Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3498

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,902,212	+		Pf1N1B4_3496	0.23	+0.3
3,902,213	-		Pf1N1B4_3496	0.23	+1.1
3,902,213	-		Pf1N1B4_3496	0.23	-0.1
3,902,381	+		Pf1N1B4_3496	0.65	-0.4
3,902,440	+		Pf1N1B4_3496	0.80	-1.0
3,902,440	+		Pf1N1B4_3496	0.80	-0.9
3,902,440	+		Pf1N1B4_3496	0.80	-0.3
3,902,440	+		Pf1N1B4_3496	0.80	-0.8
3,902,440	+		Pf1N1B4_3496	0.80	-1.1
3,902,440	+		Pf1N1B4_3496	0.80	-0.3
3,902,440	+		Pf1N1B4_3496	0.80	+0.1
3,902,440	+		Pf1N1B4_3496	0.80	+0.7
3,902,440	+		Pf1N1B4_3496	0.80	+0.7
3,902,440	+		Pf1N1B4_3496	0.80	-0.8
3,902,440	+		Pf1N1B4_3496	0.80	+1.5
3,902,440	+		Pf1N1B4_3496	0.80	-1.8
3,902,440	+		Pf1N1B4_3496	0.80	-0.2
3,902,440	+		Pf1N1B4_3496	0.80	+0.2
3,902,440	+		Pf1N1B4_3496	0.80	-0.1
3,902,440	+		Pf1N1B4_3496	0.80	+0.2
3,902,440	+		Pf1N1B4_3496	0.80	+0.2
3,902,440	+		Pf1N1B4_3496	0.80	-0.3
3,902,440	+		Pf1N1B4_3496	0.80	-1.2
3,902,440	+		Pf1N1B4_3496	0.80	+1.3
3,902,440	+		Pf1N1B4_3496	0.80	-1.0
3,902,441	-		Pf1N1B4_3496	0.80	-0.7
3,902,441	-		Pf1N1B4_3496	0.80	-0.1
3,902,441	-		Pf1N1B4_3496	0.80	+0.9
3,902,441	-		Pf1N1B4_3496	0.80	-0.1
3,902,441	-		Pf1N1B4_3496	0.80	+0.9
3,902,441	-		Pf1N1B4_3496	0.80	-0.1
3,902,441	-				-0.7
3,902,441	-		Pf1N1B4_3496	0.80	-1.1
3,902,441	-		Pf1N1B4_3496	0.80	+0.0
3,902,441	-		Pf1N1B4_3496	0.80	+1.1
3,902,441	-		Pf1N1B4_3496	0.80	+0.3
3,902,441	-		Pf1N1B4_3496	0.80	-0.0
3,902,441	-		Pf1N1B4_3496	0.80	+0.4
3,902,441	-		Pf1N1B4_3496	0.80	+0.5
3,902,441	-		Pf1N1B4_3496	0.80	+0.3
3,902,441	-		Pf1N1B4_3496	0.80	+2.8
3,902,441	-		Pf1N1B4_3496	0.80	-0.6
3,902,441	-		Pf1N1B4_3496	0.80	-0.5
3,902,441	-		Pf1N1B4_3496	0.80	+0.0
3,902,546	+				-0.3
3,902,546	+				-0.7
3,902,546	+				+0.9
3,902,546	+				-1.4
3,902,546	+				+0.4
3,902,546	+				-1.3
3,902,546	+				-0.7
3,902,546	+				+0.9
3,902,546	+				+2.5
3,902,546	+				+0.7
3,902,547	-				+1.1
3,902,547	-				+0.6
3,902,547	-				-0.9
3,902,547	-				-2.3
3,902,547	-				+0.1
3,902,585	+				-1.1
3,902,708	+				+0.9
3,902,708	+				+3.5
3,902,709	-				-1.0
3,902,709	-				+0.3
3,902,709	-				+0.3
3,902,709	-				+0.3
3,902,951	+		Pf1N1B4_3497	0.49	+0.9
3,902,952	-		Pf1N1B4_3497	0.49	+0.5
3,902,952	-		Pf1N1B4_3497	0.49	-1.1
3,902,953	+				+2.7
3,902,953	+		Pf1N1B4_3497	0.49	+0.5
3,902,954	-		Pf1N1B4_3497	0.49	+1.9
3,902,989	+		Pf1N1B4_3497	0.58	-0.1
3,902,990	-		Pf1N1B4_3497	0.58	+0.2
3,903,031	+		Pf1N1B4_3497	0.68	+1.6
3,903,031	+		Pf1N1B4_3497	0.68	-0.1
3,903,031	+		Pf1N1B4_3497	0.68	+0.6
3,903,032	-		Pf1N1B4_3497	0.69	-0.7
3,903,032	-		Pf1N1B4_3497	0.69	+0.1
3,903,070	+		Pf1N1B4_3497	0.78	+0.1
3,903,452	+		Pf1N1B4_3498	0.68	-0.1
3,903,462	-				-0.7
3,903,462	-		Pf1N1B4_3498	0.70	-2.3
3,903,475	+		Pf1N1B4_3498	0.73	-0.5
3,903,478	+		Pf1N1B4_3498	0.74	-1.1
3,903,478	+		Pf1N1B4_3498	0.74	+0.9
3,903,479	-		Pf1N1B4_3498	0.74	-0.3
3,903,479	-		Pf1N1B4_3498	0.74	-0.5
3,903,571	-				+0.1
3,903,605	+				-0.1
3,903,605	+				+2.5
3,903,605	+				+1.4
3,903,605	+				+2.2
3,903,606	-				+2.9
3,903,606	-				+1.9
3,903,606	-				-0.1
3,903,614	+				-0.9
3,903,654	+				+0.1
3,903,654	+				-0.9
3,903,655	-				+1.9
3,903,655	-				-0.2
3,903,715	+				-0.4
3,903,786	+				-1.1
3,903,787	-				-0.7
3,903,918	+		Pf1N1B4_3499	0.13	-1.3
3,903,919	-		Pf1N1B4_3499	0.13	-0.3
3,904,238	+		Pf1N1B4_3500	0.12	-0.3
3,904,238	+		Pf1N1B4_3500	0.12	+1.5
3,904,238	+		Pf1N1B4_3500	0.12	-1.1
3,904,238	+		Pf1N1B4_3500	0.12	-0.1
3,904,238	+		Pf1N1B4_3500	0.12	+0.6
3,904,238	+		Pf1N1B4_3500	0.12	-0.3
3,904,239	-		Pf1N1B4_3500	0.12	+0.7
3,904,330	-		Pf1N1B4_3500	0.21	+0.3
3,904,330	-		Pf1N1B4_3500	0.21	+0.3
3,904,421	+		Pf1N1B4_3500	0.31	-1.2
3,904,421	+		Pf1N1B4_3500	0.31	-1.1
3,904,421	+		Pf1N1B4_3500	0.31	+0.9
3,904,421	+		Pf1N1B4_3500	0.31	-0.2
3,904,422	-		Pf1N1B4_3500	0.31	-1.8