Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS04485

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
1,004,907	+		ABZR86_RS04480	0.60	-0.5
1,004,907	+		ABZR86_RS04480	0.60	-1.1
1,004,907	+		ABZR86_RS04480	0.60	+0.9
1,004,908	-		ABZR86_RS04480	0.60	-0.6
1,004,908	-		ABZR86_RS04480	0.60	+0.0
1,005,377	+		ABZR86_RS04480	0.85	+0.3
1,005,377	+		ABZR86_RS04480	0.85	+0.0
1,005,377	+		ABZR86_RS04480	0.85	+1.0
1,005,547	-				+0.1
1,005,551	+				+0.4
1,005,552	-				+0.7
1,005,552	-				+0.3
1,005,552	-				-0.4
1,005,552	-				-0.2
1,005,588	-				+0.3
1,005,638	+				+1.6
1,005,638	+				-0.9
1,005,638	+				-0.2
1,005,638	+				-1.0
1,005,638	+				-1.7
1,005,638	+				+0.1
1,005,639	-				+1.4
1,005,665	+				+0.8
1,005,665	+				-0.4
1,005,665	+				+0.7
1,005,665	+				+1.5
1,005,666	-				+0.0
1,005,666	-				+0.1
1,005,793	+				+0.3
1,005,895	+				-0.4
1,005,895	+				+0.0
1,005,929	+				+0.2
1,006,037	+		ABZR86_RS04485	0.14	+0.1
1,006,038	-		ABZR86_RS04485	0.14	+0.9
1,006,090	+		ABZR86_RS04485	0.17	+0.0
1,006,090	+		ABZR86_RS04485	0.17	+0.2
1,006,090	+		ABZR86_RS04485	0.17	-0.6
1,006,090	+		ABZR86_RS04485	0.17	+0.3
1,006,090	+		ABZR86_RS04485	0.17	-1.8
1,006,091	-		ABZR86_RS04485	0.17	-0.5
1,006,091	-		ABZR86_RS04485	0.17	+0.5
1,006,091	-		ABZR86_RS04485	0.17	+0.1
1,006,091	-		ABZR86_RS04485	0.17	+0.0
1,006,091	-		ABZR86_RS04485	0.17	-0.3
1,006,091	-		ABZR86_RS04485	0.17	+0.0
1,006,091	-		ABZR86_RS04485	0.17	+0.8
1,006,091	-		ABZR86_RS04485	0.17	+1.3
1,006,091	-		ABZR86_RS04485	0.17	+0.6
1,006,205	+		ABZR86_RS04485	0.23	+0.1
1,006,206	-		ABZR86_RS04485	0.23	+0.9
1,006,206	-		ABZR86_RS04485	0.23	-0.2
1,006,206	-		ABZR86_RS04485	0.23	+1.2
1,006,250	+		ABZR86_RS04485	0.25	+0.4
1,006,251	-		ABZR86_RS04485	0.25	+0.1
1,006,349	-		ABZR86_RS04485	0.30	+0.6
1,006,349	-		ABZR86_RS04485	0.30	+1.2
1,006,403	+		ABZR86_RS04485	0.32	+0.1
1,006,403	+		ABZR86_RS04485	0.32	+0.3
1,006,404	-		ABZR86_RS04485	0.32	-0.2
1,006,414	+		ABZR86_RS04485	0.33	+0.5
1,006,415	-		ABZR86_RS04485	0.33	-0.5
1,006,415	-		ABZR86_RS04485	0.33	-1.4
1,006,606	+		ABZR86_RS04485	0.42	-0.1
1,006,606	+		ABZR86_RS04485	0.42	+0.1
1,006,606	+		ABZR86_RS04485	0.42	+0.1
1,006,607	-		ABZR86_RS04485	0.43	-1.0
1,006,607	-		ABZR86_RS04485	0.43	-3.1
1,006,607	-		ABZR86_RS04485	0.43	+0.6
1,006,607	-		ABZR86_RS04485	0.43	-0.4
1,006,822	+		ABZR86_RS04485	0.53	-0.3
1,006,822	+		ABZR86_RS04485	0.53	+0.4
1,006,823	-		ABZR86_RS04485	0.53	-0.0
1,006,823	-		ABZR86_RS04485	0.53	-0.2
