Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS13050

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
2,927,990	+		ABZR86_RS13045	0.39	+1.1
2,927,990	+		ABZR86_RS13045	0.39	+0.3
2,927,991	-		ABZR86_RS13045	0.39	+0.5
2,927,991	-		ABZR86_RS13045	0.39	+0.0
2,928,089	+		ABZR86_RS13045	0.48	+1.1
2,928,089	+		ABZR86_RS13045	0.48	-0.2
2,928,089	+		ABZR86_RS13045	0.48	-0.5
2,928,089	+		ABZR86_RS13045	0.48	+0.5
2,928,089	+		ABZR86_RS13045	0.48	+1.8
2,928,089	+		ABZR86_RS13045	0.48	+0.6
2,928,090	-		ABZR86_RS13045	0.48	-0.1
2,928,090	-		ABZR86_RS13045	0.48	-0.4
2,928,090	-		ABZR86_RS13045	0.48	-1.7
2,928,090	-		ABZR86_RS13045	0.48	-0.2
2,928,090	-		ABZR86_RS13045	0.48	-0.9
2,928,395	+		ABZR86_RS13045	0.76	+0.8
2,928,404	+		ABZR86_RS13045	0.77	+0.1
2,928,404	+		ABZR86_RS13045	0.77	+0.5
2,928,404	+		ABZR86_RS13045	0.77	-0.4
2,928,404	+		ABZR86_RS13045	0.77	+0.7
2,928,404	+		ABZR86_RS13045	0.77	-1.1
2,928,405	-		ABZR86_RS13045	0.77	+0.5
2,928,620	+				-0.2
2,928,661	+				-0.9
2,928,661	+				+0.7
2,928,661	+				+0.2
2,928,661	+				+0.3
2,928,662	-				-0.2
2,928,662	-				+0.9
2,928,703	+				-1.3
2,928,704	-				+0.2
2,928,704	-				-0.7
2,928,704	-				+0.2
2,928,757	+				-0.1
2,928,757	+				+0.5
2,928,758	-				+0.7
2,928,822	+				-0.0
2,928,823	-				+0.0
2,928,823	-				+0.8
2,928,826	+				-0.7
2,928,826	+				-0.9
2,928,827	-				+0.9
2,928,872	-				+0.4
2,928,997	+		ABZR86_RS13050	0.14	-0.1
2,928,998	-		ABZR86_RS13050	0.14	+0.6
2,929,117	+		ABZR86_RS13050	0.22	-0.3
2,929,118	-		ABZR86_RS13050	0.22	+0.2
2,929,118	-		ABZR86_RS13050	0.22	+0.7
2,929,252	+		ABZR86_RS13050	0.32	-0.2
2,929,339	+		ABZR86_RS13050	0.39	-0.8
2,929,339	+		ABZR86_RS13050	0.39	+0.2
2,929,340	-		ABZR86_RS13050	0.39	+0.7
2,929,378	+		ABZR86_RS13050	0.42	+0.1
2,929,378	+		ABZR86_RS13050	0.42	+1.6
2,929,379	-		ABZR86_RS13050	0.42	-0.9
2,929,379	-		ABZR86_RS13050	0.42	+0.4
2,929,379	-		ABZR86_RS13050	0.42	+0.2
2,929,379	-		ABZR86_RS13050	0.42	-2.3
2,929,379	-		ABZR86_RS13050	0.42	+0.3
2,929,379	-		ABZR86_RS13050	0.42	-0.2
2,929,492	+		ABZR86_RS13050	0.50	-0.1
2,929,492	+		ABZR86_RS13050	0.50	-1.6
2,929,492	+		ABZR86_RS13050	0.50	-0.5
2,929,492	+		ABZR86_RS13050	0.50	+1.0
2,929,492	+		ABZR86_RS13050	0.50	+1.4
2,929,546	+		ABZR86_RS13050	0.54	+0.3
