Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS16600

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
3,745,047	-		ABZR86_RS16590	0.74	-0.1
3,745,107	+		ABZR86_RS16590	0.81	+1.0
3,745,107	+		ABZR86_RS16590	0.81	-0.1
3,745,233	+				-0.3
3,745,233	+				+1.0
3,745,234	-				+0.4
3,745,266	+				-0.1
3,745,267	-				-0.2
3,745,267	-				+0.9
3,745,301	-				-1.4
3,745,301	-				+0.6
3,745,338	+		ABZR86_RS16595	0.14	+0.3
3,745,339	-		ABZR86_RS16595	0.14	+0.1
3,745,339	-		ABZR86_RS16595	0.14	-2.6
3,745,398	-		ABZR86_RS16595	0.28	+0.6
3,745,419	+		ABZR86_RS16595	0.33	+0.5
3,745,420	-		ABZR86_RS16595	0.33	-1.1
3,745,523	+		ABZR86_RS16595	0.57	+0.5
3,745,752	-				+2.0
3,745,755	+				+1.5
3,745,756	-				-0.0
3,745,795	+				-0.1
3,745,837	+				-0.4
3,745,837	+				-2.7
3,746,113	+				-3.4
3,746,114	-				+0.2
3,746,189	-				-0.0
3,746,189	-				+0.1
3,746,308	+				+0.5
3,746,404	+				-0.7
3,746,405	-				-0.4
3,746,405	-				+0.1
3,746,476	+				+0.8
3,746,476	+				-0.9
3,746,477	-				+0.2
3,746,477	-				-0.3
3,746,506	+				-0.1
3,746,506	+				+1.2
3,746,506	+				+0.1
3,746,506	+				+0.1
3,746,507	-				-0.5
3,746,507	-				+0.4
3,746,714	-		ABZR86_RS16600	0.12	-0.1
3,746,714	-		ABZR86_RS16600	0.12	-0.5
3,746,765	-		ABZR86_RS16600	0.13	-3.1
3,746,872	+		ABZR86_RS16600	0.15	+0.4
3,746,872	+		ABZR86_RS16600	0.15	-0.6
3,746,872	+		ABZR86_RS16600	0.15	-0.1
3,746,873	-		ABZR86_RS16600	0.15	+0.2
3,746,873	-		ABZR86_RS16600	0.15	-1.9
3,746,873	-		ABZR86_RS16600	0.15	-0.7
3,746,873	-		ABZR86_RS16600	0.15	+0.8
3,746,873	-		ABZR86_RS16600	0.15	+0.1
3,746,873	-		ABZR86_RS16600	0.15	-0.0
3,746,878	+		ABZR86_RS16600	0.15	-1.4
3,746,879	-		ABZR86_RS16600	0.15	-0.4
3,746,879	-		ABZR86_RS16600	0.15	-0.6
3,746,941	+		ABZR86_RS16600	0.16	+0.5
3,746,998	+		ABZR86_RS16600	0.17	-2.9
3,746,998	+		ABZR86_RS16600	0.17	-0.6
3,746,998	+		ABZR86_RS16600	0.17	-0.8
3,746,999	-		ABZR86_RS16600	0.17	+0.0
3,746,999	-		ABZR86_RS16600	0.17	+0.3
3,746,999	-		ABZR86_RS16600	0.17	-0.7
3,746,999	-		ABZR86_RS16600	0.17	-1.1
3,746,999	-		ABZR86_RS16600	0.17	+0.4
3,747,000	+		ABZR86_RS16600	0.17	-1.6
3,747,001	-		ABZR86_RS16600	0.17	+0.7
3,747,013	-		ABZR86_RS16600	0.17	+0.0
3,747,065	-		ABZR86_RS16600	0.18	-0.8
3,747,070	+		ABZR86_RS16600	0.18	-0.1
3,747,071	-		ABZR86_RS16600	0.18	+0.7
3,747,198	+		ABZR86_RS16600	0.20	-0.5
3,747,199	-		ABZR86_RS16600	0.20	+1.0