1,006,823	-		ABZR86_RS04485	0.53	-0.0
1,006,826	+		ABZR86_RS04485	0.53	+0.3
1,006,826	+		ABZR86_RS04485	0.53	+0.9
1,006,826	+		ABZR86_RS04485	0.53	+1.2
1,006,827	-		ABZR86_RS04485	0.53	+0.4
1,006,827	-		ABZR86_RS04485	0.53	+0.4
1,006,827	-		ABZR86_RS04485	0.53	+0.9
1,006,827	-		ABZR86_RS04485	0.53	-0.1
1,007,051	-		ABZR86_RS04485	0.64	+0.3
1,007,110	+		ABZR86_RS04485	0.67	+1.0
1,007,110	+		ABZR86_RS04485	0.67	-1.1
1,007,110	+		ABZR86_RS04485	0.67	+0.9
1,007,111	+		ABZR86_RS04485	0.67	+1.0
1,007,111	-		ABZR86_RS04485	0.67	-0.7
1,007,111	-		ABZR86_RS04485	0.67	-0.1
1,007,111	-		ABZR86_RS04485	0.67	-0.1
1,007,112	+		ABZR86_RS04485	0.68	-0.6
1,007,113	-		ABZR86_RS04485	0.68	+0.6
1,007,151	-		ABZR86_RS04485	0.69	+0.8
1,007,151	-		ABZR86_RS04485	0.69	-0.7
1,007,151	-		ABZR86_RS04485	0.69	+0.4
1,007,254	+		ABZR86_RS04485	0.75	+0.5
1,007,432	-		ABZR86_RS04485	0.83	-0.4
1,007,830	+				+0.2
1,007,906	+				+0.1
1,007,906	+				-0.9
1,007,906	+				+0.2
1,007,906	+				-2.3
1,007,906	+				+1.0
1,007,906	+				+0.5
1,007,906	+				-0.2
1,007,907	-				-1.0
1,007,907	-				-0.3
1,007,907	-				-0.3
1,007,907	-				+0.2
1,007,907	-				+0.5
1,007,933	+				-0.9
1,007,933	+				+0.0
1,007,934	-				+0.1
1,007,934	-				-0.0
1,007,934	-				+2.5
1,007,992	+				-0.4
1,007,992	+				+0.4
1,007,992	+				+0.0
1,007,992	+				-1.5
1,007,992	+				-0.2
1,007,992	+				-0.5
1,007,993	-				-0.4
1,008,088	+		ABZR86_RS04490	0.22	+0.3
1,008,089	-		ABZR86_RS04490	0.22	-0.4
1,008,166	+		ABZR86_RS04490	0.36	-1.2
1,008,166	+		ABZR86_RS04490	0.36	-0.3
1,008,166	+		ABZR86_RS04490	0.36	-1.7
1,008,166	+		ABZR86_RS04490	0.36	-0.6
1,008,424	+		ABZR86_RS04490	0.84	-0.1
1,008,424	+		ABZR86_RS04490	0.84	-0.3
1,008,424	+		ABZR86_RS04490	0.84	-0.3
1,008,425	-		ABZR86_RS04490	0.84	-0.0
1,008,425	-		ABZR86_RS04490	0.84	-1.5
1,008,445	+		ABZR86_RS04490	0.88	-0.0
1,008,445	+		ABZR86_RS04490	0.88	-0.5
1,008,445	+		ABZR86_RS04490	0.88	-0.2
1,008,445	+		ABZR86_RS04490	0.88	-2.8
1,008,446	-		ABZR86_RS04490	0.88	-0.4
1,008,446	-		ABZR86_RS04490	0.88	+0.3
1,008,446	-		ABZR86_RS04490	0.88	-0.0
1,008,446	-		ABZR86_RS04490	0.88	+0.2
1,008,446	-		ABZR86_RS04490	0.88	+1.5
1,008,446	-		ABZR86_RS04490	0.88	+1.3
1,008,446	-		ABZR86_RS04490	0.88	+1.0
1,008,513	+				+0.4
1,008,513	+				+0.2
1,008,513	+				+0.4
1,008,513	+				+0.5
1,008,513	+				-0.0
1,008,514	-				-0.2
1,008,514	-				-0.9
1,008,514	-				-0.7
1,008,607	-				-0.4
1,008,706	-		ABZR86_RS04495	0.30	+0.2