Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06410

Experiment: no_plant_rhizosphere sample 2; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no_plant_rhizosphere sample 2; outgrowth in LB
1,364,521	+				+6.3
1,364,521	+				+7.8
1,364,521	+				+6.8
1,364,522	-				+4.3
1,364,522	-				+1.2
1,364,522	-				-0.5
1,364,522	-				+0.6
1,364,522	-				-1.4
1,364,522	-				-2.1
1,364,576	-				+0.2
1,364,589	+				-1.2
1,364,717	+				-1.0
1,364,718	-				-1.4
1,364,718	-				-1.3
1,364,734	-				-0.1
1,364,812	-				-1.6
1,364,812	-				+0.2
1,364,818	+				+0.6
1,364,818	+				+1.1
1,364,818	+				-0.2
1,364,818	+				+0.0
1,364,818	+				-0.0
1,364,818	+				-0.8
1,364,819	-				-0.0
1,364,819	-				+0.1
1,364,819	-				-2.3
1,364,819	-				-2.5
1,364,819	-				-0.4
1,364,819	-				-0.4
1,364,879	+		ABZR87_RS06405	0.15	-0.9
1,365,187	+		ABZR87_RS06405	0.87	+0.9
1,365,327	+				-1.7
1,365,327	+				+0.3
1,365,327	+				-1.8
1,365,328	-				-0.4
1,365,328	-				-1.7
1,365,328	-				-0.4
1,365,328	-				-1.7
1,365,328	-				-0.5
1,365,328	-				+0.4
1,365,328	-				-0.5
1,365,328	-				-0.2
1,365,353	+				-1.4
1,365,362	+				-1.0
1,365,362	+				-1.9
1,365,362	+				-1.3
1,365,362	+				-1.2
1,365,363	-				+0.7
1,365,363	-				-0.2
1,365,363	-				-0.7
1,365,363	-				+1.5
1,365,372	+				-0.8
1,365,372	+				+1.2
1,365,372	+				+0.4
1,365,372	+				+1.3
1,365,373	-				+4.8
1,365,373	-				-0.9
1,365,373	-				+1.3
1,365,373	-				-2.3
1,365,377	+				-0.6
1,365,377	+				-0.6
1,365,378	-				+1.3
1,365,378	-				-2.2
1,365,378	-				+0.6
1,365,378	-				+2.0
1,365,436	-				-0.4
1,365,436	-				+0.8
1,365,464	+				-0.1
1,365,464	+				-1.0
1,365,465	-				+1.1
1,365,465	-				-1.8
1,365,586	+				+1.4
1,365,586	+				-0.7
1,365,586	+				+0.7
1,365,586	+				-0.8
1,365,586	+				+0.0
1,365,586	+				+0.2
1,365,587	-				+2.0
1,365,587	-				-2.6
1,365,587	-				-0.1
1,365,587	-				-0.7
1,365,587	-				-0.3
1,365,610	+				-0.8
1,365,610	+				-1.0
1,365,610	+				-0.4
1,365,610	+				+1.8
1,365,610	+				+0.8
1,365,610	+				+1.1
1,365,610	+				-2.3
1,365,611	-				-0.8
1,365,611	-				-0.8
1,365,611	-				-1.2
1,365,734	-				-0.9
1,365,760	+		ABZR87_RS06410	0.10	+0.8
1,365,760	+		ABZR87_RS06410	0.10	+0.3
1,365,760	+		ABZR87_RS06410	0.10	+0.1
1,365,761	-		ABZR87_RS06410	0.10	-1.8
1,365,761	-		ABZR87_RS06410	0.10	+0.6
1,365,808	+		ABZR87_RS06410	0.12	-0.9
1,365,808	+		ABZR87_RS06410	0.12	+0.9
1,365,809	-		ABZR87_RS06410	0.12	+0.8
1,365,828	+		ABZR87_RS06410	0.13	+0.1
1,365,901	+		ABZR87_RS06410	0.15	-0.3
1,365,902	-		ABZR87_RS06410	0.15	+0.8
1,365,979	+		ABZR87_RS06410	0.18	+0.2
1,365,979	+		ABZR87_RS06410	0.18	-0.3
1,365,980	-		ABZR87_RS06410	0.18	+0.0
1,366,123	+		ABZR87_RS06410	0.24	-1.8
