Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS10690

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
2,373,996	+				-0.7
2,373,996	+				-0.7
2,373,996	+				+0.9
2,373,996	+				+0.5
2,373,996	+				-1.0
2,374,149	+		ABZR86_RS10685	0.17	-0.8
2,374,149	+		ABZR86_RS10685	0.17	+0.1
2,374,149	+		ABZR86_RS10685	0.17	+0.0
2,374,149	+		ABZR86_RS10685	0.17	-2.7
2,374,150	-		ABZR86_RS10685	0.17	-0.1
2,374,150	-		ABZR86_RS10685	0.17	-0.4
2,374,150	-		ABZR86_RS10685	0.17	-0.5
2,374,150	-		ABZR86_RS10685	0.17	+1.4
2,374,150	-		ABZR86_RS10685	0.17	-1.4
2,374,363	-		ABZR86_RS10685	0.41	+1.1
2,374,384	-		ABZR86_RS10685	0.43	+0.7
2,374,384	-		ABZR86_RS10685	0.43	+0.2
2,374,384	-		ABZR86_RS10685	0.43	+0.4
2,374,384	-		ABZR86_RS10685	0.43	+0.0
2,374,482	+		ABZR86_RS10685	0.54	+0.0
2,374,482	+		ABZR86_RS10685	0.54	-0.4
2,374,482	+		ABZR86_RS10685	0.54	-0.9
2,374,482	+		ABZR86_RS10685	0.54	+1.4
2,374,483	-		ABZR86_RS10685	0.54	+0.3
2,374,483	-		ABZR86_RS10685	0.54	-0.4
2,374,483	-		ABZR86_RS10685	0.54	-0.0
2,374,495	-		ABZR86_RS10685	0.55	+1.0
2,374,495	-		ABZR86_RS10685	0.55	+0.9
2,374,497	-		ABZR86_RS10685	0.56	-1.2
2,374,569	+		ABZR86_RS10685	0.64	-1.0
2,374,932	-				-1.2
2,374,997	+				+0.2
2,374,997	+				+0.4
2,374,998	-				-0.4
2,374,998	-				+0.5
2,374,998	-				+0.3
2,374,998	-				+0.3
2,374,998	-				-0.8
2,374,998	-				-0.8
2,375,138	+		ABZR86_RS10690	0.15	-0.5
2,375,138	+		ABZR86_RS10690	0.15	-0.4
2,375,249	+		ABZR86_RS10690	0.26	+0.0
2,375,250	-		ABZR86_RS10690	0.26	-0.4
2,375,250	-		ABZR86_RS10690	0.26	+0.0
2,375,250	-		ABZR86_RS10690	0.26	-0.4
2,375,250	-		ABZR86_RS10690	0.26	-0.2
2,375,345	+		ABZR86_RS10690	0.35	-0.5
2,375,345	+		ABZR86_RS10690	0.35	-0.8
2,375,354	+		ABZR86_RS10690	0.36	-0.5
2,375,380	+		ABZR86_RS10690	0.39	-0.8
2,375,381	-		ABZR86_RS10690	0.39	-0.4
2,375,608	+		ABZR86_RS10690	0.61	+1.2
2,375,608	+		ABZR86_RS10690	0.61	-0.5
2,375,608	+		ABZR86_RS10690	0.61	+0.9
2,375,609	-		ABZR86_RS10690	0.61	+0.4
2,375,613	-		ABZR86_RS10690	0.62	-0.6
2,375,613	-		ABZR86_RS10690	0.62	-0.9
2,375,815	-		ABZR86_RS10690	0.82	-0.4
2,375,913	-				+1.0
2,375,996	+				+1.8
2,375,996	+				-0.6
2,375,996	+				-0.2
2,375,997	-				+1.0
2,375,997	-				-0.1
2,375,997	-				+0.5
2,376,206	+				+0.3
2,376,307	+				+0.7
2,376,307	+				+1.1
2,376,307	+				+0.2
2,376,308	-				-0.5
2,376,397	+		ABZR86_RS10695	0.15	+0.3
2,376,398	-		ABZR86_RS10695	0.15	+0.5
2,376,528	+		ABZR86_RS10695	0.28	-0.0
2,376,596	-		ABZR86_RS10695	0.35	+0.8
2,376,765	+		ABZR86_RS10695	0.51	+0.9
2,376,766	-		ABZR86_RS10695	0.51	-0.2
2,376,786	+		ABZR86_RS10695	0.53	-0.6
2,376,787	-		ABZR86_RS10695	0.53	-0.6
2,376,879	+		ABZR86_RS10695	0.62	-0.7
2,376,972	+		ABZR86_RS10695	0.71	-0.0
2,376,973	-		ABZR86_RS10695	0.71	+0.4
2,376,974	+		ABZR86_RS10695	0.72	+0.6