 nucleotides
SM_b21167: SM_b21167 - reverse transcriptasematurase, at 913,644 to 915,005
_b21167
SM_b21168: SM_b21168 - integral membrane transporter protein, at 915,182 to 916,366
_b21168
SM_b21169: SM_b21169 - ArsR family transcriptional regulator, at 916,402 to 916,827
_b21169
SM_b21170: SM_b21170 - guanylate kinase, at 916,847 to 917,434
_b21170
Position (kb) 915
916
917 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 914.503 kb on + strand, within SM_b21167 at 914.503 kb on + strand, within SM_b21167 at 914.503 kb on + strand, within SM_b21167 at 914.504 kb on + strand, within SM_b21167 at 914.504 kb on - strand, within SM_b21167 at 914.504 kb on - strand, within SM_b21167 at 914.711 kb on - strand, within SM_b21167 at 915.060 kb on + strand at 915.060 kb on + strand at 915.060 kb on + strand at 915.060 kb on + strand at 915.060 kb on + strand at 915.165 kb on + strand at 915.166 kb on - strand at 915.349 kb on - strand, within SM_b21168 at 915.465 kb on - strand, within SM_b21168 at 915.597 kb on + strand, within SM_b21168 at 915.598 kb on - strand, within SM_b21168 at 915.705 kb on + strand, within SM_b21168 at 915.705 kb on + strand, within SM_b21168 at 915.736 kb on - strand, within SM_b21168 at 916.136 kb on + strand, within SM_b21168 at 916.137 kb on - strand, within SM_b21168 at 916.216 kb on - strand, within SM_b21168 at 916.327 kb on + strand at 916.327 kb on + strand at 916.328 kb on - strand at 916.442 kb on + strand at 916.505 kb on + strand, within SM_b21169 at 916.505 kb on + strand, within SM_b21169 at 916.505 kb on + strand, within SM_b21169 at 916.505 kb on + strand, within SM_b21169 at 916.506 kb on - strand, within SM_b21169 at 916.614 kb on + strand, within SM_b21169 at 916.614 kb on + strand, within SM_b21169 at 916.614 kb on + strand, within SM_b21169 at 916.615 kb on - strand, within SM_b21169 at 916.621 kb on + strand, within SM_b21169 at 916.621 kb on + strand, within SM_b21169 at 916.622 kb on - strand at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand, within SM_b21169 at 916.659 kb on + strand, within SM_b21169 at 916.660 kb on - strand, within SM_b21169 at 916.660 kb on - strand, within SM_b21169 at 916.743 kb on + strand, within SM_b21169 at 916.867 kb on + strand at 916.867 kb on + strand at 917.081 kb on - strand, within SM_b21170 at 917.127 kb on - strand, within SM_b21170 at 917.181 kb on + strand, within SM_b21170 at 917.182 kb on - strand, within SM_b21170 at 917.182 kb on - strand, within SM_b21170
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 914,503 + SM_b21167 0.63 -1.8 914,503 + SM_b21167 0.63 -2.5 914,503 + SM_b21167 0.63 -0.3 914,504 + SM_b21167 0.63 +0.6 914,504 - SM_b21167 0.63 +3.5 914,504 - SM_b21167 0.63 -0.6 914,711 - SM_b21167 0.78 -1.9 915,060 + -1.0 915,060 + -1.0 915,060 + -1.0 915,060 + +4.5 915,060 + +0.3 915,165 + +0.3 915,166 - -2.3 915,349 - SM_b21168 0.14 +0.2 915,465 - SM_b21168 0.24 -0.6 915,597 + SM_b21168 0.35 -0.7 915,598 - SM_b21168 0.35 -1.7 915,705 + SM_b21168 0.44 -0.3 915,705 + SM_b21168 0.44 +0.3 915,736 - SM_b21168 0.47 -1.5 916,136 + SM_b21168 0.81 -0.1 916,137 - SM_b21168 0.81 -0.3 916,216 - SM_b21168 0.87 -0.8 916,327 + +1.5 916,327 + -0.2 916,328 - +0.1 916,442 + +0.2 916,505 + SM_b21169 0.24 +0.8 916,505 + SM_b21169 0.24 +0.0 916,505 + SM_b21169 0.24 -1.1 916,505 + SM_b21169 0.24 +0.6 916,506 - SM_b21169 0.24 -0.9 916,614 + SM_b21169 0.50 -3.0 916,614 + SM_b21169 0.50 -0.4 916,614 + SM_b21169 0.50 +0.3 916,615 - SM_b21169 0.50 -0.6 916,621 + SM_b21169 0.51 -0.5 916,621 + SM_b21169 0.51 -0.5 916,622 - +2.4 916,622 - SM_b21169 0.52 +0.8 916,622 - SM_b21169 0.52 -1.6 916,622 - +1.9 916,622 - SM_b21169 0.52 +0.2 916,622 - SM_b21169 0.52 +1.4 916,622 - SM_b21169 0.52 +0.4 916,659 + SM_b21169 0.60 -0.5 916,660 - SM_b21169 0.61 +0.9 916,660 - SM_b21169 0.61 +2.1 916,743 + SM_b21169 0.80 +2.1 916,867 + +2.5 916,867 + +0.2 917,081 - SM_b21170 0.40 +0.3 917,127 - SM_b21170 0.48 +0.9 917,181 + SM_b21170 0.57 +0.2 917,182 - SM_b21170 0.57 -1.8 917,182 - SM_b21170 0.57 +0.7
Or see this region's nucleotide sequence