1,366,152	-		ABZR87_RS06410	0.25	-0.1
1,366,336	+		ABZR87_RS06410	0.31	+1.5
1,366,336	+		ABZR87_RS06410	0.31	+0.4
1,366,336	+		ABZR87_RS06410	0.31	+0.3
1,366,360	+		ABZR87_RS06410	0.32	+0.5
1,366,360	+		ABZR87_RS06410	0.32	+0.2
1,366,361	-		ABZR87_RS06410	0.32	-0.9
1,366,361	-		ABZR87_RS06410	0.32	-0.6
1,366,361	-		ABZR87_RS06410	0.32	+1.4
1,366,408	+		ABZR87_RS06410	0.34	+1.2
1,366,408	+		ABZR87_RS06410	0.34	+0.4
1,366,408	+		ABZR87_RS06410	0.34	-0.3
1,366,408	+		ABZR87_RS06410	0.34	-1.1
1,366,408	+		ABZR87_RS06410	0.34	+8.6
1,366,408	+		ABZR87_RS06410	0.34	-1.5
1,366,409	-		ABZR87_RS06410	0.34	+0.5
1,366,409	-		ABZR87_RS06410	0.34	+0.1
1,366,508	-		ABZR87_RS06410	0.38	-0.5
1,366,531	+		ABZR87_RS06410	0.39	-0.1
1,366,531	+		ABZR87_RS06410	0.39	+0.3
1,366,532	-		ABZR87_RS06410	0.39	+0.6
1,366,532	-		ABZR87_RS06410	0.39	+0.2
1,366,600	+		ABZR87_RS06410	0.41	+0.4
1,366,600	+		ABZR87_RS06410	0.41	-0.6
1,366,618	+		ABZR87_RS06410	0.42	+0.8
1,366,618	+		ABZR87_RS06410	0.42	+0.5
1,366,619	-		ABZR87_RS06410	0.42	+0.1
1,366,643	+		ABZR87_RS06410	0.43	+1.1
1,366,703	-		ABZR87_RS06410	0.45	-1.1
1,366,733	-		ABZR87_RS06410	0.46	-1.1
1,366,733	-		ABZR87_RS06410	0.46	+1.4
1,366,757	+		ABZR87_RS06410	0.47	-2.6
1,366,820	+		ABZR87_RS06410	0.49	+1.2
1,366,821	-		ABZR87_RS06410	0.49	+0.6
1,366,821	-		ABZR87_RS06410	0.49	-0.4
1,367,191	+		ABZR87_RS06410	0.63	+0.9
1,367,191	+		ABZR87_RS06410	0.63	-1.7
1,367,192	-		ABZR87_RS06410	0.63	+2.1
1,367,192	-		ABZR87_RS06410	0.63	-2.2
1,367,290	+		ABZR87_RS06410	0.66	+0.6
1,367,290	+		ABZR87_RS06410	0.66	+1.1
1,367,290	+		ABZR87_RS06410	0.66	+0.1
1,367,290	+		ABZR87_RS06410	0.66	+2.7
1,367,291	-		ABZR87_RS06410	0.67	-1.8
1,367,389	+		ABZR87_RS06410	0.70	+0.4
1,367,390	-		ABZR87_RS06410	0.70	-0.9
1,367,446	+		ABZR87_RS06410	0.72	-0.6
1,367,446	+		ABZR87_RS06410	0.72	-2.9
1,367,446	+		ABZR87_RS06410	0.72	-1.2
1,367,447	-		ABZR87_RS06410	0.72	-0.8
1,367,447	-		ABZR87_RS06410	0.72	+1.1
1,367,449	+		ABZR87_RS06410	0.72	-0.2
1,367,449	+		ABZR87_RS06410	0.72	+0.7
1,367,450	-		ABZR87_RS06410	0.72	-0.6
1,367,590	+		ABZR87_RS06410	0.78	-0.2
1,367,590	+		ABZR87_RS06410	0.78	-1.6
1,367,590	+		ABZR87_RS06410	0.78	+1.3
1,367,590	+		ABZR87_RS06410	0.78	+0.9
1,367,590	+		ABZR87_RS06410	0.78	-0.5
1,367,590	+		ABZR87_RS06410	0.78	-0.4
1,367,590	+		ABZR87_RS06410	0.78	-2.3
1,367,590	+		ABZR87_RS06410	0.78	-1.0
1,367,590	+		ABZR87_RS06410	0.78	+0.1
1,367,590	+		ABZR87_RS06410	0.78	-3.5
1,367,590	+		ABZR87_RS06410	0.78	-1.0
1,367,590	+		ABZR87_RS06410	0.78	-0.4
1,367,590	+		ABZR87_RS06410	0.78	+1.9
1,367,590	+		ABZR87_RS06410	0.78	-0.1
1,367,591	-		ABZR87_RS06410	0.78	-0.5
1,367,591	-		ABZR87_RS06410	0.78	-0.1
