Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2261

Experiment: Choline chloride 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 200 mM
2,576,460	+		Pf1N1B4_2260	0.15	-2.0
2,576,460	+		Pf1N1B4_2260	0.15	+1.3
2,576,460	+		Pf1N1B4_2260	0.15	-1.2
2,576,460	+		Pf1N1B4_2260	0.15	-0.7
2,576,461	-		Pf1N1B4_2260	0.15	-1.3
2,576,461	-		Pf1N1B4_2260	0.15	+0.5
2,576,461	-		Pf1N1B4_2260	0.15	+0.3
2,576,461	-		Pf1N1B4_2260	0.15	-0.1
2,576,467	+		Pf1N1B4_2260	0.16	-0.3
2,576,468	-		Pf1N1B4_2260	0.16	-1.1
2,576,468	-		Pf1N1B4_2260	0.16	-0.7
2,576,592	-		Pf1N1B4_2260	0.27	+0.1
2,576,606	+		Pf1N1B4_2260	0.28	+0.7
2,576,607	-		Pf1N1B4_2260	0.28	+0.4
2,576,610	+		Pf1N1B4_2260	0.29	-1.3
2,576,610	+		Pf1N1B4_2260	0.29	+1.3
2,576,610	+		Pf1N1B4_2260	0.29	-0.8
2,576,610	+		Pf1N1B4_2260	0.29	+0.3
2,576,610	+		Pf1N1B4_2260	0.29	-0.3
2,576,611	-		Pf1N1B4_2260	0.29	-1.6
2,576,611	-		Pf1N1B4_2260	0.29	-0.2
2,576,611	-		Pf1N1B4_2260	0.29	+1.3
2,576,611	-		Pf1N1B4_2260	0.29	-2.3
2,576,671	-		Pf1N1B4_2260	0.34	-1.3
2,576,682	+		Pf1N1B4_2260	0.35	-1.0
2,576,682	+		Pf1N1B4_2260	0.35	+0.6
2,576,682	+		Pf1N1B4_2260	0.35	-0.8
2,576,683	-		Pf1N1B4_2260	0.35	+0.9
2,576,683	-		Pf1N1B4_2260	0.35	-0.3
2,576,683	-		Pf1N1B4_2260	0.35	-0.3
2,576,709	+		Pf1N1B4_2260	0.38	+0.3
2,576,859	+		Pf1N1B4_2260	0.51	-1.3
2,576,859	+		Pf1N1B4_2260	0.51	+0.2
2,576,859	+		Pf1N1B4_2260	0.51	+0.6
2,576,859	+		Pf1N1B4_2260	0.51	-1.1
2,576,859	+		Pf1N1B4_2260	0.51	+0.7
2,576,859	+		Pf1N1B4_2260	0.51	+1.3
2,576,859	+		Pf1N1B4_2260	0.51	+0.3
2,576,859	+		Pf1N1B4_2260	0.51	+0.3
2,576,860	-		Pf1N1B4_2260	0.51	+0.0
2,576,860	-		Pf1N1B4_2260	0.51	+2.9
2,576,860	-		Pf1N1B4_2260	0.51	-0.7
2,576,860	-		Pf1N1B4_2260	0.51	+0.9
2,576,860	-		Pf1N1B4_2260	0.51	-1.3
2,576,860	-		Pf1N1B4_2260	0.51	-0.7
2,576,860	-		Pf1N1B4_2260	0.51	+0.1
2,576,860	-		Pf1N1B4_2260	0.51	-1.7
2,576,860	-		Pf1N1B4_2260	0.51	+0.3
2,576,860	-		Pf1N1B4_2260	0.51	-0.1
2,576,898	+		Pf1N1B4_2260	0.55	-1.5
2,576,898	+		Pf1N1B4_2260	0.55	-0.3
2,576,898	+		Pf1N1B4_2260	0.55	-0.8
2,576,899	-		Pf1N1B4_2260	0.55	-0.3
2,576,920	+		Pf1N1B4_2260	0.57	-0.7
2,576,921	-		Pf1N1B4_2260	0.57	+1.3
2,576,937	+				+0.3
2,576,937	+		Pf1N1B4_2260	0.58	+0.3
2,576,946	+		Pf1N1B4_2260	0.59	-1.0
2,576,946	+		Pf1N1B4_2260	0.59	-1.0
2,576,946	+		Pf1N1B4_2260	0.59	+0.8
2,576,946	+		Pf1N1B4_2260	0.59	+1.3
