Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08600

Experiment: no_plant_rhizosphere sample 2; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no_plant_rhizosphere sample 2; outgrowth in LB
1,828,472	+		ABZR87_RS08595	0.85	+0.5
1,828,472	+		ABZR87_RS08595	0.85	+1.2
1,828,473	-		ABZR87_RS08595	0.85	-0.0
1,828,509	+		ABZR87_RS08595	0.86	-1.6
1,828,509	+		ABZR87_RS08595	0.86	-0.2
1,828,509	+		ABZR87_RS08595	0.86	+1.8
1,828,510	-		ABZR87_RS08595	0.86	+1.0
1,828,510	-		ABZR87_RS08595	0.86	-1.2
1,828,510	-		ABZR87_RS08595	0.86	+0.5
1,828,575	+		ABZR87_RS08595	0.87	+1.5
1,828,575	+		ABZR87_RS08595	0.87	-1.5
1,828,576	-		ABZR87_RS08595	0.87	-2.3
1,828,576	-		ABZR87_RS08595	0.87	+0.2
1,828,576	-		ABZR87_RS08595	0.87	-2.2
1,828,576	-		ABZR87_RS08595	0.87	+0.8
1,828,623	+		ABZR87_RS08595	0.88	-1.8
1,828,623	+		ABZR87_RS08595	0.88	+0.2
1,828,623	+		ABZR87_RS08595	0.88	-0.4
1,828,623	+		ABZR87_RS08595	0.88	-0.2
1,828,624	-		ABZR87_RS08595	0.88	-1.8
1,828,674	+		ABZR87_RS08595	0.89	-2.2
1,828,675	-		ABZR87_RS08595	0.89	-0.1
1,828,675	-		ABZR87_RS08595	0.89	-1.8
1,828,842	+				-1.2
1,828,842	+				+0.6
1,828,842	+				+0.2
1,828,842	+				-3.3
1,828,842	+				-0.1
1,828,842	+				-1.7
1,828,843	-				+0.5
1,828,843	-				-0.9
1,828,843	-				-2.0
1,828,843	-				-2.0
1,828,843	-				-0.7
1,829,176	+				-0.7
1,829,176	+				-0.2
1,829,177	-				+1.1
1,829,229	-				-4.1
1,829,285	+				-2.4
1,829,293	-				-0.5
1,829,510	+				-0.0
1,829,564	+				+0.2
1,829,564	+				-0.6
1,829,564	+				-0.1
1,829,599	+		ABZR87_RS08600	0.10	-0.3
1,829,599	+		ABZR87_RS08600	0.10	-0.0
1,829,599	+		ABZR87_RS08600	0.10	-0.7
1,829,599	+		ABZR87_RS08600	0.10	+0.5
1,829,599	+		ABZR87_RS08600	0.10	-0.2
1,829,599	+		ABZR87_RS08600	0.10	+0.6
1,829,599	+		ABZR87_RS08600	0.10	+0.9
1,829,600	-		ABZR87_RS08600	0.10	-1.0
1,829,600	-		ABZR87_RS08600	0.10	+1.3
1,829,600	-		ABZR87_RS08600	0.10	-0.2
1,829,600	-		ABZR87_RS08600	0.10	+0.3
1,829,600	-		ABZR87_RS08600	0.10	-0.6
1,829,633	+		ABZR87_RS08600	0.13	+0.5
1,829,633	+		ABZR87_RS08600	0.13	-2.1
1,829,633	+		ABZR87_RS08600	0.13	-2.2
1,829,633	+		ABZR87_RS08600	0.13	-0.2
1,829,633	+		ABZR87_RS08600	0.13	+0.3
1,829,633	+		ABZR87_RS08600	0.13	-1.7