1,367,591	-		ABZR87_RS06410	0.78	-0.5
1,367,591	-		ABZR87_RS06410	0.78	+1.2
1,367,591	-		ABZR87_RS06410	0.78	-0.8
1,367,591	-		ABZR87_RS06410	0.78	+0.2
1,367,591	-		ABZR87_RS06410	0.78	-0.4
1,367,690	-		ABZR87_RS06410	0.81	-0.3
1,367,690	-		ABZR87_RS06410	0.81	-1.1
1,367,777	-		ABZR87_RS06410	0.84	+1.5
1,367,777	-		ABZR87_RS06410	0.84	-1.8
1,367,777	-		ABZR87_RS06410	0.84	-1.7
1,368,230	+				+0.7
1,368,230	+				-0.9
1,368,230	+				-0.4
1,368,272	+		ABZR87_RS06415	0.16	-0.1
1,368,272	+		ABZR87_RS06415	0.16	+0.2
1,368,272	+		ABZR87_RS06415	0.16	+0.3
1,368,273	-		ABZR87_RS06415	0.16	+0.2
1,368,273	-		ABZR87_RS06415	0.16	-2.5
1,368,273	-		ABZR87_RS06415	0.16	+0.7
1,368,273	-		ABZR87_RS06415	0.16	-0.4
1,368,285	+		ABZR87_RS06415	0.19	+1.0
1,368,286	-		ABZR87_RS06415	0.19	-0.7
1,368,374	+		ABZR87_RS06415	0.44	+0.9
1,368,374	+		ABZR87_RS06415	0.44	+0.1
1,368,374	+		ABZR87_RS06415	0.44	-1.0
1,368,374	+		ABZR87_RS06415	0.44	+0.0
1,368,374	+		ABZR87_RS06415	0.44	-0.3
1,368,375	-		ABZR87_RS06415	0.45	+0.5
1,368,375	-		ABZR87_RS06415	0.45	-0.2
1,368,375	-		ABZR87_RS06415	0.45	-0.1
1,368,375	-		ABZR87_RS06415	0.45	+1.2
1,368,455	+		ABZR87_RS06415	0.67	+0.1
1,368,501	-		ABZR87_RS06415	0.80	-0.0
1,368,501	-		ABZR87_RS06415	0.80	+0.8
1,368,589	-				-1.0
1,368,589	-				+0.0
1,368,589	-				+0.4
1,368,790	-		ABZR87_RS06420	0.21	-0.8
1,368,834	+		ABZR87_RS06420	0.25	-0.4
1,368,834	+		ABZR87_RS06420	0.25	+1.7
1,368,835	-		ABZR87_RS06420	0.25	-3.4
1,368,835	-		ABZR87_RS06420	0.25	+0.9
1,368,835	-		ABZR87_RS06420	0.25	+1.0
1,368,835	-		ABZR87_RS06420	0.25	-0.8
1,368,835	-		ABZR87_RS06420	0.25	+1.1
1,368,835	-		ABZR87_RS06420	0.25	-0.4
1,369,073	+		ABZR87_RS06420	0.48	+0.3
1,369,073	+		ABZR87_RS06420	0.48	-0.8
1,369,073	+		ABZR87_RS06420	0.48	-1.1
1,369,073	+		ABZR87_RS06420	0.48	-0.9
1,369,073	+		ABZR87_RS06420	0.48	-3.0
1,369,073	+		ABZR87_RS06420	0.48	-0.6
1,369,074	-		ABZR87_RS06420	0.48	-0.2
1,369,074	-		ABZR87_RS06420	0.48	+0.9
1,369,113	+		ABZR87_RS06420	0.52	+0.0
1,369,113	+		ABZR87_RS06420	0.52	+1.0
1,369,114	-		ABZR87_RS06420	0.52	+0.4
1,369,114	-		ABZR87_RS06420	0.52	-1.4
1,369,114	-		ABZR87_RS06420	0.52	-0.1
1,369,114	-		ABZR87_RS06420	0.52	+0.4
1,369,114	-		ABZR87_RS06420	0.52	+0.4
1,369,116	+		ABZR87_RS06420	0.52	-0.1
1,369,116	+		ABZR87_RS06420	0.52	+0.6
1,369,116	+		ABZR87_RS06420	0.52	-0.3
1,369,116	+		ABZR87_RS06420	0.52	-0.5
1,369,116	+		ABZR87_RS06420	0.52	-1.8
1,369,116	+		ABZR87_RS06420	0.52	+1.4
1,369,116	+		ABZR87_RS06420	0.52	+0.8
1,369,116	+		ABZR87_RS06420	0.52	-0.4
1,369,117	-		ABZR87_RS06420	0.52	-0.8
1,369,117	-		ABZR87_RS06420	0.52	-1.1
1,369,117	-		ABZR87_RS06420	0.52	+0.6
1,369,117	-		ABZR87_RS06420	0.52	-1.6