Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS16200

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
3,657,670	+				+0.4
3,657,671	-				+1.5
3,657,671	-				+0.6
3,657,759	+				+0.4
3,657,759	+				+0.0
3,657,759	+				+0.5
3,657,760	-				+1.6
3,657,841	+		ABZR86_RS16195	0.10	-2.0
3,657,841	+		ABZR86_RS16195	0.10	+2.4
3,657,841	+		ABZR86_RS16195	0.10	+0.3
3,657,841	+		ABZR86_RS16195	0.10	-0.9
3,657,844	-		ABZR86_RS16195	0.10	+0.1
3,657,852	+		ABZR86_RS16195	0.11	+0.7
3,657,853	-		ABZR86_RS16195	0.12	-2.0
3,657,955	-		ABZR86_RS16195	0.24	+0.1
3,657,955	-		ABZR86_RS16195	0.24	-0.7
3,658,125	+		ABZR86_RS16195	0.45	-0.8
3,658,126	-		ABZR86_RS16195	0.45	-0.3
3,658,315	-		ABZR86_RS16195	0.68	-0.4
3,658,422	+		ABZR86_RS16195	0.81	+0.7
3,658,525	-				-0.7
3,658,536	+				-1.0
3,658,537	-				-0.3
3,658,592	-				+0.8
3,658,615	-				+0.7
3,658,646	+				-0.0
3,658,646	+				-0.1
3,658,646	+				+1.0
3,658,646	+				+0.1
3,658,647	-				+0.9
3,658,647	-				+0.7
3,658,647	-				-0.4
3,658,647	-				-0.8
3,658,647	-				+1.5
3,658,647	-				+1.2
3,658,656	+				+0.3
3,658,656	+				-0.2
3,658,656	+				+0.4
3,658,656	+				+0.1
3,658,656	+				-0.3
3,658,656	+				+0.8
3,658,657	-				+0.8
3,658,695	-				+0.1
3,658,973	+		ABZR86_RS16200	0.32	-1.9
3,659,006	+		ABZR86_RS16200	0.35	+1.0
3,659,006	+		ABZR86_RS16200	0.35	-0.8
3,659,006	+		ABZR86_RS16200	0.35	-0.3
3,659,007	-		ABZR86_RS16200	0.35	+0.5
3,659,042	+		ABZR86_RS16200	0.38	+0.5
3,659,043	-		ABZR86_RS16200	0.39	+0.3
3,659,083	+		ABZR86_RS16200	0.43	+0.6
3,659,084	-		ABZR86_RS16200	0.43	-0.1
3,659,201	+		ABZR86_RS16200	0.54	+0.2
3,659,202	-		ABZR86_RS16200	0.55	-0.2
3,659,262	+		ABZR86_RS16200	0.61	+0.6
3,659,262	+		ABZR86_RS16200	0.61	-0.3
3,659,262	+		ABZR86_RS16200	0.61	-0.6
3,659,262	+		ABZR86_RS16200	0.61	-0.4
3,659,285	+		ABZR86_RS16200	0.63	-1.2
3,659,286	-		ABZR86_RS16200	0.63	+0.2
3,659,286	-		ABZR86_RS16200	0.63	+0.7
3,659,288	+		ABZR86_RS16200	0.63	-0.9
3,659,288	+		ABZR86_RS16200	0.63	+0.1
3,659,288	+		ABZR86_RS16200	0.63	+0.2
3,659,288	+		ABZR86_RS16200	0.63	+0.2
3,659,288	+		ABZR86_RS16200	0.63	+1.1
3,659,288	+		ABZR86_RS16200	0.63	+1.2
3,659,288	+		ABZR86_RS16200	0.63	+0.3
3,659,289	-		ABZR86_RS16200	0.63	-0.9
3,659,289	-		ABZR86_RS16200	0.63	-0.7
3,659,289	-		ABZR86_RS16200	0.63	+0.5
3,659,289	-		ABZR86_RS16200	0.63	-0.1
3,659,289	-		ABZR86_RS16200	0.63	+0.8