1,829,633	+		ABZR87_RS08600	0.13	-0.4
1,829,633	+		ABZR87_RS08600	0.13	+0.4
1,829,633	+		ABZR87_RS08600	0.13	+0.6
1,829,633	+		ABZR87_RS08600	0.13	-0.1
1,829,633	+		ABZR87_RS08600	0.13	-2.5
1,829,634	-		ABZR87_RS08600	0.13	-0.7
1,829,634	-		ABZR87_RS08600	0.13	-1.5
1,829,634	-		ABZR87_RS08600	0.13	+0.5
1,829,634	-		ABZR87_RS08600	0.13	-0.4
1,829,634	-		ABZR87_RS08600	0.13	-0.7
1,829,634	-		ABZR87_RS08600	0.13	+0.8
1,829,634	-		ABZR87_RS08600	0.13	+0.5
1,829,634	-		ABZR87_RS08600	0.13	-0.3
1,829,634	-		ABZR87_RS08600	0.13	+2.2
1,829,666	+		ABZR87_RS08600	0.15	-0.8
1,829,666	+		ABZR87_RS08600	0.15	-0.6
1,829,667	-		ABZR87_RS08600	0.15	-0.3
1,829,825	+		ABZR87_RS08600	0.25	-0.2
1,829,826	-		ABZR87_RS08600	0.25	-1.7
1,829,906	+		ABZR87_RS08600	0.30	-0.0
1,829,906	+		ABZR87_RS08600	0.30	+0.2
1,829,906	+		ABZR87_RS08600	0.30	+0.3
1,829,906	+		ABZR87_RS08600	0.30	+0.6
1,829,906	+		ABZR87_RS08600	0.30	-0.2
1,829,906	+		ABZR87_RS08600	0.30	+2.5
1,829,907	-		ABZR87_RS08600	0.30	-0.2
1,829,907	-		ABZR87_RS08600	0.30	+0.6
1,829,907	-		ABZR87_RS08600	0.30	-1.4
1,829,907	-		ABZR87_RS08600	0.30	-0.7
1,830,086	+		ABZR87_RS08600	0.42	+1.2
1,830,086	+		ABZR87_RS08600	0.42	+1.3
1,830,086	+		ABZR87_RS08600	0.42	+0.3
1,830,086	+		ABZR87_RS08600	0.42	-0.7
1,830,086	+		ABZR87_RS08600	0.42	-0.6
1,830,087	-		ABZR87_RS08600	0.42	+0.2
1,830,089	-		ABZR87_RS08600	0.42	+1.2
1,830,215	+		ABZR87_RS08600	0.50	-0.2
1,830,215	+		ABZR87_RS08600	0.50	+0.8
1,830,215	+		ABZR87_RS08600	0.50	-0.8
1,830,215	+		ABZR87_RS08600	0.50	+0.8
1,830,215	+		ABZR87_RS08600	0.50	+0.9
1,830,216	-		ABZR87_RS08600	0.50	-0.7
1,830,216	-		ABZR87_RS08600	0.50	-0.0
1,830,216	-		ABZR87_RS08600	0.50	-2.1
1,830,216	-		ABZR87_RS08600	0.50	-2.5
1,830,216	-		ABZR87_RS08600	0.50	-0.8
1,830,216	-		ABZR87_RS08600	0.50	-0.2
1,830,257	+		ABZR87_RS08600	0.53	-0.6
1,830,257	+		ABZR87_RS08600	0.53	-0.9
1,830,258	-		ABZR87_RS08600	0.53	-0.0
1,830,375	+		ABZR87_RS08600	0.60	+0.1
1,830,375	+		ABZR87_RS08600	0.60	-0.7
1,830,375	+		ABZR87_RS08600	0.60	-0.0
1,830,375	+		ABZR87_RS08600	0.60	-0.2
1,830,376	-		ABZR87_RS08600	0.60	+0.5
1,830,376	-		ABZR87_RS08600	0.60	+0.7
1,830,376	-		ABZR87_RS08600	0.60	-0.6
1,830,376	-		ABZR87_RS08600	0.60	+0.1
