Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS11520

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
2,569,705	+		ABZR86_RS11515	0.35	-0.3
2,569,779	+		ABZR86_RS11515	0.41	-1.7
2,569,947	+		ABZR86_RS11515	0.55	+0.3
2,569,955	+		ABZR86_RS11515	0.55	+0.7
2,569,955	+		ABZR86_RS11515	0.55	-0.3
2,569,990	-		ABZR86_RS11515	0.58	-1.0
2,570,157	+		ABZR86_RS11515	0.71	-0.4
2,570,208	+		ABZR86_RS11515	0.75	-1.7
2,570,208	+		ABZR86_RS11515	0.75	+0.9
2,570,208	+		ABZR86_RS11515	0.75	-0.0
2,570,209	-		ABZR86_RS11515	0.75	-2.3
2,570,209	-		ABZR86_RS11515	0.75	-0.7
2,570,209	-		ABZR86_RS11515	0.75	+0.1
2,570,209	-		ABZR86_RS11515	0.75	-0.6
2,570,209	-		ABZR86_RS11515	0.75	-0.7
2,570,614	+				-0.5
2,570,614	+				+0.1
2,570,614	+				+0.9
2,570,614	+				-0.3
2,570,614	+				+1.5
2,570,615	-				+0.2
2,570,615	-				+0.2
2,570,615	-				-1.2
2,570,615	-				-2.0
2,570,615	-				+0.3
2,570,615	-				+0.4
2,570,983	+		ABZR86_RS11520	0.13	+0.1
2,570,984	-		ABZR86_RS11520	0.13	-0.1
2,570,984	-		ABZR86_RS11520	0.13	+0.4
2,570,984	-		ABZR86_RS11520	0.13	+0.3
2,570,984	-		ABZR86_RS11520	0.13	+0.0
2,570,984	-		ABZR86_RS11520	0.13	+0.5
2,571,136	+		ABZR86_RS11520	0.20	+0.5
2,571,136	+		ABZR86_RS11520	0.20	-0.2
2,571,137	-		ABZR86_RS11520	0.20	-1.0
2,571,137	-		ABZR86_RS11520	0.20	+0.0
2,571,336	+		ABZR86_RS11520	0.29	-0.5
2,571,336	+		ABZR86_RS11520	0.29	+0.6
2,571,457	-		ABZR86_RS11520	0.35	+0.0
2,571,505	-		ABZR86_RS11520	0.37	-0.1
2,571,580	-		ABZR86_RS11520	0.40	-0.9
2,571,580	-		ABZR86_RS11520	0.40	-1.7
2,571,621	+		ABZR86_RS11520	0.42	-1.1
2,571,621	+		ABZR86_RS11520	0.42	-0.7
2,571,621	+		ABZR86_RS11520	0.42	+0.4
2,571,622	-		ABZR86_RS11520	0.42	+0.1
2,571,622	-		ABZR86_RS11520	0.42	+0.7
2,571,622	-		ABZR86_RS11520	0.42	+0.8
2,571,625	-		ABZR86_RS11520	0.42	-0.8
2,571,625	-		ABZR86_RS11520	0.42	+0.9
2,571,687	+		ABZR86_RS11520	0.45	-0.2
2,571,687	+		ABZR86_RS11520	0.45	-3.7
2,571,687	+		ABZR86_RS11520	0.45	+0.7
2,571,688	-		ABZR86_RS11520	0.45	+0.3
2,571,720	+		ABZR86_RS11520	0.46	-0.7
2,571,720	+		ABZR86_RS11520	0.46	+0.8
2,571,721	-		ABZR86_RS11520	0.46	-0.5
2,571,721	-		ABZR86_RS11520	0.46	-0.5
2,571,804	+		ABZR86_RS11520	0.50	-0.7
2,571,849	+		ABZR86_RS11520	0.52	-0.6
2,571,849	+		ABZR86_RS11520	0.52	-0.3
2,571,850	-		ABZR86_RS11520	0.52	-0.6
2,571,850	-		ABZR86_RS11520	0.52	+0.9
2,571,850	-		ABZR86_RS11520	0.52	+0.5
2,571,865	-		ABZR86_RS11520	0.53	-0.5
2,571,865	-		ABZR86_RS11520	0.53	+0.3
2,571,865	-		ABZR86_RS11520	0.53	+0.9
2,571,867	+		ABZR86_RS11520	0.53	-0.1
