Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS13200

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
2,962,180	+		ABZR86_RS13190	0.86	+0.1
2,962,216	+		ABZR86_RS13190	0.88	+0.7
2,962,217	-		ABZR86_RS13190	0.88	+0.4
2,962,343	-				-0.0
2,962,343	-				+0.6
2,962,343	-				+0.3
2,962,390	+				+0.0
2,962,658	+		ABZR86_RS13195	0.84	-0.1
2,962,659	-		ABZR86_RS13195	0.85	-1.0
2,962,749	+				+0.1
2,962,750	-				-0.0
2,962,750	-				+0.7
2,962,750	-				-1.2
2,963,038	+		ABZR86_RS13200	0.20	-0.5
2,963,140	+		ABZR86_RS13200	0.27	-0.1
2,963,141	-		ABZR86_RS13200	0.27	-0.0
2,963,141	-		ABZR86_RS13200	0.27	+0.3
2,963,203	+		ABZR86_RS13200	0.31	-0.7
2,963,203	+		ABZR86_RS13200	0.31	+0.0
2,963,204	-		ABZR86_RS13200	0.31	-0.1
2,963,317	+		ABZR86_RS13200	0.39	-2.7
2,963,317	+		ABZR86_RS13200	0.39	-0.1
2,963,317	+		ABZR86_RS13200	0.39	-0.6
2,963,323	+		ABZR86_RS13200	0.39	-0.0
2,963,335	+		ABZR86_RS13200	0.40	-0.7
2,963,414	-		ABZR86_RS13200	0.45	-0.7
2,963,414	-		ABZR86_RS13200	0.45	-0.1
2,963,449	+		ABZR86_RS13200	0.48	-0.4
2,963,449	+		ABZR86_RS13200	0.48	+0.3
2,963,450	-		ABZR86_RS13200	0.48	+0.3
2,963,450	-		ABZR86_RS13200	0.48	-0.2
2,963,539	+		ABZR86_RS13200	0.54	+0.3
2,963,539	+		ABZR86_RS13200	0.54	-0.3
2,963,539	+		ABZR86_RS13200	0.54	+0.6
2,963,540	-		ABZR86_RS13200	0.54	-0.2
2,963,563	+		ABZR86_RS13200	0.55	+0.6
2,963,563	+		ABZR86_RS13200	0.55	+0.2
2,963,564	-		ABZR86_RS13200	0.55	-1.0
2,963,578	+		ABZR86_RS13200	0.56	-0.5
2,963,579	-		ABZR86_RS13200	0.57	+0.1
2,963,660	+		ABZR86_RS13200	0.62	+0.6
2,963,741	-		ABZR86_RS13200	0.68	-0.6
2,963,773	+		ABZR86_RS13200	0.70	-0.6
2,963,779	+		ABZR86_RS13200	0.70	-0.3
2,963,779	+		ABZR86_RS13200	0.70	+0.0
2,963,780	-		ABZR86_RS13200	0.70	-0.3
2,963,780	-		ABZR86_RS13200	0.70	+0.6
2,963,780	-		ABZR86_RS13200	0.70	-2.3
2,963,797	+		ABZR86_RS13200	0.71	-1.4
2,963,797	+		ABZR86_RS13200	0.71	+0.9
2,963,797	+		ABZR86_RS13200	0.71	+0.2
2,963,797	+		ABZR86_RS13200	0.71	+1.7
2,963,797	+		ABZR86_RS13200	0.71	+0.2
2,963,797	+		ABZR86_RS13200	0.71	+0.4
2,963,798	-		ABZR86_RS13200	0.71	+0.5
2,963,798	-		ABZR86_RS13200	0.71	+0.0
2,963,863	+		ABZR86_RS13200	0.76	+0.4
2,963,863	+		ABZR86_RS13200	0.76	+0.8
2,963,864	-		ABZR86_RS13200	0.76	-0.7
2,963,864	-		ABZR86_RS13200	0.76	+0.3
2,963,864	-		ABZR86_RS13200	0.76	-0.1
2,963,864	-		ABZR86_RS13200	0.76	+0.5
2,963,874	+		ABZR86_RS13200	0.77	-0.0
2,963,875	-		ABZR86_RS13200	0.77	+0.4
2,963,962	+		ABZR86_RS13200	0.83	+1.1
2,963,963	-		ABZR86_RS13200	0.83	-1.3
2,964,014	-		ABZR86_RS13200	0.86	+0.1
2,964,014	-		ABZR86_RS13200	0.86	+0.8
2,964,140	-				+1.6
2,964,140	-				+0.5
2,964,154	+				-0.4
2,964,154	+				+0.4
2,964,154	+				+0.3
2,964,155	-				+0.1
2,964,155	-				+1.4
2,964,155	-				-0.3
2,964,176	-				-0.7
2,964,176	-				-1.3
2,964,212	-				+0.1
2,964,240	+				+0.4
2,964,241	-				-0.8
2,964,241	-				-0.0
2,964,241	-				+1.2
2,964,419	+		ABZR86_RS13205	0.33	-0.7
2,964,419	+		ABZR86_RS13205	0.33	-0.5
2,964,420	-		ABZR86_RS13205	0.33	-0.1
2,964,420	-		ABZR86_RS13205	0.33	-0.6
2,964,420	-		ABZR86_RS13205	0.33	+0.7
2,964,644	+		ABZR86_RS13205	0.72	-0.0
2,964,645	-		ABZR86_RS13205	0.72	+0.9
2,964,943	+				+0.5
2,964,943	+				+0.9
2,964,943	+				+0.9
2,964,955	-				+0.4
2,964,955	-				-1.4
2,964,966	+				+0.3
2,964,966	+				+0.5
2,964,967	-				-1.2
2,964,992	+				-0.2
2,964,993	-				+0.7
2,964,993	-				+0.3
2,964,993	-				+0.3
2,964,997	+				-0.5
2,964,998	-				+0.3
2,964,998	-				+0.2
2,964,998	-				+0.7