1,830,419	+		ABZR87_RS08600	0.63	-0.1
1,830,434	+		ABZR87_RS08600	0.64	-1.4
1,830,434	+		ABZR87_RS08600	0.64	+0.8
1,830,434	+		ABZR87_RS08600	0.64	-1.2
1,830,482	+		ABZR87_RS08600	0.67	+0.6
1,830,482	+		ABZR87_RS08600	0.67	+1.2
1,830,483	-		ABZR87_RS08600	0.67	+0.8
1,830,483	-		ABZR87_RS08600	0.67	-0.2
1,830,854	+				+0.3
1,830,854	+				+0.5
1,830,854	+				-2.5
1,830,854	+				-0.5
1,830,854	+				-0.6
1,830,854	+				-0.3
1,830,855	-				-1.7
1,830,855	-				-0.6
1,830,855	-				-1.5
1,830,855	-				-0.9
1,830,881	+				+0.7
1,830,881	+				-0.9
1,830,881	+				-0.4
1,830,882	-				-1.4
1,830,882	-				-0.1
1,830,962	+				+0.5
1,830,962	+				-1.3
1,830,962	+				+2.2
1,830,962	+				+0.3
1,830,962	+				-0.5
1,830,962	+				-1.2
1,830,963	-				-1.3
1,830,963	-				-0.5
1,830,963	-				-0.5
1,830,963	-				+2.3
1,830,963	-				-1.1
1,831,015	+				-0.3
1,831,016	-				+1.0
1,831,016	-				-0.4
1,831,016	-				-0.6
1,831,030	+				+0.0
1,831,030	+				-0.7
1,831,031	-				-0.1
1,831,139	+				-1.1
1,831,140	-				-1.2
1,831,140	-				+0.1
1,831,170	+		ABZR87_RS08605	0.13	+0.9
1,831,171	-		ABZR87_RS08605	0.13	-1.0
1,831,171	-		ABZR87_RS08605	0.13	+0.8
1,831,171	-		ABZR87_RS08605	0.13	-1.0
1,831,171	-		ABZR87_RS08605	0.13	+0.0
1,831,259	+		ABZR87_RS08605	0.25	-0.4
1,831,260	-		ABZR87_RS08605	0.25	+0.1
1,831,341	-		ABZR87_RS08605	0.36	+2.1
1,831,341	-		ABZR87_RS08605	0.36	-1.1
1,831,341	-		ABZR87_RS08605	0.36	+1.0
1,831,487	+		ABZR87_RS08605	0.55	+0.3
1,831,487	+		ABZR87_RS08605	0.55	-1.2
1,831,487	+		ABZR87_RS08605	0.55	-0.3
1,831,487	+		ABZR87_RS08605	0.55	-1.5
1,831,488	-		ABZR87_RS08605	0.56	+0.7
1,831,488	-		ABZR87_RS08605	0.56	+0.5
1,831,488	-		ABZR87_RS08605	0.56	+1.3
1,831,488	-		ABZR87_RS08605	0.56	-0.4
1,831,488	-		ABZR87_RS08605	0.56	-1.3
1,831,488	-		ABZR87_RS08605	0.56	-1.0
1,831,600	-		ABZR87_RS08605	0.71	-0.2
1,831,640	+		ABZR87_RS08605	0.76	-1.1
1,831,640	+		ABZR87_RS08605	0.76	-0.6
1,831,640	+		ABZR87_RS08605	0.76	-1.7
1,831,640	+		ABZR87_RS08605	0.76	+0.5
1,831,641	-		ABZR87_RS08605	0.76	-1.1
1,831,641	-		ABZR87_RS08605	0.76	-1.3
1,831,641	-		ABZR87_RS08605	0.76	-1.2
1,831,641	-		ABZR87_RS08605	0.76	-2.5
1,831,641	-		ABZR87_RS08605	0.76	-0.7
1,831,916	+				-1.0