2,929,546	+		ABZR86_RS13050	0.54	+0.8
2,929,546	+		ABZR86_RS13050	0.54	-0.7
2,929,546	+		ABZR86_RS13050	0.54	+0.7
2,929,546	+		ABZR86_RS13050	0.54	+0.7
2,929,546	+		ABZR86_RS13050	0.54	+1.7
2,929,547	-		ABZR86_RS13050	0.54	+0.9
2,929,547	-		ABZR86_RS13050	0.54	+0.9
2,929,547	-		ABZR86_RS13050	0.54	+0.6
2,929,547	-		ABZR86_RS13050	0.54	-0.2
2,929,547	-		ABZR86_RS13050	0.54	-0.1
2,929,547	-		ABZR86_RS13050	0.54	-0.1
2,929,547	-		ABZR86_RS13050	0.54	+0.3
2,929,547	-		ABZR86_RS13050	0.54	-0.7
2,929,547	-		ABZR86_RS13050	0.54	+0.1
2,929,547	-		ABZR86_RS13050	0.54	+0.5
2,929,547	-		ABZR86_RS13050	0.54	+0.5
2,929,588	+		ABZR86_RS13050	0.57	+0.2
2,929,690	+		ABZR86_RS13050	0.65	-0.6
2,929,690	+		ABZR86_RS13050	0.65	-0.3
2,929,690	+		ABZR86_RS13050	0.65	-1.7
2,929,690	+		ABZR86_RS13050	0.65	-2.4
2,929,690	+		ABZR86_RS13050	0.65	+0.0
2,929,690	+		ABZR86_RS13050	0.65	+1.1
2,929,691	-		ABZR86_RS13050	0.65	+0.5
2,929,691	-		ABZR86_RS13050	0.65	+0.0
2,929,691	-		ABZR86_RS13050	0.65	+0.1
2,929,691	-		ABZR86_RS13050	0.65	+0.2
2,929,691	-		ABZR86_RS13050	0.65	+0.7
2,929,691	-		ABZR86_RS13050	0.65	+0.6
2,929,691	-		ABZR86_RS13050	0.65	-0.5
2,929,691	-		ABZR86_RS13050	0.65	+0.1
2,929,691	-		ABZR86_RS13050	0.65	+0.2
2,929,691	-		ABZR86_RS13050	0.65	+0.3
2,929,691	-		ABZR86_RS13050	0.65	+0.0
2,929,691	-		ABZR86_RS13050	0.65	+0.8
2,929,691	-		ABZR86_RS13050	0.65	+0.4
2,929,693	+		ABZR86_RS13050	0.65	-0.5
2,929,693	+		ABZR86_RS13050	0.65	+0.7
2,929,693	+		ABZR86_RS13050	0.65	+0.5
2,929,693	+		ABZR86_RS13050	0.65	-0.3
2,929,693	+		ABZR86_RS13050	0.65	-1.5
2,929,694	-		ABZR86_RS13050	0.65	-0.0
2,929,694	-		ABZR86_RS13050	0.65	-0.8
2,929,729	+		ABZR86_RS13050	0.68	+0.9
2,929,771	+		ABZR86_RS13050	0.71	+0.0
2,929,771	+		ABZR86_RS13050	0.71	+0.6
2,929,771	+		ABZR86_RS13050	0.71	+0.6
2,929,772	-		ABZR86_RS13050	0.71	+1.1
2,929,772	-		ABZR86_RS13050	0.71	-0.5
2,929,772	-		ABZR86_RS13050	0.71	-1.8
2,929,858	+		ABZR86_RS13050	0.77	+0.3
2,929,858	+		ABZR86_RS13050	0.77	+1.9
2,929,858	+		ABZR86_RS13050	0.77	-2.3
2,929,858	+		ABZR86_RS13050	0.77	+0.4
2,929,858	+		ABZR86_RS13050	0.77	-0.0
2,929,858	+		ABZR86_RS13050	0.77	+2.1
2,929,858	+		ABZR86_RS13050	0.77	+0.0
2,929,859	-		ABZR86_RS13050	0.77	+0.1
2,929,859	-		ABZR86_RS13050	0.77	+0.7