3,747,199	-		ABZR86_RS16600	0.20	-0.7
3,747,208	+		ABZR86_RS16600	0.20	-2.1
3,747,208	+		ABZR86_RS16600	0.20	-0.7
3,747,208	+		ABZR86_RS16600	0.20	+0.1
3,747,209	-		ABZR86_RS16600	0.20	+0.5
3,747,209	-		ABZR86_RS16600	0.20	+0.2
3,747,209	-		ABZR86_RS16600	0.20	+0.1
3,747,313	+		ABZR86_RS16600	0.22	+0.4
3,747,313	+		ABZR86_RS16600	0.22	-1.1
3,747,314	-		ABZR86_RS16600	0.22	+0.4
3,747,314	-		ABZR86_RS16600	0.22	-0.0
3,747,431	-		ABZR86_RS16600	0.24	-0.1
3,747,431	-		ABZR86_RS16600	0.24	+1.6
3,747,554	-		ABZR86_RS16600	0.26	-0.3
3,747,589	+		ABZR86_RS16600	0.27	+0.2
3,747,593	-		ABZR86_RS16600	0.27	+1.4
3,747,641	-		ABZR86_RS16600	0.28	-0.2
3,747,765	+		ABZR86_RS16600	0.30	-0.9
3,747,765	+		ABZR86_RS16600	0.30	-0.5
3,747,765	+		ABZR86_RS16600	0.30	-0.1
3,747,765	+		ABZR86_RS16600	0.30	+0.6
3,747,769	+		ABZR86_RS16600	0.30	+0.0
3,747,769	+		ABZR86_RS16600	0.30	+0.8
3,747,769	+		ABZR86_RS16600	0.30	-0.4
3,747,769	+		ABZR86_RS16600	0.30	-0.4
3,747,769	+		ABZR86_RS16600	0.30	-0.1
3,747,769	+		ABZR86_RS16600	0.30	-0.4
3,747,770	-		ABZR86_RS16600	0.30	+0.7
3,747,770	-		ABZR86_RS16600	0.30	+0.7
3,747,770	-		ABZR86_RS16600	0.30	+0.6
3,747,770	-		ABZR86_RS16600	0.30	-0.9
3,747,826	+		ABZR86_RS16600	0.31	-0.6
3,747,826	+		ABZR86_RS16600	0.31	-0.4
3,747,958	+		ABZR86_RS16600	0.33	-1.4
3,747,958	+		ABZR86_RS16600	0.33	+0.4
3,747,958	+		ABZR86_RS16600	0.33	+0.9
3,747,958	+		ABZR86_RS16600	0.33	+0.5
3,748,019	-		ABZR86_RS16600	0.34	-0.7
3,748,019	-		ABZR86_RS16600	0.34	+0.2
3,748,066	-		ABZR86_RS16600	0.35	-0.9
3,748,169	+		ABZR86_RS16600	0.37	+0.0
3,748,208	-		ABZR86_RS16600	0.37	-0.2
3,748,208	-		ABZR86_RS16600	0.37	-0.3
3,748,208	-		ABZR86_RS16600	0.37	-0.4
3,748,213	+		ABZR86_RS16600	0.37	+0.4
3,748,213	+		ABZR86_RS16600	0.37	-1.2
3,748,246	+		ABZR86_RS16600	0.38	+0.4
3,748,246	+		ABZR86_RS16600	0.38	+0.3
3,748,246	+		ABZR86_RS16600	0.38	+0.3
3,748,247	-		ABZR86_RS16600	0.38	+0.1
3,748,291	+		ABZR86_RS16600	0.39	+0.5
3,748,291	+		ABZR86_RS16600	0.39	-0.5
3,748,292	-		ABZR86_RS16600	0.39	-0.1
3,748,292	-		ABZR86_RS16600	0.39	+0.7
3,748,292	-		ABZR86_RS16600	0.39	+0.5
3,748,292	-		ABZR86_RS16600	0.39	+1.4
3,748,292	-		ABZR86_RS16600	0.39	+0.0
3,748,298	-		ABZR86_RS16600	0.39	-0.2
3,748,298	-		ABZR86_RS16600	0.39	+0.6
3,748,298	-		ABZR86_RS16600	0.39	-0.6
3,748,345	-		ABZR86_RS16600	0.40	-0.4
3,748,378	+		ABZR86_RS16600	0.40	-1.9
