Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS06480

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
1,435,942	+		ABZR86_RS06470	0.54	+0.9
1,435,942	+		ABZR86_RS06470	0.54	-0.3
1,435,950	+		ABZR86_RS06470	0.55	+0.1
1,435,951	-		ABZR86_RS06470	0.56	+0.6
1,436,052	+		ABZR86_RS06470	0.73	-0.4
1,436,052	+		ABZR86_RS06470	0.73	-1.5
1,436,053	-		ABZR86_RS06470	0.73	+0.3
1,436,106	+		ABZR86_RS06470	0.82	+0.3
1,436,106	+		ABZR86_RS06470	0.82	-0.5
1,436,106	+		ABZR86_RS06470	0.82	-0.3
1,436,106	+		ABZR86_RS06470	0.82	-0.3
1,436,106	+		ABZR86_RS06470	0.82	-0.7
1,436,106	+		ABZR86_RS06470	0.82	-0.0
1,436,107	-		ABZR86_RS06470	0.82	+0.2
1,436,107	-		ABZR86_RS06470	0.82	-0.1
1,436,107	-		ABZR86_RS06470	0.82	-1.5
1,436,107	-		ABZR86_RS06470	0.82	-0.1
1,436,166	+				+0.1
1,436,166	+				+0.6
1,436,167	-				-0.0
1,436,167	-				+0.8
1,436,327	+				+0.6
1,436,345	+				-0.2
1,436,345	+				-0.4
1,436,345	+				-0.4
1,436,346	-				+0.5
1,436,379	+				-3.2
1,436,380	-				+0.2
1,436,380	-				+0.5
1,436,394	-				+0.5
1,436,394	-				+0.0
1,436,394	-				-2.0
1,436,399	+				-0.1
1,436,399	+				+0.0
1,436,400	-				-0.1
1,436,410	+				-0.6
1,436,553	+				-0.2
1,436,554	-				+0.9
1,436,554	-				-0.9
1,436,641	+				+0.4
1,436,641	+				+0.2
1,436,641	+				+0.8
1,436,641	+				+0.0
1,436,641	+				+0.5
1,436,641	+				-0.1
1,436,642	-				-0.1
1,436,642	-				-1.5
1,436,642	-				-0.3
1,436,659	+				+0.2
1,436,659	+				-0.4
1,436,660	-				-1.0
1,436,726	+				-1.6
1,436,727	-				-0.4
1,436,814	+				+0.6
1,436,814	+				+0.4
1,436,822	+				-0.1
1,436,826	+				-0.5
1,436,826	+				-0.0
1,436,826	+				+0.0
1,436,826	+				-1.4
1,436,827	-				-1.4
1,436,836	+				+0.4
1,436,880	+				-0.7
1,436,880	+				+0.9
1,436,880	+				-0.3
1,436,880	+				-0.5
1,436,881	-				-0.3
1,436,883	+				+0.7
1,436,884	-				-0.5
1,436,894	+				+1.0
1,436,894	+				-0.9
1,436,895	-				-1.2
1,436,898	+				-3.2
1,436,923	+				+0.2
1,436,923	+				+0.5
1,436,924	-				-0.1
1,436,924	-				+0.1
1,436,924	-				+1.1
1,436,936	-				-0.6
1,436,936	-				+0.2
1,436,944	+				-0.7
1,437,011	+				-1.1
1,437,011	+				+0.6
1,437,011	+				+0.2
1,437,012	-				+0.5
1,437,124	+		ABZR86_RS06480	0.12	-0.5
1,437,124	+		ABZR86_RS06480	0.12	-0.1
1,437,124	+		ABZR86_RS06480	0.12	+0.5
1,437,125	-		ABZR86_RS06480	0.12	-1.0