2,576,947	-		Pf1N1B4_2260	0.59	-1.3
2,576,947	-		Pf1N1B4_2260	0.59	-0.3
2,576,947	-				-0.7
2,576,964	+		Pf1N1B4_2260	0.61	+1.5
2,576,964	+		Pf1N1B4_2260	0.61	+0.5
2,576,964	+		Pf1N1B4_2260	0.61	+1.3
2,576,965	-		Pf1N1B4_2260	0.61	-0.4
2,576,965	-		Pf1N1B4_2260	0.61	+0.1
2,576,965	-		Pf1N1B4_2260	0.61	-1.5
2,576,965	-		Pf1N1B4_2260	0.61	-1.3
2,577,076	-		Pf1N1B4_2260	0.71	-0.3
2,577,171	+		Pf1N1B4_2260	0.80	+0.3
2,577,171	+		Pf1N1B4_2260	0.80	+0.7
2,577,171	+		Pf1N1B4_2260	0.80	+0.9
2,577,171	+		Pf1N1B4_2260	0.80	+0.3
2,577,171	+		Pf1N1B4_2260	0.80	-0.7
2,577,172	-		Pf1N1B4_2260	0.80	+0.0
2,577,172	-		Pf1N1B4_2260	0.80	-1.3
2,577,172	-		Pf1N1B4_2260	0.80	+0.4
2,577,172	-		Pf1N1B4_2260	0.80	-0.3
2,577,172	-		Pf1N1B4_2260	0.80	-0.7
2,577,172	-		Pf1N1B4_2260	0.80	-0.6
2,577,172	-		Pf1N1B4_2260	0.80	-0.3
2,577,172	-		Pf1N1B4_2260	0.80	+1.0
2,577,283	+				+1.9
2,577,283	+				-1.8
2,577,283	+				-0.3
2,577,283	+				+0.1
2,577,283	+				+0.9
2,577,283	+				-0.7
2,577,283	+				-1.6
2,577,284	-				+0.1
2,577,284	-				-1.7
2,577,284	-				-2.3
2,577,285	+				+1.6
2,577,285	+				-0.5
2,577,315	+				-1.3
2,577,315	+				+1.1
2,577,315	+				-1.0
2,577,315	+				+0.3
2,577,315	+				-0.1
2,577,315	+				+0.7
2,577,315	+				-0.1
2,577,315	+				-1.8
2,577,315	+				-0.7
2,577,315	+				+0.0
2,577,315	+				+0.3
2,577,315	+				+0.7
2,577,315	+				-0.7
2,577,315	+				+0.6
2,577,315	+				+0.3
2,577,315	+				-0.1
2,577,315	+				-0.3
2,577,315	+				-1.8
2,577,315	+				+0.7
2,577,315	+				+1.0
2,577,315	+				-0.3
2,577,315	+				-0.3
2,577,315	+				+2.1
2,577,315	+				-0.7
2,577,315	+				+1.2
2,577,315	+				+0.0
2,577,315	+				+2.6
2,577,315	+				+1.3
2,577,315	+				-0.3
2,577,315	+				-1.8
2,577,315	+				+1.3
2,577,316	-				-0.1
2,577,316	-				+0.7
2,577,316	-				-1.0
2,577,316	-				+1.6
2,577,316	-				-0.5
2,577,316	-				-0.4
2,577,316	-				-0.0
2,577,316	-				+1.0
2,577,316	-				-0.6
2,577,316	-				-2.0
2,577,316	-				-0.7
2,577,316	-				-1.0
2,577,316	-				+0.2
2,577,316	-				-1.3
2,577,316	-				+0.9
2,577,316	-				+2.3
2,577,316	-				-0.5
2,577,316	-				+0.2
2,577,316	-				+1.3
2,577,316	-				-0.9
2,577,319	+				+0.9
2,577,319	+				-1.1
2,577,319	+				+0.4
2,577,319	+				-0.0
2,577,320	-				-1.5
2,577,320	-				-0.7
2,577,390	+				-0.8
2,577,391	-				-0.5
2,577,391	-				-1.5
2,577,391	-				+0.6
2,577,401	+				-0.3
2,577,402	-				+0.7
