Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4041

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,491,816	+		Pf1N1B4_4039	0.88	-2.5
4,491,817	-		Pf1N1B4_4039	0.89	-1.2
4,491,817	-		Pf1N1B4_4039	0.89	-0.1
4,491,817	-		Pf1N1B4_4039	0.89	+0.1
4,491,828	+		Pf1N1B4_4039	0.89	-2.0
4,491,829	-		Pf1N1B4_4039	0.89	+0.7
4,491,987	+				+0.8
4,491,988	-				-0.3
4,492,000	-				+0.7
4,492,000	-				-1.0
4,492,025	+				-1.7
4,492,025	+				-1.7
4,492,026	-				-1.1
4,492,026	-				-0.1
4,492,026	-				-2.7
4,492,026	-				-0.3
4,492,048	-				-0.4
4,492,048	-				+1.7
4,492,048	-				-0.8
4,492,048	-				-0.3
4,492,079	-				-1.1
4,492,079	-				+0.1
4,492,079	-				+1.2
4,492,079	-				-0.6
4,492,079	-				-0.9
4,492,133	-				-2.3
4,492,296	+		Pf1N1B4_4040	0.30	+1.1
4,492,297	-		Pf1N1B4_4040	0.30	-2.1
4,492,350	+		Pf1N1B4_4040	0.38	+0.1
4,492,351	-		Pf1N1B4_4040	0.38	-0.9
4,492,396	+				-0.3
4,492,563	+		Pf1N1B4_4040	0.69	-1.1
4,492,585	+		Pf1N1B4_4040	0.73	-0.7
4,492,586	-		Pf1N1B4_4040	0.73	-1.1
4,492,761	+				+0.1
4,492,762	-				-0.7
4,492,853	-		Pf1N1B4_4041	0.18	-2.0
4,492,853	-		Pf1N1B4_4041	0.18	-0.8
4,492,853	-		Pf1N1B4_4041	0.18	+0.3
4,492,879	-		Pf1N1B4_4041	0.24	-0.3
4,492,994	-		Pf1N1B4_4041	0.52	-0.3
4,492,994	-		Pf1N1B4_4041	0.52	-0.3
4,493,035	-		Pf1N1B4_4041	0.62	-1.9
4,493,035	-		Pf1N1B4_4041	0.62	+0.5
4,493,035	-		Pf1N1B4_4041	0.62	-0.3
4,493,284	+				-0.3
4,493,326	-				+0.7
4,493,329	+				-0.8
4,493,330	-				-0.7
4,493,345	+				-0.3
4,493,406	+				-0.3
4,493,406	+				-0.7
4,493,406	+				-2.5
4,493,425	-				-2.1
4,493,433	+				+1.7
4,493,433	+				-2.1
4,493,433	+				-1.1
4,493,433	+				-0.6
4,493,433	+				+1.3
4,493,433	+				+1.7
4,493,433	+				-1.4
4,493,433	+				+0.7
4,493,433	+				-0.3
4,493,433	+				-0.9
4,493,433	+				-2.1
4,493,434	-				-0.7
4,493,434	-				-0.3
4,493,434	-				+0.7
4,493,434	-				-0.7
4,493,434	-				+0.3
4,493,513	+				+0.7
4,493,513	+				-0.7
4,493,513	+				+0.7
4,493,513	+				-2.1
4,493,514	-				-0.3
4,493,514	-				-0.7
4,493,514	-				+0.1
4,493,514	-				+1.7
4,493,514	-				-0.7
4,493,515	+				+1.9
4,493,515	+				-1.7
4,493,515	+				-1.7
4,493,515	+				-1.3
4,493,515	+				+0.7
4,493,516	-				-0.2
4,493,516	-				-0.1
4,493,516	-				+0.7
4,493,516	-				+0.3
4,493,551	+				-2.8
4,493,780	+				-0.8
4,493,781	-				-0.3
4,493,781	-				-1.1
4,493,825	+				-0.7
4,493,930	+				+0.1
4,494,111	-		Pf1N1B4_4042	0.20	-1.3