Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2223

Experiment: Choline chloride 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 200 mM
2,536,170	+		Pf1N1B4_2221	0.84	+1.6
2,536,170	+		Pf1N1B4_2221	0.84	+0.4
2,536,171	-		Pf1N1B4_2221	0.85	+0.3
2,536,171	-		Pf1N1B4_2221	0.85	+1.4
2,536,171	-		Pf1N1B4_2221	0.85	+0.5
2,536,352	+				+1.0
2,536,353	-				+0.5
2,536,358	+				-0.6
2,536,358	+				-0.8
2,536,358	+				-0.5
2,536,358	+				-1.3
2,536,358	+				+0.0
2,536,358	+				-0.8
2,536,358	+				+0.4
2,536,358	+				-0.2
2,536,358	+				+0.9
2,536,358	+				-0.8
2,536,358	+				-0.4
2,536,358	+				-0.8
2,536,358	+				-0.4
2,536,358	+				+0.1
2,536,359	-				+1.6
2,536,359	-				+1.0
2,536,359	-				-0.6
2,536,359	-				-1.6
2,536,359	-				-0.2
2,536,359	-				-0.7
2,536,359	-				+1.4
2,536,359	-				-1.0
2,536,359	-				+0.0
2,536,359	-				+0.6
2,536,359	-				+1.4
2,536,359	-				-0.2
2,536,359	-				+0.0
2,536,412	-				+0.2
2,536,412	-				-0.2
2,536,439	-				+1.1
2,536,565	+		Pf1N1B4_2222	0.23	-0.6
2,536,565	+		Pf1N1B4_2222	0.23	-0.1
2,536,565	+		Pf1N1B4_2222	0.23	+0.5
2,536,565	+		Pf1N1B4_2222	0.23	-0.2
2,536,565	+		Pf1N1B4_2222	0.23	-1.2
2,536,565	+		Pf1N1B4_2222	0.23	+0.6
2,536,565	+		Pf1N1B4_2222	0.23	+0.7
2,536,565	+		Pf1N1B4_2222	0.23	+0.0
2,536,566	-		Pf1N1B4_2222	0.23	-0.2
2,536,566	-		Pf1N1B4_2222	0.23	-0.6
2,536,566	-		Pf1N1B4_2222	0.23	-0.5
2,536,566	-		Pf1N1B4_2222	0.23	-0.6
2,536,566	-		Pf1N1B4_2222	0.23	+1.2
2,536,566	-		Pf1N1B4_2222	0.23	+0.4
2,536,566	-		Pf1N1B4_2222	0.23	+0.4
2,536,566	-		Pf1N1B4_2222	0.23	-1.7
2,536,566	-		Pf1N1B4_2222	0.23	-0.1
2,536,598	+				+0.8
2,536,598	+		Pf1N1B4_2222	0.31	-0.8
2,536,598	+		Pf1N1B4_2222	0.31	+0.6
2,536,598	+		Pf1N1B4_2222	0.31	-1.9
2,536,598	+		Pf1N1B4_2222	0.31	-0.5
2,536,599	-		Pf1N1B4_2222	0.31	+0.0
2,536,631	+		Pf1N1B4_2222	0.39	+1.4
2,536,631	+				-1.5
2,536,631	+		Pf1N1B4_2222	0.39	+0.5
2,536,631	+		Pf1N1B4_2222	0.39	-1.8
2,536,631	+		Pf1N1B4_2222	0.39	+0.4
2,536,631	+		Pf1N1B4_2222	0.39	+0.2
2,536,631	+		Pf1N1B4_2222	0.39	-0.1
2,536,957	-				-0.4
2,537,020	+				-1.0
2,537,134	+		Pf1N1B4_2223	0.25	-2.1
2,537,135	-		Pf1N1B4_2223	0.26	+0.5
2,537,227	+		Pf1N1B4_2223	0.46	-2.2
2,537,227	+		Pf1N1B4_2223	0.46	-0.0
2,537,227	+		Pf1N1B4_2223	0.46	-3.0
2,537,228	-		Pf1N1B4_2223	0.46	+0.3