2,577,451	+				-0.7
2,577,451	+				+0.3
2,577,451	+				+1.3
2,577,475	+				-0.5
2,577,476	-				-0.7
2,577,478	-				-0.2
2,577,478	-				+1.3
2,577,478	-				+0.2
2,577,478	-				-1.0
2,577,478	-				+1.2
2,577,478	-				+1.9
2,577,478	-				-0.8
2,577,507	+				-0.3
2,577,507	+				+0.7
2,577,507	+				+0.1
2,577,507	+				-0.4
2,577,507	+				+2.9
2,577,507	+				-0.2
2,577,507	+				+1.3
2,577,508	-				-1.5
2,577,508	-				+1.0
2,577,508	-				+1.7
2,577,508	-				-0.6
2,577,508	-				-0.0
2,577,508	-				-0.3
2,577,691	+		Pf1N1B4_2261	0.21	-1.0
2,577,691	+		Pf1N1B4_2261	0.21	+1.3
2,577,760	+		Pf1N1B4_2261	0.27	-2.4
2,577,887	-		Pf1N1B4_2261	0.38	-1.3
2,578,174	+		Pf1N1B4_2261	0.63	-2.7
2,578,174	+		Pf1N1B4_2261	0.63	-1.0
2,578,174	+		Pf1N1B4_2261	0.63	+1.0
2,578,174	+		Pf1N1B4_2261	0.63	-1.5
2,578,174	+		Pf1N1B4_2261	0.63	-1.8
2,578,300	+		Pf1N1B4_2261	0.74	+0.1
2,578,300	+		Pf1N1B4_2261	0.74	-1.6
2,578,300	+		Pf1N1B4_2261	0.74	-1.1
2,578,300	+		Pf1N1B4_2261	0.74	+1.0
2,578,300	+		Pf1N1B4_2261	0.74	-0.3
2,578,300	+		Pf1N1B4_2261	0.74	+0.3
2,578,300	+		Pf1N1B4_2261	0.74	-2.1
2,578,301	-		Pf1N1B4_2261	0.74	-1.0
2,578,301	-		Pf1N1B4_2261	0.74	-0.3
2,578,301	-		Pf1N1B4_2261	0.74	-1.0
2,578,348	+		Pf1N1B4_2261	0.78	-0.8
2,578,348	+		Pf1N1B4_2261	0.78	-0.1
2,578,349	-		Pf1N1B4_2261	0.78	-1.0
2,578,349	-		Pf1N1B4_2261	0.78	-0.7
2,578,349	-		Pf1N1B4_2261	0.78	-1.1
2,578,438	+		Pf1N1B4_2261	0.86	+0.3
2,578,438	+		Pf1N1B4_2261	0.86	-1.3
2,578,438	+		Pf1N1B4_2261	0.86	+0.7
2,578,462	+		Pf1N1B4_2261	0.88	+0.3
2,578,462	+		Pf1N1B4_2261	0.88	-0.4
2,578,462	+		Pf1N1B4_2261	0.88	+0.3
2,578,462	+		Pf1N1B4_2261	0.88	-2.0
2,578,463	-		Pf1N1B4_2261	0.88	-0.3
2,578,463	-		Pf1N1B4_2261	0.88	-0.7
2,578,463	-		Pf1N1B4_2261	0.88	-3.0
2,578,463	-		Pf1N1B4_2261	0.88	-0.4
2,578,463	-		Pf1N1B4_2261	0.88	+1.9
2,578,552	+				-1.0
2,578,552	+				-0.6
2,578,552	+				-2.6
2,578,552	+				+0.3
2,578,552	+				-1.0
2,578,552	+				-2.6
2,578,552	+				-0.8
2,578,552	+				-1.3
2,578,552	+				-0.3
2,578,553	-				-1.4
2,578,553	-				-2.3
2,578,553	-				-1.3
2,578,553	-				+0.3
2,578,553	-				+1.5
2,578,573	-				-1.6
2,578,583	+				-1.0
2,578,583	+				+2.6
2,578,583	+				+1.3
2,578,583	+				-0.0
2,578,584	-				-1.7
2,578,584	-				+0.1
2,578,584	-				+1.3
2,578,630	+				-2.5
2,578,630	+				+0.6
2,578,630	+				-0.1
2,578,630	+				-1.8