3,748,379	-		ABZR86_RS16600	0.40	+0.1
3,748,552	+		ABZR86_RS16600	0.43	-0.0
3,748,624	+		ABZR86_RS16600	0.44	+0.5
3,748,667	-		ABZR86_RS16600	0.45	+0.8
3,748,667	-		ABZR86_RS16600	0.45	-0.7
3,748,684	+		ABZR86_RS16600	0.45	-0.4
3,748,684	+		ABZR86_RS16600	0.45	+0.6
3,748,685	-		ABZR86_RS16600	0.45	-0.8
3,748,685	-		ABZR86_RS16600	0.45	-0.1
3,748,829	+		ABZR86_RS16600	0.48	-0.0
3,748,830	-		ABZR86_RS16600	0.48	-0.7
3,748,855	+		ABZR86_RS16600	0.48	-0.8
3,748,856	-		ABZR86_RS16600	0.48	-1.1
3,748,875	+		ABZR86_RS16600	0.49	-1.2
3,748,910	-		ABZR86_RS16600	0.49	-0.1
3,749,010	+		ABZR86_RS16600	0.51	+0.1
3,749,014	+		ABZR86_RS16600	0.51	+0.1
3,749,014	+		ABZR86_RS16600	0.51	+0.5
3,749,015	-		ABZR86_RS16600	0.51	-0.3
3,749,074	+		ABZR86_RS16600	0.52	+0.2
3,749,074	+		ABZR86_RS16600	0.52	+1.3
3,749,075	-		ABZR86_RS16600	0.52	-0.1
3,749,075	-		ABZR86_RS16600	0.52	-1.2
3,749,075	-		ABZR86_RS16600	0.52	-0.6
3,749,075	-		ABZR86_RS16600	0.52	-0.1
3,749,080	+		ABZR86_RS16600	0.52	-0.1
3,749,125	+		ABZR86_RS16600	0.53	-0.4
3,749,126	-		ABZR86_RS16600	0.53	-2.5
3,749,209	+		ABZR86_RS16600	0.54	-1.1
3,749,209	+		ABZR86_RS16600	0.54	+1.3
3,749,210	-		ABZR86_RS16600	0.54	-0.1
3,749,315	-		ABZR86_RS16600	0.56	+0.7
3,749,315	-		ABZR86_RS16600	0.56	-0.8
3,749,315	-		ABZR86_RS16600	0.56	+0.7
3,749,315	-		ABZR86_RS16600	0.56	-0.4
3,749,315	-		ABZR86_RS16600	0.56	+1.3
3,749,332	+		ABZR86_RS16600	0.56	-1.4
3,749,332	+		ABZR86_RS16600	0.56	+0.3
3,749,335	+		ABZR86_RS16600	0.56	-0.2
3,749,361	+		ABZR86_RS16600	0.57	+0.2
3,749,362	-		ABZR86_RS16600	0.57	+0.7
3,749,362	-		ABZR86_RS16600	0.57	-0.8
3,749,362	-		ABZR86_RS16600	0.57	+0.0
3,749,362	-		ABZR86_RS16600	0.57	-0.2
3,749,365	+		ABZR86_RS16600	0.57	-2.1
3,749,366	-		ABZR86_RS16600	0.57	+0.4
3,749,366	-		ABZR86_RS16600	0.57	+0.4
3,749,366	-		ABZR86_RS16600	0.57	+0.4
3,749,428	+		ABZR86_RS16600	0.58	-0.0
3,749,428	+		ABZR86_RS16600	0.58	-0.2
3,749,465	-		ABZR86_RS16600	0.59	+0.8
3,749,471	-		ABZR86_RS16600	0.59	-0.5
3,749,471	-		ABZR86_RS16600	0.59	-1.3
3,749,500	-		ABZR86_RS16600	0.59	+0.1
3,749,600	-		ABZR86_RS16600	0.61	-0.2
3,749,606	-		ABZR86_RS16600	0.61	+0.6
3,749,659	+		ABZR86_RS16600	0.62	-0.8
3,749,659	+		ABZR86_RS16600	0.62	-0.9
3,749,660	-		ABZR86_RS16600	0.62	-0.0
3,749,822	-		ABZR86_RS16600	0.65	+1.2
3,749,822	-		ABZR86_RS16600	0.65	+0.2
3,749,884	+		ABZR86_RS16600	0.66	-0.2