1,437,125	-		ABZR86_RS06480	0.12	+0.2
1,437,125	-		ABZR86_RS06480	0.12	+0.6
1,437,125	-		ABZR86_RS06480	0.12	-0.4
1,437,128	+		ABZR86_RS06480	0.12	-0.0
1,437,234	+		ABZR86_RS06480	0.19	-0.0
1,437,235	-		ABZR86_RS06480	0.19	+0.2
1,437,283	+		ABZR86_RS06480	0.21	-0.3
1,437,283	+		ABZR86_RS06480	0.21	-0.0
1,437,284	-		ABZR86_RS06480	0.21	+0.1
1,437,305	+		ABZR86_RS06480	0.23	-0.1
1,437,305	+		ABZR86_RS06480	0.23	+0.3
1,437,305	+		ABZR86_RS06480	0.23	+0.5
1,437,372	+		ABZR86_RS06480	0.27	-0.1
1,437,373	-		ABZR86_RS06480	0.27	-0.4
1,437,373	-		ABZR86_RS06480	0.27	-0.0
1,437,406	-		ABZR86_RS06480	0.29	+0.8
1,437,419	-		ABZR86_RS06480	0.29	+0.9
1,437,419	-		ABZR86_RS06480	0.29	-1.0
1,437,482	+		ABZR86_RS06480	0.33	+0.2
1,437,483	-		ABZR86_RS06480	0.33	-0.0
1,437,483	-		ABZR86_RS06480	0.33	-0.8
1,437,495	+		ABZR86_RS06480	0.34	+0.9
1,437,495	+		ABZR86_RS06480	0.34	+0.9
1,437,539	+		ABZR86_RS06480	0.36	-0.4
1,437,539	+		ABZR86_RS06480	0.36	-0.0
1,437,540	-		ABZR86_RS06480	0.37	+0.2
1,437,611	-		ABZR86_RS06480	0.41	+0.4
1,437,634	+		ABZR86_RS06480	0.42	+2.1
1,437,634	+		ABZR86_RS06480	0.42	-0.3
1,437,635	-		ABZR86_RS06480	0.42	+0.5
1,437,670	+		ABZR86_RS06480	0.44	-0.1
1,437,671	-		ABZR86_RS06480	0.44	-0.2
1,437,671	-		ABZR86_RS06480	0.44	-0.2
1,437,753	+		ABZR86_RS06480	0.49	+0.3
1,437,854	+		ABZR86_RS06480	0.55	+1.1
1,437,855	-		ABZR86_RS06480	0.55	+0.3
1,437,870	-		ABZR86_RS06480	0.56	-0.3
1,437,917	+		ABZR86_RS06480	0.59	-0.4
1,437,933	+		ABZR86_RS06480	0.60	+0.1
1,438,042	+		ABZR86_RS06480	0.66	-0.1
1,438,043	-		ABZR86_RS06480	0.66	+1.0
1,438,043	-		ABZR86_RS06480	0.66	-0.3
1,438,043	-		ABZR86_RS06480	0.66	+0.8
1,438,098	+		ABZR86_RS06480	0.69	+0.3
1,438,098	+		ABZR86_RS06480	0.69	+0.4
1,438,098	+		ABZR86_RS06480	0.69	-3.9
1,438,099	-		ABZR86_RS06480	0.69	-0.5
1,438,099	-		ABZR86_RS06480	0.69	-0.2
1,438,099	-		ABZR86_RS06480	0.69	-0.3
1,438,099	-		ABZR86_RS06480	0.69	-1.0
1,438,099	-		ABZR86_RS06480	0.69	-0.1
1,438,175	+		ABZR86_RS06480	0.74	+0.8
1,438,175	+		ABZR86_RS06480	0.74	+0.4
1,438,176	-		ABZR86_RS06480	0.74	+1.0
1,438,176	-		ABZR86_RS06480	0.74	+0.7
1,438,176	-		ABZR86_RS06480	0.74	+0.2
1,438,198	+		ABZR86_RS06480	0.75	-0.3
1,438,198	+		ABZR86_RS06480	0.75	-1.4
1,438,198	+		ABZR86_RS06480	0.75	+0.2
1,438,199	-		ABZR86_RS06480	0.75	+0.2
