Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4715
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
5,211,299 | + | Pf1N1B4_4713 | 0.87 | -0.1 | |
5,211,376 | + | -0.1 | |||
5,211,376 | + | -1.4 | |||
5,211,377 | - | +0.4 | |||
5,211,377 | - | -1.2 | |||
5,211,562 | + | -0.6 | |||
5,211,563 | - | +1.4 | |||
5,211,563 | - | -1.2 | |||
5,211,563 | - | +1.7 | |||
5,211,727 | - | +1.0 | |||
5,211,727 | - | +1.6 | |||
5,211,727 | - | +0.8 | |||
5,212,091 | - | Pf1N1B4_4715 | 0.40 | -0.6 | |
5,212,154 | - | Pf1N1B4_4715 | 0.48 | +0.4 | |
5,212,154 | - | Pf1N1B4_4715 | 0.48 | -1.0 | |
5,212,652 | - | +1.0 | |||
5,212,811 | + | -0.9 | |||
5,212,812 | - | +0.9 | |||
5,212,883 | + | -0.6 | |||
5,213,105 | + | Pf1N1B4_4716 | 0.35 | -0.0 | |
5,213,105 | + | Pf1N1B4_4716 | 0.35 | -0.2 | |
5,213,207 | + | Pf1N1B4_4716 | 0.44 | +0.4 | |
5,213,282 | + | Pf1N1B4_4716 | 0.51 | +1.4 | |
5,213,283 | - | Pf1N1B4_4716 | 0.51 | +0.1 | |
5,213,352 | + | Pf1N1B4_4716 | 0.58 | -0.3 | |
5,213,432 | + | Pf1N1B4_4716 | 0.65 | -0.2 |
Or see this region's nucleotide sequence