3,749,884	+		ABZR86_RS16600	0.66	+0.7
3,749,884	+		ABZR86_RS16600	0.66	+0.1
3,749,884	+		ABZR86_RS16600	0.66	-1.0
3,749,885	-		ABZR86_RS16600	0.66	+0.3
3,749,885	-		ABZR86_RS16600	0.66	-0.4
3,749,887	+		ABZR86_RS16600	0.66	+1.0
3,749,887	+		ABZR86_RS16600	0.66	+0.8
3,749,888	-		ABZR86_RS16600	0.66	+0.6
3,749,888	-		ABZR86_RS16600	0.66	+0.3
3,749,888	-		ABZR86_RS16600	0.66	-0.4
3,749,888	-		ABZR86_RS16600	0.66	-0.3
3,749,893	+		ABZR86_RS16600	0.66	+1.0
3,749,893	+		ABZR86_RS16600	0.66	+0.2
3,749,894	-		ABZR86_RS16600	0.66	-0.3
3,749,918	-		ABZR86_RS16600	0.66	+0.1
3,749,953	+		ABZR86_RS16600	0.67	+0.2
3,749,954	-		ABZR86_RS16600	0.67	-0.2
3,749,954	-		ABZR86_RS16600	0.67	-2.2
3,749,954	-		ABZR86_RS16600	0.67	-1.6
3,749,954	-		ABZR86_RS16600	0.67	-1.0
3,749,959	+		ABZR86_RS16600	0.67	+0.6
3,749,959	+		ABZR86_RS16600	0.67	+0.2
3,749,959	+		ABZR86_RS16600	0.67	+1.8
3,749,960	-		ABZR86_RS16600	0.67	-0.3
3,749,960	-		ABZR86_RS16600	0.67	-0.0
3,750,053	-		ABZR86_RS16600	0.69	+0.7
3,750,148	-		ABZR86_RS16600	0.70	-0.5
3,750,196	+		ABZR86_RS16600	0.71	+0.8
3,750,196	+		ABZR86_RS16600	0.71	+0.0
3,750,196	+		ABZR86_RS16600	0.71	+0.2
3,750,197	-		ABZR86_RS16600	0.71	+1.1
3,750,203	-		ABZR86_RS16600	0.71	+0.4
3,750,358	+		ABZR86_RS16600	0.74	-1.6
3,750,358	+		ABZR86_RS16600	0.74	+0.5
3,750,358	+		ABZR86_RS16600	0.74	+0.1
3,750,412	-		ABZR86_RS16600	0.75	+0.0
3,750,414	+		ABZR86_RS16600	0.75	-0.0
3,750,415	-		ABZR86_RS16600	0.75	+0.7
3,750,457	+		ABZR86_RS16600	0.75	+0.1
3,750,457	+		ABZR86_RS16600	0.75	-0.2
3,750,457	+		ABZR86_RS16600	0.75	+0.6
3,750,457	+		ABZR86_RS16600	0.75	-1.3
3,750,457	+		ABZR86_RS16600	0.75	+0.5
3,750,457	+		ABZR86_RS16600	0.75	-0.1
3,750,458	-		ABZR86_RS16600	0.76	+0.6
3,750,458	-		ABZR86_RS16600	0.76	-0.8
3,750,458	-		ABZR86_RS16600	0.76	-0.1
3,750,458	-		ABZR86_RS16600	0.76	-3.0
3,750,459	+		ABZR86_RS16600	0.76	+0.3
3,750,459	+		ABZR86_RS16600	0.76	+0.3
3,750,459	+		ABZR86_RS16600	0.76	-0.1
3,750,459	+		ABZR86_RS16600	0.76	-0.2
3,750,459	+		ABZR86_RS16600	0.76	+1.3
3,750,459	+		ABZR86_RS16600	0.76	-0.3
3,750,459	+		ABZR86_RS16600	0.76	-2.1
3,750,460	-		ABZR86_RS16600	0.76	+0.2
3,750,460	-		ABZR86_RS16600	0.76	-0.1
3,750,464	-		ABZR86_RS16600	0.76	+1.2
3,750,641	-		ABZR86_RS16600	0.79	+0.3
3,750,688	+		ABZR86_RS16600	0.79	+1.8
3,750,688	+		ABZR86_RS16600	0.79	+0.9
