Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4223

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,678,497	+				-1.4
4,678,497	+				+1.1
4,678,497	+				-0.3
4,678,497	+				-0.8
4,678,498	-				+0.2
4,678,531	+				-0.6
4,678,604	-				-0.8
4,678,604	-				+0.6
4,678,846	+		Pf1N1B4_4222	0.38	+0.3
4,678,846	+		Pf1N1B4_4222	0.38	+0.3
4,679,011	+		Pf1N1B4_4222	0.57	-1.2
4,679,012	-		Pf1N1B4_4222	0.57	-1.1
4,679,027	-		Pf1N1B4_4222	0.59	-0.3
4,679,027	-		Pf1N1B4_4222	0.59	-1.8
4,679,027	-		Pf1N1B4_4222	0.59	-0.6
4,679,098	-		Pf1N1B4_4222	0.67	-1.4
4,679,230	+		Pf1N1B4_4222	0.83	-2.2
4,679,231	-				-0.4
4,679,234	+		Pf1N1B4_4222	0.83	-0.6
4,679,234	+		Pf1N1B4_4222	0.83	-0.6
4,679,235	-		Pf1N1B4_4222	0.83	-0.4
4,679,235	-		Pf1N1B4_4222	0.83	-2.2
4,679,290	+		Pf1N1B4_4222	0.90	-1.7
4,679,290	+		Pf1N1B4_4222	0.90	-1.0
4,679,291	-		Pf1N1B4_4222	0.90	-0.4
4,679,291	-		Pf1N1B4_4222	0.90	+1.2
4,679,291	-		Pf1N1B4_4222	0.90	-0.2
4,679,335	+				-0.0
4,679,336	-				+1.4
4,679,345	-				+0.2
4,679,347	+				+0.3
4,679,347	+				-2.2
4,679,347	+				-0.2
4,679,347	+				+1.3
4,679,348	-				+1.2
4,679,348	-				-0.0
4,679,348	-				-0.2
4,679,353	+				-0.0
4,679,377	+				-0.0
4,679,377	+				+0.6
4,679,501	+		Pf1N1B4_4223	0.13	-0.8
4,679,502	-				+0.6
4,679,734	+		Pf1N1B4_4223	0.39	-0.8
4,679,734	+		Pf1N1B4_4223	0.39	+1.2
4,679,807	+		Pf1N1B4_4223	0.47	+0.0
4,679,884	-				+0.6
4,679,933	+				+0.6
4,679,934	-		Pf1N1B4_4223	0.61	-1.6
4,679,934	-		Pf1N1B4_4223	0.61	-0.6
4,680,137	-		Pf1N1B4_4223	0.84	+0.2
4,680,244	-				-0.4
4,680,303	+				-0.4
4,680,380	-				+2.0
4,680,403	-				-0.9
4,680,433	+				-1.0
4,680,433	+				-0.8
4,680,437	+				-0.7
4,680,437	+				-0.4
4,680,438	-				-1.0
4,680,542	+				+0.4
4,680,793	+				+1.0
4,680,946	+				-0.0
4,680,946	+				-0.1
4,680,946	+				+1.0
4,680,947	-				-0.4
4,680,982	+				+0.6
4,680,982	+				-2.2
4,681,083	+				+0.2
4,681,083	+		Pf1N1B4_4225	0.14	-0.7