2,571,868	-		ABZR86_RS11520	0.53	-0.3
2,571,868	-		ABZR86_RS11520	0.53	-0.1
2,571,892	-		ABZR86_RS11520	0.54	-0.7
2,571,903	+		ABZR86_RS11520	0.55	+0.7
2,571,952	-		ABZR86_RS11520	0.57	-0.1
2,572,086	+		ABZR86_RS11520	0.63	-2.1
2,572,087	-		ABZR86_RS11520	0.63	+0.0
2,572,119	+		ABZR86_RS11520	0.64	+1.4
2,572,120	-		ABZR86_RS11520	0.64	-2.2
2,572,120	-		ABZR86_RS11520	0.64	+0.5
2,572,120	-		ABZR86_RS11520	0.64	+1.4
2,572,120	-		ABZR86_RS11520	0.64	+1.0
2,572,120	-		ABZR86_RS11520	0.64	-0.3
2,572,120	-		ABZR86_RS11520	0.64	+0.3
2,572,120	-		ABZR86_RS11520	0.64	-0.7
2,572,146	+		ABZR86_RS11520	0.66	+0.5
2,572,183	-		ABZR86_RS11520	0.67	-0.1
2,572,183	-		ABZR86_RS11520	0.67	+0.9
2,572,250	+		ABZR86_RS11520	0.70	+0.4
2,572,254	+		ABZR86_RS11520	0.71	+0.7
2,572,254	+		ABZR86_RS11520	0.71	-0.5
2,572,255	-		ABZR86_RS11520	0.71	+0.9
2,572,255	-		ABZR86_RS11520	0.71	-0.1
2,572,491	+		ABZR86_RS11520	0.81	-1.0
2,572,492	-		ABZR86_RS11520	0.81	+0.9
2,572,506	+		ABZR86_RS11520	0.82	-0.3
2,572,507	-		ABZR86_RS11520	0.82	-0.5
2,572,507	-		ABZR86_RS11520	0.82	-1.4
2,572,545	+		ABZR86_RS11520	0.84	-0.0
2,572,677	+		ABZR86_RS11520	0.90	+0.5
2,572,677	+		ABZR86_RS11520	0.90	-0.9
2,572,677	+		ABZR86_RS11520	0.90	+1.3
2,572,678	-		ABZR86_RS11520	0.90	+0.6
2,572,678	-		ABZR86_RS11520	0.90	-0.0
2,572,752	+				+0.9
2,572,752	+				+0.9
2,572,822	-				-0.0
2,572,822	-				-1.2
2,572,857	+				-0.2
2,572,857	+				-0.1
2,572,857	+				-0.2
2,572,857	+				-0.8
2,572,858	-				-2.1
2,572,858	-				+0.8
2,572,858	-				-0.2
2,572,858	-				+1.0
2,572,861	+				+0.5
2,572,955	+				+0.1
2,573,192	+		ABZR86_RS11525	0.26	+0.2
2,573,192	+		ABZR86_RS11525	0.26	-0.0
2,573,193	-		ABZR86_RS11525	0.26	+0.3
2,573,468	+		ABZR86_RS11525	0.53	-0.2
2,573,468	+		ABZR86_RS11525	0.53	+0.7
2,573,468	+		ABZR86_RS11525	0.53	+0.2
2,573,468	+		ABZR86_RS11525	0.53	-0.2
2,573,468	+		ABZR86_RS11525	0.53	-1.6
2,573,469	-		ABZR86_RS11525	0.54	+0.3
2,573,469	-		ABZR86_RS11525	0.54	+0.5
2,573,469	-		ABZR86_RS11525	0.54	+0.3
2,573,486	+		ABZR86_RS11525	0.55	-0.2
2,573,486	+		ABZR86_RS11525	0.55	+0.2
2,573,738	+		ABZR86_RS11525	0.81	+1.5
2,573,738	+		ABZR86_RS11525	0.81	+0.5
2,573,738	+		ABZR86_RS11525	0.81	-0.4
2,573,738	+		ABZR86_RS11525	0.81	-1.0
2,573,739	-		ABZR86_RS11525	0.81	+1.2
2,573,739	-		ABZR86_RS11525	0.81	-0.4
2,573,739	-		ABZR86_RS11525	0.81	+0.5
2,573,747	+		ABZR86_RS11525	0.82	+0.2
2,573,748	-		ABZR86_RS11525	0.82	-0.1
2,573,748	-		ABZR86_RS11525	0.82	+0.8
2,573,885	+				+0.9