3,659,289	-		ABZR86_RS16200	0.63	-2.5
3,659,289	-		ABZR86_RS16200	0.63	-0.3
3,659,289	-		ABZR86_RS16200	0.63	-0.7
3,659,348	+		ABZR86_RS16200	0.69	-0.2
3,659,348	+		ABZR86_RS16200	0.69	-0.2
3,659,349	-		ABZR86_RS16200	0.69	+0.6
3,659,349	-		ABZR86_RS16200	0.69	+0.6
3,659,349	-		ABZR86_RS16200	0.69	+0.4
3,659,477	+		ABZR86_RS16200	0.82	+0.4
3,659,477	+		ABZR86_RS16200	0.82	+0.5
3,659,477	+		ABZR86_RS16200	0.82	+0.5
3,659,477	+		ABZR86_RS16200	0.82	+0.4
3,659,477	+		ABZR86_RS16200	0.82	-0.1
3,659,477	+		ABZR86_RS16200	0.82	-0.4
3,659,477	+		ABZR86_RS16200	0.82	+0.1
3,659,478	-		ABZR86_RS16200	0.82	+0.1
3,659,478	-		ABZR86_RS16200	0.82	+1.1
3,659,478	-		ABZR86_RS16200	0.82	+0.1
3,659,478	-		ABZR86_RS16200	0.82	-0.3
3,659,478	-		ABZR86_RS16200	0.82	+0.8
3,659,478	-		ABZR86_RS16200	0.82	-1.9
3,659,478	-		ABZR86_RS16200	0.82	+0.4
3,659,478	-		ABZR86_RS16200	0.82	-0.4
3,659,478	-		ABZR86_RS16200	0.82	+1.7
3,659,486	+		ABZR86_RS16200	0.83	+0.8
3,659,486	+		ABZR86_RS16200	0.83	+0.4
3,659,486	+		ABZR86_RS16200	0.83	+0.8
3,659,486	+		ABZR86_RS16200	0.83	+0.2
3,659,487	-		ABZR86_RS16200	0.83	+0.6
3,659,487	-		ABZR86_RS16200	0.83	+1.1
3,659,487	-		ABZR86_RS16200	0.83	-0.9
3,659,487	-		ABZR86_RS16200	0.83	-1.0
3,659,487	-		ABZR86_RS16200	0.83	+1.0
3,659,573	+				-0.3
3,659,573	+				-0.0
3,659,573	+				+0.2
3,659,574	-				-0.8
3,659,574	-				+0.7
3,659,574	-				+0.6
3,659,574	-				-0.3
3,659,667	-				+0.5
3,659,667	-				-0.1
3,659,712	+				+0.5
3,659,713	-				-0.2
3,659,962	+		ABZR86_RS16205	0.21	+0.3
3,659,962	+		ABZR86_RS16205	0.21	-0.1
3,659,962	+		ABZR86_RS16205	0.21	+0.3
3,659,962	+		ABZR86_RS16205	0.21	-1.1
3,659,962	+		ABZR86_RS16205	0.21	+0.1
3,659,963	-		ABZR86_RS16205	0.21	+0.5
3,659,963	-		ABZR86_RS16205	0.21	-3.0
3,659,963	-		ABZR86_RS16205	0.21	-0.3
3,659,963	-		ABZR86_RS16205	0.21	+0.3
3,659,965	+		ABZR86_RS16205	0.22	-0.2
3,659,966	-		ABZR86_RS16205	0.22	+0.0
3,660,121	+		ABZR86_RS16205	0.39	-1.0
3,660,160	+		ABZR86_RS16205	0.43	-0.3
3,660,161	-		ABZR86_RS16205	0.43	+0.1
3,660,161	-		ABZR86_RS16205	0.43	+1.0
3,660,280	+		ABZR86_RS16205	0.57	-0.0
3,660,454	+		ABZR86_RS16205	0.76	-0.1
3,660,454	+		ABZR86_RS16205	0.76	+0.1
3,660,455	-		ABZR86_RS16205	0.76	+0.7
3,660,455	-		ABZR86_RS16205	0.76	+1.7
3,660,455	-		ABZR86_RS16205	0.76	+0.5
3,660,589	+				+0.7
3,660,589	+				+0.5
3,660,589	+				+0.3
3,660,590	-				+0.4
3,660,590	-				+1.1