1,438,199	-		ABZR86_RS06480	0.75	-0.8
1,438,199	-		ABZR86_RS06480	0.75	+0.5
1,438,207	+		ABZR86_RS06480	0.76	+0.8
1,438,207	+		ABZR86_RS06480	0.76	-0.0
1,438,208	-		ABZR86_RS06480	0.76	+0.2
1,438,208	-		ABZR86_RS06480	0.76	+0.2
1,438,378	+		ABZR86_RS06480	0.86	+0.3
1,438,400	-		ABZR86_RS06480	0.87	-0.0
1,438,538	+				+0.4
1,438,538	+				+0.1
1,438,538	+				-0.8
1,438,538	+				-0.1
1,438,539	-				-1.4
1,438,539	-				-2.1
1,438,539	-				-0.0
1,438,539	-				-1.0
1,438,539	-				-0.7
1,438,587	+				-0.2
1,438,617	+				+0.7
1,438,637	+				-0.3
1,438,638	-				-0.1
1,438,638	-				-0.1
1,438,638	-				-0.6
1,438,644	+				+1.3
1,438,645	-				-0.2
1,438,645	-				+0.1
1,438,673	+				+0.4
1,438,694	+		ABZR86_RS06485	0.13	-0.0
1,438,694	+		ABZR86_RS06485	0.13	+0.2
1,438,695	-		ABZR86_RS06485	0.13	+1.1
1,438,703	+		ABZR86_RS06485	0.14	+0.1
1,438,704	-		ABZR86_RS06485	0.15	+1.3
1,438,720	+		ABZR86_RS06485	0.17	+0.2
1,438,721	-		ABZR86_RS06485	0.18	+0.3
1,438,773	+		ABZR86_RS06485	0.26	+0.5
1,438,783	-		ABZR86_RS06485	0.28	+0.8
1,438,821	+		ABZR86_RS06485	0.35	+0.2
1,438,931	+		ABZR86_RS06485	0.53	+0.3
1,438,932	-		ABZR86_RS06485	0.53	-1.1
1,438,932	-		ABZR86_RS06485	0.53	-0.5
1,438,962	+		ABZR86_RS06485	0.59	-0.3
1,438,962	+		ABZR86_RS06485	0.59	+0.3
1,438,962	+		ABZR86_RS06485	0.59	+1.2
1,438,963	-		ABZR86_RS06485	0.59	-0.7
1,438,963	-		ABZR86_RS06485	0.59	-0.3
1,438,963	-		ABZR86_RS06485	0.59	+0.1
1,438,997	+		ABZR86_RS06485	0.64	-0.7
1,438,997	+		ABZR86_RS06485	0.64	+0.6
1,438,998	-		ABZR86_RS06485	0.65	-0.2
1,439,071	+		ABZR86_RS06485	0.77	+1.8
1,439,071	+		ABZR86_RS06485	0.77	+0.5
1,439,144	+		ABZR86_RS06485	0.89	+0.4
1,439,162	+				+0.1
1,439,162	+				-0.6
1,439,163	-				-0.5
1,439,394	+				+0.4
1,439,395	-				+0.8
1,439,395	-				-0.4
1,439,395	-				-0.8
1,439,404	-				-0.7
1,439,408	+				-0.4
1,439,408	+				+0.0
1,439,408	+				+0.7
1,439,409	-				+1.1
1,439,409	-				+0.5
1,439,409	-				+0.2
1,439,459	+		ABZR86_RS06490	0.10	+0.7
1,439,528	-		ABZR86_RS06490	0.13	-2.6
1,439,568	+		ABZR86_RS06490	0.15	+0.7
1,439,568	+		ABZR86_RS06490	0.15	-0.2
1,439,568	+		ABZR86_RS06490	0.15	+1.3
1,439,569	-		ABZR86_RS06490	0.15	-0.2
1,439,569	-		ABZR86_RS06490	0.15	-0.3
1,439,607	+		ABZR86_RS06490	0.17	+0.4
1,439,608	-		ABZR86_RS06490	0.17	+0.1