Experiment: Chloramphenicol 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01515 and ABZR86_RS01520 are separated by 736 nucleotides ABZR86_RS01520 and ABZR86_RS01525 are separated by 166 nucleotides
ABZR86_RS01515: ABZR86_RS01515 - hypothetical protein, at 329,404 to 330,375
_RS01515
ABZR86_RS01520: ABZR86_RS01520 - alpha-L-arabinofuranosidase C-terminal domain-containing protein, at 331,112 to 332,626
_RS01520
ABZR86_RS01525: ABZR86_RS01525 - ATP-binding protein, at 332,793 to 334,202
_RS01525
Position (kb) 331
332
333 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 330.128 kb on + strand, within ABZR86_RS01515 at 330.129 kb on - strand, within ABZR86_RS01515 at 330.205 kb on - strand, within ABZR86_RS01515 at 330.205 kb on - strand, within ABZR86_RS01515 at 330.317 kb on + strand at 330.449 kb on + strand at 330.449 kb on + strand at 330.449 kb on + strand at 330.450 kb on - strand at 330.450 kb on - strand at 330.450 kb on - strand at 330.450 kb on - strand at 330.450 kb on - strand at 330.522 kb on + strand at 330.522 kb on + strand at 330.522 kb on + strand at 330.523 kb on - strand at 330.679 kb on + strand at 330.679 kb on + strand at 330.679 kb on + strand at 330.726 kb on - strand at 330.798 kb on + strand at 330.798 kb on + strand at 330.798 kb on + strand at 330.799 kb on - strand at 330.823 kb on - strand at 330.823 kb on - strand at 330.823 kb on - strand at 330.836 kb on + strand at 330.885 kb on - strand at 330.916 kb on + strand at 330.916 kb on + strand at 330.916 kb on + strand at 330.917 kb on - strand at 330.917 kb on - strand at 330.917 kb on - strand at 330.917 kb on - strand at 330.945 kb on - strand at 330.971 kb on + strand at 330.971 kb on + strand at 330.972 kb on - strand at 331.165 kb on - strand at 331.367 kb on + strand, within ABZR86_RS01520 at 331.368 kb on - strand, within ABZR86_RS01520 at 331.368 kb on - strand, within ABZR86_RS01520 at 331.433 kb on + strand, within ABZR86_RS01520 at 331.433 kb on + strand, within ABZR86_RS01520 at 331.433 kb on + strand, within ABZR86_RS01520 at 331.433 kb on + strand, within ABZR86_RS01520 at 331.434 kb on - strand, within ABZR86_RS01520 at 331.434 kb on - strand, within ABZR86_RS01520 at 331.514 kb on + strand, within ABZR86_RS01520 at 331.515 kb on - strand, within ABZR86_RS01520 at 331.690 kb on + strand, within ABZR86_RS01520 at 331.703 kb on + strand, within ABZR86_RS01520 at 331.704 kb on - strand, within ABZR86_RS01520 at 331.704 kb on - strand, within ABZR86_RS01520 at 331.706 kb on + strand, within ABZR86_RS01520 at 331.707 kb on - strand, within ABZR86_RS01520 at 331.728 kb on - strand, within ABZR86_RS01520 at 331.862 kb on + strand, within ABZR86_RS01520 at 331.865 kb on + strand, within ABZR86_RS01520 at 331.865 kb on + strand, within ABZR86_RS01520 at 331.866 kb on - strand, within ABZR86_RS01520 at 331.866 kb on - strand, within ABZR86_RS01520 at 331.866 kb on - strand, within ABZR86_RS01520 at 331.866 kb on - strand, within ABZR86_RS01520 at 332.000 kb on + strand, within ABZR86_RS01520 at 332.000 kb on + strand, within ABZR86_RS01520 at 332.243 kb on + strand, within ABZR86_RS01520 at 332.244 kb on - strand, within ABZR86_RS01520 at 332.261 kb on + strand, within ABZR86_RS01520 at 332.262 kb on - strand, within ABZR86_RS01520 at 332.682 kb on + strand at 332.978 kb on - strand, within ABZR86_RS01525 at 333.594 kb on - strand, within ABZR86_RS01525
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.008 mg/ml remove 330,128 + ABZR86_RS01515 0.74 +0.2 330,129 - ABZR86_RS01515 0.75 -2.0 330,205 - ABZR86_RS01515 0.82 -0.5 330,205 - ABZR86_RS01515 0.82 +0.2 330,317 + +0.3 330,449 + -0.4 330,449 + +0.9 330,449 + -0.3 330,450 - -0.7 330,450 - -0.5 330,450 - +0.1 330,450 - -0.2 330,450 - -0.5 330,522 + -0.4 330,522 + -0.6 330,522 + -0.9 330,523 - -3.4 330,679 + +0.5 330,679 + -0.3 330,679 + +0.6 330,726 - +0.0 330,798 + -0.7 330,798 + -0.3 330,798 + +0.3 330,799 - -0.2 330,823 - -1.3 330,823 - +1.2 330,823 - -0.1 330,836 + +0.5 330,885 - -0.2 330,916 + -0.2 330,916 + +0.3 330,916 + -0.4 330,917 - -0.1 330,917 - -0.5 330,917 - -2.7 330,917 - +0.2 330,945 - +0.9 330,971 + -0.8 330,971 + +0.7 330,972 - +0.5 331,165 - +0.1 331,367 + ABZR86_RS01520 0.17 -0.2 331,368 - ABZR86_RS01520 0.17 +0.5 331,368 - ABZR86_RS01520 0.17 +0.4 331,433 + ABZR86_RS01520 0.21 +0.3 331,433 + ABZR86_RS01520 0.21 -2.0 331,433 + ABZR86_RS01520 0.21 +0.8 331,433 + ABZR86_RS01520 0.21 +0.2 331,434 - ABZR86_RS01520 0.21 -0.2 331,434 - ABZR86_RS01520 0.21 -0.3 331,514 + ABZR86_RS01520 0.27 -0.3 331,515 - ABZR86_RS01520 0.27 -0.1 331,690 + ABZR86_RS01520 0.38 -1.8 331,703 + ABZR86_RS01520 0.39 -0.2 331,704 - ABZR86_RS01520 0.39 +0.5 331,704 - ABZR86_RS01520 0.39 -0.1 331,706 + ABZR86_RS01520 0.39 +0.1 331,707 - ABZR86_RS01520 0.39 +0.3 331,728 - ABZR86_RS01520 0.41 -0.6 331,862 + ABZR86_RS01520 0.50 -1.2 331,865 + ABZR86_RS01520 0.50 -0.5 331,865 + ABZR86_RS01520 0.50 -0.2 331,866 - ABZR86_RS01520 0.50 -0.1 331,866 - ABZR86_RS01520 0.50 +0.4 331,866 - ABZR86_RS01520 0.50 +0.1 331,866 - ABZR86_RS01520 0.50 -0.1 332,000 + ABZR86_RS01520 0.59 +0.7 332,000 + ABZR86_RS01520 0.59 +0.3 332,243 + ABZR86_RS01520 0.75 +0.2 332,244 - ABZR86_RS01520 0.75 -0.2 332,261 + ABZR86_RS01520 0.76 -0.7 332,262 - ABZR86_RS01520 0.76 +1.1 332,682 + -0.3 332,978 - ABZR86_RS01525 0.13 -0.5 333,594 - ABZR86_RS01525 0.57 -2.4
Or see this region's nucleotide sequence