Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3584

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,993,599	+				-0.9
3,993,599	+				+0.1
3,993,600	-				-0.1
3,993,635	+				+1.9
3,993,636	-				-0.3
3,993,687	-				+0.9
3,993,817	-				-1.1
3,993,817	-		Pf1N1B4_3583	0.17	-1.5
3,993,817	-		Pf1N1B4_3583	0.17	-0.9
3,993,823	-				+0.9
3,993,957	+		Pf1N1B4_3583	0.36	-0.5
3,994,064	+		Pf1N1B4_3583	0.51	+0.9
3,994,065	-		Pf1N1B4_3583	0.51	-0.5
3,994,065	-		Pf1N1B4_3583	0.51	-0.7
3,994,200	+		Pf1N1B4_3583	0.69	+0.9
3,994,228	-		Pf1N1B4_3583	0.73	+1.3
3,994,228	-		Pf1N1B4_3583	0.73	+1.4
3,994,329	+		Pf1N1B4_3583	0.87	-0.2
3,994,330	-		Pf1N1B4_3583	0.87	-1.0
3,994,588	-				+0.9
3,994,590	+				-0.6
3,994,590	+				-0.0
3,994,591	-				-0.8
3,994,591	-				+0.9
3,994,591	-				-0.1
3,994,599	+				-0.7
3,994,600	-				-1.7
3,994,701	+				+1.6
3,994,702	-				+0.1
3,994,702	-				-1.1
3,994,755	+				-0.7
3,994,755	+				-1.1
3,994,755	+				+1.5
3,994,755	+				+0.1
3,994,839	+		Pf1N1B4_3584	0.12	+0.3
3,994,844	+		Pf1N1B4_3584	0.12	-0.1
3,994,844	+		Pf1N1B4_3584	0.12	+1.3
3,994,844	+		Pf1N1B4_3584	0.12	-1.1
3,994,844	+		Pf1N1B4_3584	0.12	+0.3
3,994,845	-		Pf1N1B4_3584	0.12	-2.1
3,994,845	-		Pf1N1B4_3584	0.12	+0.2
3,994,869	+		Pf1N1B4_3584	0.13	+0.6
3,994,869	+		Pf1N1B4_3584	0.13	+0.9
3,994,870	-		Pf1N1B4_3584	0.13	-0.3
3,994,870	-		Pf1N1B4_3584	0.13	-0.7
3,994,887	+		Pf1N1B4_3584	0.14	-0.5
3,994,887	+		Pf1N1B4_3584	0.14	-1.7
3,994,888	-		Pf1N1B4_3584	0.14	-0.1
3,994,888	-		Pf1N1B4_3584	0.14	+0.0
3,994,888	-		Pf1N1B4_3584	0.14	-0.1
3,994,888	-		Pf1N1B4_3584	0.14	-0.8
3,994,888	-		Pf1N1B4_3584	0.14	+0.3
3,994,896	+		Pf1N1B4_3584	0.14	-1.1
3,994,897	-				+0.9
3,994,899	+		Pf1N1B4_3584	0.14	-0.7
3,994,918	+		Pf1N1B4_3584	0.15	+0.9
3,994,965	+				+1.5
3,994,966	-		Pf1N1B4_3584	0.17	-0.1
3,994,977	+		Pf1N1B4_3584	0.17	+1.6
3,994,977	+		Pf1N1B4_3584	0.17	+0.5
3,994,978	-		Pf1N1B4_3584	0.17	+1.6
3,994,978	-		Pf1N1B4_3584	0.17	-0.7
3,994,978	-				+0.9
3,994,978	-		Pf1N1B4_3584	0.17	-1.1
3,994,992	+		Pf1N1B4_3584	0.17	-1.1
3,994,993	-		Pf1N1B4_3584	0.18	+1.0
3,995,028	+		Pf1N1B4_3584	0.19	+0.2
3,995,082	+		Pf1N1B4_3584	0.21	-0.1
3,995,083	-		Pf1N1B4_3584	0.21	+1.5
3,995,083	-		Pf1N1B4_3584	0.21	+0.7
3,995,083	-		Pf1N1B4_3584	0.21	+0.6
3,995,085	+		Pf1N1B4_3584	0.21	+0.1
3,995,085	+		Pf1N1B4_3584	0.21	-0.5
3,995,085	+		Pf1N1B4_3584	0.21	-0.9
3,995,086	-		Pf1N1B4_3584	0.21	+0.9
3,995,086	-		Pf1N1B4_3584	0.21	+1.2
3,995,086	-		Pf1N1B4_3584	0.21	+0.5
3,995,127	+		Pf1N1B4_3584	0.22	-0.3
3,995,127	+		Pf1N1B4_3584	0.22	+0.0
3,995,127	+		Pf1N1B4_3584	0.22	-0.1
3,995,127	+		Pf1N1B4_3584	0.22	+1.9
3,995,128	-		Pf1N1B4_3584	0.22	+0.6
3,995,427	+		Pf1N1B4_3584	0.32	+1.9
3,995,427	+		Pf1N1B4_3584	0.32	+0.6
3,995,427	+		Pf1N1B4_3584	0.32	-0.1
3,995,427	+		Pf1N1B4_3584	0.32	-0.7
3,995,427	+		Pf1N1B4_3584	0.32	-0.4
3,995,427	+		Pf1N1B4_3584	0.32	-0.0
3,995,428	-		Pf1N1B4_3584	0.32	-1.7
3,995,428	-				-1.7
3,995,428	-		Pf1N1B4_3584	0.32	-0.4
3,995,428	-		Pf1N1B4_3584	0.32	-1.4
3,995,428	-		Pf1N1B4_3584	0.32	-0.5
3,995,445	+		Pf1N1B4_3584	0.33	-0.7
3,995,555	+		Pf1N1B4_3584	0.37	-0.7
3,995,555	+		Pf1N1B4_3584	0.37	+2.9
3,995,555	+				-1.1
3,995,556	-		Pf1N1B4_3584	0.37	-0.3
3,995,556	-		Pf1N1B4_3584	0.37	-1.7
3,995,556	-		Pf1N1B4_3584	0.37	+1.3
3,995,556	-		Pf1N1B4_3584	0.37	-0.4
3,995,556	-		Pf1N1B4_3584	0.37	-0.1
3,995,556	-		Pf1N1B4_3584	0.37	+0.5
3,995,572	-		Pf1N1B4_3584	0.37	-0.8
3,996,054	+		Pf1N1B4_3584	0.54	+0.9
3,996,054	+				-0.1
3,996,054	+				-1.4
3,996,054	+		Pf1N1B4_3584	0.54	-0.2
3,996,843	+		Pf1N1B4_3584	0.80	+0.3
3,996,844	-		Pf1N1B4_3584	0.81	+0.9
3,997,051	-		Pf1N1B4_3584	0.88	-0.7
3,997,170	+				-0.2
3,997,332	+				+0.3
3,997,367	+				+0.3
3,997,414	-				-0.7
3,997,431	-				+0.1
3,997,431	-				+2.5
3,997,575	+				+0.9
3,997,615	-		Pf1N1B4_3585	0.17	-0.6
3,997,719	+		Pf1N1B4_3585	0.27	-1.4
3,997,719	+		Pf1N1B4_3585	0.27	-0.5
3,997,720	-		Pf1N1B4_3585	0.27	-2.3
3,998,274	+		Pf1N1B4_3585	0.83	-0.7
3,998,303	+		Pf1N1B4_3585	0.86	+0.4
3,998,303	+		Pf1N1B4_3585	0.86	-0.4