Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS12140

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
2,712,591	+		ABZR86_RS12135	0.18	+0.2
2,712,591	+		ABZR86_RS12135	0.18	+0.4
2,712,591	+		ABZR86_RS12135	0.18	+0.0
2,712,591	+		ABZR86_RS12135	0.18	+0.0
2,712,591	+		ABZR86_RS12135	0.18	-1.1
2,712,591	+		ABZR86_RS12135	0.18	-1.1
2,712,591	+		ABZR86_RS12135	0.18	-0.0
2,712,592	-		ABZR86_RS12135	0.18	+1.2
2,712,592	-		ABZR86_RS12135	0.18	-0.0
2,712,592	-		ABZR86_RS12135	0.18	+0.4
2,712,592	-		ABZR86_RS12135	0.18	-0.2
2,712,625	-		ABZR86_RS12135	0.21	+1.4
2,712,625	-		ABZR86_RS12135	0.21	-1.2
2,712,625	-		ABZR86_RS12135	0.21	-0.4
2,712,700	+		ABZR86_RS12135	0.27	+1.4
2,712,701	-		ABZR86_RS12135	0.27	-2.3
2,712,701	-		ABZR86_RS12135	0.27	+0.4
2,712,840	+		ABZR86_RS12135	0.39	-0.4
2,712,992	+		ABZR86_RS12135	0.51	-0.3
2,712,993	-		ABZR86_RS12135	0.51	+0.2
2,712,993	-		ABZR86_RS12135	0.51	+0.1
2,713,115	-		ABZR86_RS12135	0.61	+0.1
2,713,115	-		ABZR86_RS12135	0.61	+0.2
2,713,161	+		ABZR86_RS12135	0.65	-0.6
2,713,162	-		ABZR86_RS12135	0.65	-0.0
2,713,225	+		ABZR86_RS12135	0.71	-0.7
2,713,226	-		ABZR86_RS12135	0.71	-0.2
2,713,251	+		ABZR86_RS12135	0.73	-0.1
2,713,251	+		ABZR86_RS12135	0.73	-0.3
2,713,252	-		ABZR86_RS12135	0.73	+0.4
2,713,252	-		ABZR86_RS12135	0.73	+0.7
2,713,252	-		ABZR86_RS12135	0.73	-0.2
2,713,252	-		ABZR86_RS12135	0.73	-0.7
2,713,284	+		ABZR86_RS12135	0.75	+0.4
2,713,284	+		ABZR86_RS12135	0.75	+1.0
2,713,285	-		ABZR86_RS12135	0.76	+0.2
2,713,341	+		ABZR86_RS12135	0.80	-0.6
2,713,679	-				-0.4
2,713,730	-		ABZR86_RS12140	0.11	-0.5
2,714,050	+		ABZR86_RS12140	0.32	-0.6
2,714,050	+		ABZR86_RS12140	0.32	-0.9
2,714,089	+		ABZR86_RS12140	0.34	+0.2
2,714,090	-		ABZR86_RS12140	0.34	-0.9
2,714,105	-		ABZR86_RS12140	0.35	-0.0
2,714,105	-		ABZR86_RS12140	0.35	-0.4
2,714,105	-		ABZR86_RS12140	0.35	+0.5
2,714,149	+		ABZR86_RS12140	0.38	-1.2
2,714,150	-		ABZR86_RS12140	0.38	+1.0
2,714,501	-		ABZR86_RS12140	0.61	-0.4
2,714,507	-		ABZR86_RS12140	0.61	+0.2
2,714,581	+		ABZR86_RS12140	0.66	-0.1
2,714,581	+		ABZR86_RS12140	0.66	-1.2
2,714,581	+		ABZR86_RS12140	0.66	-0.6
2,714,581	+		ABZR86_RS12140	0.66	+0.2
2,714,582	-		ABZR86_RS12140	0.66	-0.7
2,714,582	-		ABZR86_RS12140	0.66	+1.9
2,714,593	+		ABZR86_RS12140	0.67	-0.5
2,714,594	-		ABZR86_RS12140	0.67	+0.3
2,714,725	+		ABZR86_RS12140	0.75	-0.5
2,714,951	-				+0.2
2,715,024	+				+0.8
2,715,024	+				-0.4
2,715,024	+				+1.3
2,715,024	+				+0.1
2,715,024	+				-0.4
2,715,024	+				-1.4
2,715,024	+				+1.1
2,715,025	-				+0.3
2,715,025	-				-0.2
2,715,025	-				+1.0
2,715,025	-				-0.1
2,715,025	-				-0.8
2,715,058	+				+1.0
2,715,059	-				+0.9
2,715,104	-				+0.1
2,715,209	-				-0.1
2,715,248	+		ABZR86_RS12145	0.12	+1.5
2,715,308	+		ABZR86_RS12145	0.22	-1.0
2,715,309	-		ABZR86_RS12145	0.22	-0.2
2,715,427	-		ABZR86_RS12145	0.40	+0.5
2,715,473	+		ABZR86_RS12145	0.48	-0.2
2,715,509	+		ABZR86_RS12145	0.53	+0.7
2,715,510	-		ABZR86_RS12145	0.53	-0.6
2,715,623	+		ABZR86_RS12145	0.71	-0.5
2,715,623	+		ABZR86_RS12145	0.71	+0.2
2,715,729	-		ABZR86_RS12145	0.88	-0.6
2,715,729	-		ABZR86_RS12145	0.88	-2.0
2,715,749	+				-0.1
2,715,782	+				+0.2
2,715,782	+				-0.4
2,715,782	+				+1.0
2,715,782	+				-0.6
2,715,783	-				+0.0
2,715,783	-				+0.2
2,715,783	-				+0.0
2,715,783	-				+0.2
2,715,785	+				-0.5
2,715,785	+				+1.6
2,715,786	-				+0.7
2,715,904	+				-0.4
2,715,904	+				+0.6
2,715,904	+				-0.7
2,715,905	-				-0.3
2,715,980	-				+0.6