2,537,228	-		Pf1N1B4_2223	0.46	-1.3
2,537,324	-		Pf1N1B4_2223	0.67	-1.0
2,537,324	-		Pf1N1B4_2223	0.67	-1.2
2,537,324	-		Pf1N1B4_2223	0.67	-0.2
2,537,377	+		Pf1N1B4_2223	0.79	-0.9
2,537,465	-				-2.5
2,537,517	+				-1.0
2,537,517	+				+0.2
2,537,517	+				+0.3
2,537,518	-				+0.0
2,537,589	+				+1.3
2,537,589	+				+0.3
2,537,590	-				-0.1
2,537,613	+				+1.5
2,537,619	+				+0.3
2,537,619	+				-0.2
2,537,620	-				+1.5
2,537,691	+		Pf1N1B4_2224	0.13	-1.0
2,537,691	+		Pf1N1B4_2224	0.13	-0.7
2,537,691	+		Pf1N1B4_2224	0.13	+0.9
2,537,691	+		Pf1N1B4_2224	0.13	+0.9
2,537,692	-		Pf1N1B4_2224	0.13	+0.5
2,537,692	-		Pf1N1B4_2224	0.13	-2.1
2,537,708	-		Pf1N1B4_2224	0.24	-1.0
2,537,858	-				+0.3
2,537,869	+				-0.2
2,537,869	+				-0.2
2,537,869	+				-0.3
2,537,869	+				-0.7
2,537,869	+				+0.8
2,537,869	+				-1.0
2,537,870	-				-0.2
2,537,870	-				+0.6
2,537,870	-				+1.8
2,537,870	-				+0.8
2,537,870	-				+1.8
2,537,904	+				-0.1
2,537,904	+				-0.2
2,537,904	+				+0.2
2,537,904	+				-0.9
2,537,905	-				+0.6
2,537,905	-				+2.6
2,538,001	+				+0.3
2,538,002	-		Pf1N1B4_2225	0.24	+1.7
2,538,002	-		Pf1N1B4_2225	0.24	+1.3
2,538,019	+		Pf1N1B4_2225	0.27	-0.1
2,538,019	+		Pf1N1B4_2225	0.27	+0.9
2,538,019	+		Pf1N1B4_2225	0.27	+0.1
2,538,020	-		Pf1N1B4_2225	0.27	+1.8
2,538,020	-		Pf1N1B4_2225	0.27	+0.5
2,538,020	-		Pf1N1B4_2225	0.27	-0.7
2,538,020	-		Pf1N1B4_2225	0.27	+0.1
2,538,229	+		Pf1N1B4_2225	0.62	+1.0
2,538,229	+		Pf1N1B4_2225	0.62	-1.7
2,538,229	+		Pf1N1B4_2225	0.62	-0.5
2,538,229	+		Pf1N1B4_2225	0.62	+1.3
2,538,229	+		Pf1N1B4_2225	0.62	+0.3
2,538,229	+		Pf1N1B4_2225	0.62	-0.7
2,538,229	+		Pf1N1B4_2225	0.62	+1.8
2,538,229	+		Pf1N1B4_2225	0.62	-0.7
2,538,229	+		Pf1N1B4_2225	0.62	+0.0
2,538,229	+		Pf1N1B4_2225	0.62	-1.0
2,538,229	+		Pf1N1B4_2225	0.62	+1.7
2,538,229	+		Pf1N1B4_2225	0.62	+0.3
2,538,229	+		Pf1N1B4_2225	0.62	-1.4
2,538,229	+		Pf1N1B4_2225	0.62	+0.6
2,538,229	+		Pf1N1B4_2225	0.62	+0.7
2,538,229	+		Pf1N1B4_2225	0.62	-0.4
2,538,230	-		Pf1N1B4_2225	0.62	+1.7
2,538,230	-		Pf1N1B4_2225	0.62	-1.2
2,538,230	-		Pf1N1B4_2225	0.62	-1.1
2,538,230	-				+3.7
2,538,230	-		Pf1N1B4_2225	0.62	-0.1
2,538,230	-		Pf1N1B4_2225	0.62	+0.6
2,538,230	-		Pf1N1B4_2225	0.62	+1.3
2,538,230	-		Pf1N1B4_2225	0.62	+1.3
2,538,230	-		Pf1N1B4_2225	0.62	-1.5
2,538,230	-		Pf1N1B4_2225	0.62	-0.4