2,929,859	-		ABZR86_RS13050	0.77	+0.3
2,929,859	-		ABZR86_RS13050	0.77	+0.8
2,929,859	-		ABZR86_RS13050	0.77	-0.1
2,929,885	+		ABZR86_RS13050	0.79	+1.8
2,929,885	+		ABZR86_RS13050	0.79	-0.3
2,929,885	+		ABZR86_RS13050	0.79	-0.1
2,929,885	+		ABZR86_RS13050	0.79	-1.5
2,929,885	+		ABZR86_RS13050	0.79	-0.0
2,929,885	+		ABZR86_RS13050	0.79	-0.5
2,929,886	-		ABZR86_RS13050	0.79	+0.4
2,929,886	-		ABZR86_RS13050	0.79	+0.4
2,929,886	-		ABZR86_RS13050	0.79	-0.3
2,930,003	-		ABZR86_RS13050	0.88	+0.0
2,930,003	-		ABZR86_RS13050	0.88	+0.2
2,930,003	-		ABZR86_RS13050	0.88	+0.1
2,930,005	+		ABZR86_RS13050	0.88	-1.0
2,930,005	+		ABZR86_RS13050	0.88	+0.1
2,930,005	+		ABZR86_RS13050	0.88	-0.0
2,930,005	+		ABZR86_RS13050	0.88	-0.1
2,930,005	+		ABZR86_RS13050	0.88	+0.0
2,930,005	+		ABZR86_RS13050	0.88	-0.3
2,930,005	+		ABZR86_RS13050	0.88	-0.7
2,930,006	-		ABZR86_RS13050	0.88	-0.0
2,930,006	-		ABZR86_RS13050	0.88	-0.7
2,930,006	-		ABZR86_RS13050	0.88	-1.6
2,930,068	+				-1.0
2,930,068	+				+0.0
2,930,068	+				-0.1
2,930,068	+				-1.6
2,930,068	+				-0.4
2,930,068	+				-0.4
2,930,068	+				+0.2
2,930,068	+				-0.1
2,930,069	-				+0.4
2,930,069	-				+0.4
2,930,069	-				+0.0
2,930,069	-				+0.8
2,930,122	+				-0.0
2,930,122	+				+0.0
2,930,123	-				+0.6
2,930,123	-				-0.5
2,930,123	-				-0.2
2,930,374	+		ABZR86_RS13055	0.16	-0.4
2,930,375	-		ABZR86_RS13055	0.16	+1.0
2,930,375	-		ABZR86_RS13055	0.16	+0.1
2,930,375	-		ABZR86_RS13055	0.16	+0.3
2,930,375	-		ABZR86_RS13055	0.16	+0.4
2,930,375	-		ABZR86_RS13055	0.16	-3.0
2,930,375	-		ABZR86_RS13055	0.16	+0.1
2,930,845	+		ABZR86_RS13055	0.62	-2.0
2,930,845	+		ABZR86_RS13055	0.62	-0.2
2,930,845	+		ABZR86_RS13055	0.62	+1.0
2,930,846	-		ABZR86_RS13055	0.62	-0.1
2,930,846	-		ABZR86_RS13055	0.62	+1.0
2,930,887	+		ABZR86_RS13055	0.66	-0.2
2,930,887	+		ABZR86_RS13055	0.66	-2.4
2,930,887	+		ABZR86_RS13055	0.66	-0.5
2,930,887	+		ABZR86_RS13055	0.66	+0.9
2,930,887	+		ABZR86_RS13055	0.66	+0.6
2,930,888	-		ABZR86_RS13055	0.66	+0.6
2,930,888	-		ABZR86_RS13055	0.66	-2.0
2,930,888	-		ABZR86_RS13055	0.66	-0.5
2,930,888	-		ABZR86_RS13055	0.66	-0.2
2,930,951	+		ABZR86_RS13055	0.72	+0.5
2,930,952	-		ABZR86_RS13055	0.73	-3.5
2,930,952	-		ABZR86_RS13055	0.73	+1.2
2,930,952	-		ABZR86_RS13055	0.73	-0.3