Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3988

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,430,023	+		Pf1N1B4_3987	0.55	+1.0
4,430,023	+		Pf1N1B4_3987	0.55	+1.3
4,430,024	-				-0.3
4,430,032	+		Pf1N1B4_3987	0.56	+0.3
4,430,032	+		Pf1N1B4_3987	0.56	+0.1
4,430,033	-		Pf1N1B4_3987	0.56	-0.9
4,430,082	+		Pf1N1B4_3987	0.60	+1.7
4,430,083	-		Pf1N1B4_3987	0.60	-1.5
4,430,086	+		Pf1N1B4_3987	0.61	-0.9
4,430,102	+		Pf1N1B4_3987	0.62	+0.4
4,430,200	+		Pf1N1B4_3987	0.70	-0.9
4,430,201	-		Pf1N1B4_3987	0.71	+0.2
4,430,201	-		Pf1N1B4_3987	0.71	-0.0
4,430,353	+		Pf1N1B4_3987	0.84	-0.0
4,430,537	-				-0.3
4,430,611	+				-1.5
4,430,611	+				+2.5
4,430,671	-				-0.5
4,430,671	-				-1.6
4,430,671	-				+1.1
4,430,753	+				+1.0
4,430,753	+				-0.9
4,430,753	+				-0.3
4,430,757	+				-0.3
4,430,757	+				-0.3
4,430,757	+				-0.8
4,430,757	+				+0.1
4,430,757	+				+0.3
4,430,758	-				-0.3
4,430,758	-				-0.5
4,430,758	-				+0.3
4,430,768	-				-1.6
4,430,847	+				+0.1
4,430,847	+				-1.3
4,430,848	-				+0.7
4,430,852	+				+0.0
4,430,905	+				-1.0
4,430,906	-				-0.2
4,431,220	+		Pf1N1B4_3988	0.20	-1.0
4,431,220	+		Pf1N1B4_3988	0.20	-0.3
4,431,221	-		Pf1N1B4_3988	0.20	-1.9
4,431,221	-		Pf1N1B4_3988	0.20	-2.1
4,431,221	-		Pf1N1B4_3988	0.20	-1.3
4,431,511	+		Pf1N1B4_3988	0.37	+0.0
4,431,512	-		Pf1N1B4_3988	0.37	-1.6
4,431,559	+		Pf1N1B4_3988	0.40	-1.5
4,431,559	+		Pf1N1B4_3988	0.40	-1.6
4,431,560	-				+1.3
4,431,560	-		Pf1N1B4_3988	0.40	+0.5
4,431,560	-		Pf1N1B4_3988	0.40	-0.3
4,431,560	-		Pf1N1B4_3988	0.40	-0.3
4,431,643	+		Pf1N1B4_3988	0.45	+0.3
4,431,644	-		Pf1N1B4_3988	0.45	+0.5
4,431,697	-		Pf1N1B4_3988	0.48	-0.3
4,431,697	-				+0.1
4,431,707	-		Pf1N1B4_3988	0.49	-0.3
4,432,109	-		Pf1N1B4_3988	0.72	-0.9
4,432,216	+		Pf1N1B4_3988	0.79	-0.3
4,432,269	+		Pf1N1B4_3988	0.82	+0.3
4,432,269	+		Pf1N1B4_3988	0.82	-0.6
4,432,273	+		Pf1N1B4_3988	0.82	-1.0
4,432,466	-				-0.0
4,432,618	+				-0.6
4,432,618	+				+0.9
4,432,619	-				-0.0
4,432,619	-				-2.1
4,432,742	+		Pf1N1B4_3989	0.12	-1.3
4,432,742	+		Pf1N1B4_3989	0.12	+1.2
4,432,743	-		Pf1N1B4_3989	0.12	-2.3
4,432,743	-		Pf1N1B4_3989	0.12	-1.9
4,432,743	-		Pf1N1B4_3989	0.12	-1.2
4,432,834	+		Pf1N1B4_3989	0.20	+0.7
4,432,835	-				+0.7
4,432,860	-		Pf1N1B4_3989	0.23	-1.5
4,433,059	+		Pf1N1B4_3989	0.42	+0.4
4,433,060	-		Pf1N1B4_3989	0.42	-0.3
4,433,060	-		Pf1N1B4_3989	0.42	-0.6
4,433,104	+		Pf1N1B4_3989	0.46	+0.1
4,433,104	+		Pf1N1B4_3989	0.46	-0.4
4,433,105	-		Pf1N1B4_3989	0.46	-0.3
4,433,160	+		Pf1N1B4_3989	0.51	-0.3
4,433,161	-		Pf1N1B4_3989	0.51	-1.1
4,433,161	-		Pf1N1B4_3989	0.51	+0.2
4,433,163	+		Pf1N1B4_3989	0.51	+0.1
4,433,247	+		Pf1N1B4_3989	0.59	-0.3
4,433,247	+		Pf1N1B4_3989	0.59	+2.3
4,433,247	+				+0.1
4,433,277	+		Pf1N1B4_3989	0.62	+1.7
4,433,277	+		Pf1N1B4_3989	0.62	+0.6
4,433,455	+		Pf1N1B4_3989	0.79	+1.0
4,433,455	+		Pf1N1B4_3989	0.79	-1.2
4,433,455	+		Pf1N1B4_3989	0.79	-0.1
4,433,552	+		Pf1N1B4_3989	0.88	+0.3