3,750,688	+		ABZR86_RS16600	0.79	+0.0
3,750,689	-		ABZR86_RS16600	0.79	-0.8
3,750,689	-		ABZR86_RS16600	0.79	+0.1
3,750,689	-		ABZR86_RS16600	0.79	+0.2
3,750,689	-		ABZR86_RS16600	0.79	-0.6
3,750,689	-		ABZR86_RS16600	0.79	+0.6
3,750,739	+		ABZR86_RS16600	0.80	+1.8
3,750,739	+		ABZR86_RS16600	0.80	+2.8
3,750,739	+		ABZR86_RS16600	0.80	+0.4
3,750,740	-		ABZR86_RS16600	0.80	-0.8
3,750,740	-		ABZR86_RS16600	0.80	+0.6
3,750,740	-		ABZR86_RS16600	0.80	+0.4
3,750,740	-		ABZR86_RS16600	0.80	+1.0
3,750,740	-		ABZR86_RS16600	0.80	+0.8
3,750,740	-		ABZR86_RS16600	0.80	+0.2
3,750,769	+		ABZR86_RS16600	0.81	-0.2
3,750,770	-		ABZR86_RS16600	0.81	-0.4
3,750,913	+		ABZR86_RS16600	0.83	-0.2
3,750,913	+		ABZR86_RS16600	0.83	-0.5
3,750,914	-		ABZR86_RS16600	0.83	+0.7
3,750,915	+		ABZR86_RS16600	0.83	-0.5
3,750,915	+		ABZR86_RS16600	0.83	+0.6
3,750,916	-		ABZR86_RS16600	0.83	-0.1
3,750,945	+		ABZR86_RS16600	0.84	-2.9
3,750,945	+		ABZR86_RS16600	0.84	+0.6
3,750,946	-		ABZR86_RS16600	0.84	-0.5
3,751,012	+		ABZR86_RS16600	0.85	-0.7
3,751,012	+		ABZR86_RS16600	0.85	+0.4
3,751,012	+		ABZR86_RS16600	0.85	+0.9
3,751,013	-		ABZR86_RS16600	0.85	-0.4
3,751,297	+		ABZR86_RS16600	0.90	-0.9
3,751,329	+				-0.1
3,751,412	-				-0.4
3,751,450	+				-0.1
3,751,553	-				-0.1
3,751,602	-				+0.1
3,751,634	+				-0.4
3,751,681	+				+1.1
3,751,721	-				+0.7
3,751,766	-				+0.5
3,751,971	-				+0.9
3,751,978	-				-0.7
3,751,978	-				-0.7
3,751,989	-				+0.3
3,751,989	-				+0.3
3,752,054	+		ABZR86_RS16605	0.12	+0.0
3,752,078	-		ABZR86_RS16605	0.15	+0.1
3,752,083	+		ABZR86_RS16605	0.15	+0.3
3,752,083	+		ABZR86_RS16605	0.15	+0.6
3,752,084	-		ABZR86_RS16605	0.16	+0.5
3,752,134	-		ABZR86_RS16605	0.21	+0.6
3,752,134	-		ABZR86_RS16605	0.21	+0.4
3,752,177	+		ABZR86_RS16605	0.26	+1.7
3,752,242	+		ABZR86_RS16605	0.33	-0.2
3,752,243	-		ABZR86_RS16605	0.33	+0.8
3,752,260	+		ABZR86_RS16605	0.35	+0.1
3,752,261	-		ABZR86_RS16605	0.35	-0.1
3,752,261	-		ABZR86_RS16605	0.35	-0.2
3,752,308	-		ABZR86_RS16605	0.40	+0.2
3,752,335	-		ABZR86_RS16605	0.43	-0.5
3,752,516	+		ABZR86_RS16605	0.62	-0.1
3,752,516	+		ABZR86_RS16605	0.62	-0.1
3,752,517	-		ABZR86_RS16605	0.62	-0.0
3,752,517	-		ABZR86_RS16605	0.62	-0.0
3,752,525	-		ABZR86_RS16605	0.63	-2.0
3,752,606	+		ABZR86_RS16605	0.72	+1.0
3,752,652	+		ABZR86_RS16605	0.77	+0.8
3,752,686	-		ABZR86_RS16605	0.80	-0.1
3,752,731	-		ABZR86_RS16605	0.85	-0.3