Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4896

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
5,417,369	+		Pf1N1B4_4895	0.34	-0.0
5,417,369	+		Pf1N1B4_4895	0.34	+0.7
5,417,550	-		Pf1N1B4_4895	0.51	+0.6
5,417,550	-		Pf1N1B4_4895	0.51	-2.0
5,417,550	-		Pf1N1B4_4895	0.51	+0.4
5,417,627	+		Pf1N1B4_4895	0.58	+0.6
5,417,628	-		Pf1N1B4_4895	0.58	-0.0
5,417,655	-		Pf1N1B4_4895	0.61	+1.2
5,417,861	+		Pf1N1B4_4895	0.80	-0.6
5,417,862	-		Pf1N1B4_4895	0.80	+0.5
5,417,862	-		Pf1N1B4_4895	0.80	+0.4
5,417,897	-		Pf1N1B4_4895	0.83	-1.5
5,417,900	+		Pf1N1B4_4895	0.83	-0.6
5,417,900	+		Pf1N1B4_4895	0.83	-0.8
5,417,901	-		Pf1N1B4_4895	0.83	+1.1
5,418,185	+				+0.1
5,418,186	-				-0.4
5,418,445	+		Pf1N1B4_4896	0.22	+0.9
5,418,445	+		Pf1N1B4_4896	0.22	+1.4
5,418,445	+		Pf1N1B4_4896	0.22	+1.0
5,418,446	-				+1.7
5,418,456	+		Pf1N1B4_4896	0.23	+0.4
5,418,457	-		Pf1N1B4_4896	0.24	+0.7
5,418,457	-		Pf1N1B4_4896	0.24	+0.4
5,418,510	+		Pf1N1B4_4896	0.29	-0.6
5,418,539	-		Pf1N1B4_4896	0.32	-0.1
5,418,558	+		Pf1N1B4_4896	0.33	+0.4
5,418,608	+		Pf1N1B4_4896	0.38	+0.4
5,418,681	+		Pf1N1B4_4896	0.45	-1.2
5,418,682	-		Pf1N1B4_4896	0.46	-0.6
5,418,727	+		Pf1N1B4_4896	0.50	+1.1
5,418,728	-		Pf1N1B4_4896	0.50	-0.2
5,418,728	-		Pf1N1B4_4896	0.50	+0.8
5,418,738	-		Pf1N1B4_4896	0.51	-3.1
5,418,984	+				-2.4
5,419,016	-		Pf1N1B4_4896	0.78	+1.2
5,419,096	+		Pf1N1B4_4896	0.86	+0.1
5,419,096	+		Pf1N1B4_4896	0.86	-0.8
5,419,096	+		Pf1N1B4_4896	0.86	+0.1
5,419,097	-		Pf1N1B4_4896	0.86	+0.5
5,419,097	-		Pf1N1B4_4896	0.86	+1.2
5,419,097	-				+0.4
5,419,179	-				+0.0
5,419,179	-				-2.0
5,419,179	-				+0.4
5,419,189	+				-2.2
5,419,190	-				-0.1
5,419,192	+				-1.2
5,419,287	+				-0.8
5,419,288	-				-0.4
5,419,301	+				-2.4
5,419,329	+				+1.6
5,419,330	-				-0.2
5,419,330	-				-0.6
5,419,354	+				-0.1
5,419,361	-				-1.2
5,419,441	+				-1.0
5,419,600	-		Pf1N1B4_4897	0.15	-0.9
5,419,600	-				-0.6
5,419,762	-				+0.4
5,420,145	-				-0.0
5,420,145	-		Pf1N1B4_4897	0.77	+0.4