Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3143

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,524,818	+		Pf1N1B4_3141	0.48	+1.0
3,524,819	-		Pf1N1B4_3141	0.49	+0.3
3,525,005	-				-1.3
3,525,005	-				-1.3
3,525,062	+				-0.9
3,525,062	+				+1.3
3,525,062	+				+0.0
3,525,062	+				+0.1
3,525,063	-				-0.8
3,525,063	-				-1.0
3,525,063	-				+1.0
3,525,063	-				+0.3
3,525,130	-				+1.0
3,525,174	+				+0.2
3,525,174	+				+1.0
3,525,174	+				-0.3
3,525,316	+		Pf1N1B4_3142	0.30	+0.2
3,525,317	-		Pf1N1B4_3142	0.30	+0.0
3,525,325	+		Pf1N1B4_3142	0.32	+0.0
3,525,325	+		Pf1N1B4_3142	0.32	+0.6
3,525,325	+				+2.0
3,525,326	-		Pf1N1B4_3142	0.32	+0.2
3,525,326	-		Pf1N1B4_3142	0.32	+0.3
3,525,326	-		Pf1N1B4_3142	0.32	-0.5
3,525,473	+		Pf1N1B4_3142	0.61	-0.8
3,525,474	-		Pf1N1B4_3142	0.61	-0.5
3,525,565	+		Pf1N1B4_3142	0.80	+0.6
3,525,565	+		Pf1N1B4_3142	0.80	+0.3
3,525,565	+		Pf1N1B4_3142	0.80	-0.1
3,525,728	+				-0.4
3,525,729	-				-2.5
3,525,735	+				+0.5
3,525,735	+				-1.1
3,525,735	+				+0.0
3,525,735	+				-0.4
3,525,939	+		Pf1N1B4_3143	0.18	-0.5
3,525,939	+		Pf1N1B4_3143	0.18	-1.5
3,526,398	+		Pf1N1B4_3143	0.62	-1.8
3,526,398	+		Pf1N1B4_3143	0.62	-1.5
3,526,551	+		Pf1N1B4_3143	0.76	-2.2
3,526,551	+		Pf1N1B4_3143	0.76	+0.2
3,526,552	-		Pf1N1B4_3143	0.76	-2.1
3,526,617	+		Pf1N1B4_3143	0.82	-2.7
3,526,617	+		Pf1N1B4_3143	0.82	+0.0
3,526,822	-				+2.0
3,527,169	+		Pf1N1B4_3144	0.74	-1.0
3,527,292	+				-0.5
3,527,293	-				-1.3
3,527,293	-				-1.1
3,527,401	+				+0.6
3,527,401	+				+0.5
3,527,401	+				-0.1
3,527,402	-				+1.0
3,527,409	+				+0.6
3,527,410	-				-1.0
3,527,410	-				-0.5
3,527,410	-				+0.6
3,527,410	-				-0.9
3,527,504	-		Pf1N1B4_3145	0.16	+0.7
3,527,644	+		Pf1N1B4_3145	0.29	+0.6
3,527,683	+		Pf1N1B4_3145	0.32	+0.7
3,527,684	-				+2.0
3,527,684	-		Pf1N1B4_3145	0.32	-2.3
3,527,796	+		Pf1N1B4_3145	0.42	-0.7
3,527,796	+		Pf1N1B4_3145	0.42	-1.0