2,538,230	-		Pf1N1B4_2225	0.62	+0.7
2,538,230	-		Pf1N1B4_2225	0.62	-0.5
2,538,230	-		Pf1N1B4_2225	0.62	+1.9
2,538,230	-		Pf1N1B4_2225	0.62	+0.8
2,538,230	-		Pf1N1B4_2225	0.62	+1.3
2,538,230	-		Pf1N1B4_2225	0.62	-0.7
2,538,230	-		Pf1N1B4_2225	0.62	+1.5
2,538,230	-		Pf1N1B4_2225	0.62	+0.9
2,538,230	-		Pf1N1B4_2225	0.62	-0.2
2,538,230	-		Pf1N1B4_2225	0.62	-0.0
2,538,230	-		Pf1N1B4_2225	0.62	+1.7
2,538,230	-		Pf1N1B4_2225	0.62	+2.2
2,538,230	-		Pf1N1B4_2225	0.62	+1.9
2,538,230	-				+1.3
2,538,230	-		Pf1N1B4_2225	0.62	+0.6
2,538,230	-		Pf1N1B4_2225	0.62	-0.4
2,538,233	+		Pf1N1B4_2225	0.62	-0.1
2,538,233	+		Pf1N1B4_2225	0.62	-1.6
2,538,233	+		Pf1N1B4_2225	0.62	+0.0
2,538,233	+		Pf1N1B4_2225	0.62	-1.2
2,538,233	+		Pf1N1B4_2225	0.62	-1.4
2,538,233	+		Pf1N1B4_2225	0.62	-2.0
2,538,233	+		Pf1N1B4_2225	0.62	-1.8
2,538,233	+		Pf1N1B4_2225	0.62	+1.3
2,538,234	-		Pf1N1B4_2225	0.62	+0.0
2,538,234	-		Pf1N1B4_2225	0.62	+0.9
2,538,234	-		Pf1N1B4_2225	0.62	+0.3
2,538,234	-		Pf1N1B4_2225	0.62	+2.9
2,538,234	-		Pf1N1B4_2225	0.62	+0.4
2,538,234	-		Pf1N1B4_2225	0.62	+0.9
2,538,234	-		Pf1N1B4_2225	0.62	+0.9
2,538,301	+		Pf1N1B4_2225	0.73	-2.2
2,538,301	+		Pf1N1B4_2225	0.73	-0.2
2,538,301	+		Pf1N1B4_2225	0.73	+1.3
2,538,302	-		Pf1N1B4_2225	0.74	-0.8
2,538,302	-		Pf1N1B4_2225	0.74	+0.1
2,538,302	-		Pf1N1B4_2225	0.74	+2.3
2,538,302	-		Pf1N1B4_2225	0.74	-1.5
2,538,353	+		Pf1N1B4_2225	0.82	-0.2
2,538,353	+		Pf1N1B4_2225	0.82	+0.0
2,538,353	+		Pf1N1B4_2225	0.82	-0.5
2,538,353	+		Pf1N1B4_2225	0.82	-0.4
2,538,354	-		Pf1N1B4_2225	0.82	-0.8
2,538,354	-		Pf1N1B4_2225	0.82	-1.5
2,538,354	-		Pf1N1B4_2225	0.82	-0.2
2,538,354	-		Pf1N1B4_2225	0.82	+1.3
2,538,354	-		Pf1N1B4_2225	0.82	+0.0
2,538,355	+		Pf1N1B4_2225	0.82	+0.1
2,538,355	+		Pf1N1B4_2225	0.82	+0.3
2,538,355	+		Pf1N1B4_2225	0.82	+0.2
2,538,355	+		Pf1N1B4_2225	0.82	+0.2
2,538,355	+		Pf1N1B4_2225	0.82	+1.7
2,538,355	+		Pf1N1B4_2225	0.82	+0.0
2,538,355	+		Pf1N1B4_2225	0.82	+0.8
2,538,355	+		Pf1N1B4_2225	0.82	+0.2
2,538,355	+		Pf1N1B4_2225	0.82	+0.3
2,538,355	+		Pf1N1B4_2225	0.82	-0.4
2,538,356	-		Pf1N1B4_2225	0.83	-1.5
2,538,356	-		Pf1N1B4_2225	0.83	+0.7
2,538,356	-		Pf1N1B4_2225	0.83	+0.9
2,538,356	-		Pf1N1B4_2225	0.83	+1.3
2,538,356	-		Pf1N1B4_2225	0.83	+0.2
2,538,356	-		Pf1N1B4_2225	0.83	-1.4
2,538,356	-		Pf1N1B4_2225	0.83	+0.5