2,578,756	-		Pf1N1B4_2262	0.18	+0.6
2,578,767	+		Pf1N1B4_2262	0.19	-0.4
2,578,767	+		Pf1N1B4_2262	0.19	+0.3
2,578,767	+		Pf1N1B4_2262	0.19	-2.4
2,578,767	+		Pf1N1B4_2262	0.19	-0.9
2,578,767	+		Pf1N1B4_2262	0.19	+0.2
2,578,767	+		Pf1N1B4_2262	0.19	-0.4
2,578,767	+		Pf1N1B4_2262	0.19	-0.8
2,578,767	+		Pf1N1B4_2262	0.19	+1.7
2,578,768	-		Pf1N1B4_2262	0.19	+1.5
2,578,768	-		Pf1N1B4_2262	0.19	-0.3
2,578,768	-		Pf1N1B4_2262	0.19	-1.5
2,578,768	-		Pf1N1B4_2262	0.19	+1.6
2,578,768	-		Pf1N1B4_2262	0.19	+0.9
2,578,803	-		Pf1N1B4_2262	0.23	+0.6
2,578,803	-		Pf1N1B4_2262	0.23	-1.7
2,578,815	+				+0.3
2,578,815	+		Pf1N1B4_2262	0.24	-1.0
2,578,815	+		Pf1N1B4_2262	0.24	+0.3
2,578,815	+		Pf1N1B4_2262	0.24	-1.9
2,578,815	+		Pf1N1B4_2262	0.24	-0.9
2,578,815	+		Pf1N1B4_2262	0.24	+0.8
2,578,815	+		Pf1N1B4_2262	0.24	-0.7
2,578,816	-		Pf1N1B4_2262	0.24	-0.0
2,578,842	+		Pf1N1B4_2262	0.27	-0.4
2,578,842	+		Pf1N1B4_2262	0.27	+1.6
2,578,842	+		Pf1N1B4_2262	0.27	-0.3
2,578,842	+		Pf1N1B4_2262	0.27	-0.3
2,578,842	+		Pf1N1B4_2262	0.27	-1.0
2,578,842	+		Pf1N1B4_2262	0.27	+0.1
2,578,842	+		Pf1N1B4_2262	0.27	-0.3
2,578,842	+		Pf1N1B4_2262	0.27	-0.4
2,578,843	-		Pf1N1B4_2262	0.27	-0.2
2,578,843	-		Pf1N1B4_2262	0.27	-0.8
2,578,843	-		Pf1N1B4_2262	0.27	-1.6
2,578,843	-		Pf1N1B4_2262	0.27	+1.1
2,578,843	-		Pf1N1B4_2262	0.27	-1.6
2,578,843	-		Pf1N1B4_2262	0.27	+0.6
2,578,854	+		Pf1N1B4_2262	0.28	-0.7
2,578,855	-		Pf1N1B4_2262	0.28	+0.0
2,578,924	-		Pf1N1B4_2262	0.36	-0.9
2,579,013	+		Pf1N1B4_2262	0.46	+0.4
2,579,014	-		Pf1N1B4_2262	0.46	-0.7
2,579,014	-		Pf1N1B4_2262	0.46	-0.3
2,579,014	-		Pf1N1B4_2262	0.46	+0.4
2,579,121	+		Pf1N1B4_2262	0.57	-1.1
2,579,122	-		Pf1N1B4_2262	0.57	+0.1
2,579,122	-		Pf1N1B4_2262	0.57	+0.7
2,579,122	-		Pf1N1B4_2262	0.57	-0.3
2,579,136	+		Pf1N1B4_2262	0.59	-0.7
2,579,136	+		Pf1N1B4_2262	0.59	-0.3
2,579,137	-		Pf1N1B4_2262	0.59	-0.9
2,579,137	-		Pf1N1B4_2262	0.59	+0.0
2,579,137	-		Pf1N1B4_2262	0.59	+0.9
2,579,142	+		Pf1N1B4_2262	0.60	+0.1
2,579,142	+		Pf1N1B4_2262	0.60	+0.1
2,579,142	+		Pf1N1B4_2262	0.60	-0.1
2,579,143	-		Pf1N1B4_2262	0.60	-0.2
2,579,143	-		Pf1N1B4_2262	0.60	-0.5
2,579,480	+				+0.3
2,579,481	-				+0.3
2,579,481	-				-2.3
2,579,564	+				-1.8
2,579,564	+				+2.3
2,579,564	+				+1.0
2,579,564	+				-1.5
2,579,564	+				-0.4
2,579,591	+				+0.0
2,579,592	-				-0.9
2,579,592	-				-1.0
2,579,592	-				-1.3