Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2851

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,198,436	-		Pf1N1B4_2850	0.41	-0.5
3,198,513	+		Pf1N1B4_2850	0.46	+1.1
3,198,513	+		Pf1N1B4_2850	0.46	+0.8
3,198,513	+		Pf1N1B4_2850	0.46	+0.1
3,198,513	+		Pf1N1B4_2850	0.46	+1.1
3,198,513	+		Pf1N1B4_2850	0.46	-0.2
3,198,513	+		Pf1N1B4_2850	0.46	+0.7
3,198,514	-		Pf1N1B4_2850	0.46	-0.5
3,198,595	-		Pf1N1B4_2850	0.51	-0.5
3,198,696	+		Pf1N1B4_2850	0.57	+0.8
3,198,867	+				-0.7
3,198,868	-		Pf1N1B4_2850	0.67	+1.7
3,199,049	+		Pf1N1B4_2850	0.78	-0.5
3,199,049	+		Pf1N1B4_2850	0.78	-0.7
3,199,049	+		Pf1N1B4_2850	0.78	+0.4
3,199,049	+		Pf1N1B4_2850	0.78	+0.5
3,199,049	+		Pf1N1B4_2850	0.78	+0.1
3,199,049	+		Pf1N1B4_2850	0.78	-0.2
3,199,049	+		Pf1N1B4_2850	0.78	-0.5
3,199,049	+		Pf1N1B4_2850	0.78	-2.3
3,199,049	+		Pf1N1B4_2850	0.78	+0.4
3,199,050	-		Pf1N1B4_2850	0.78	-1.2
3,199,050	-		Pf1N1B4_2850	0.78	-0.5
3,199,050	-		Pf1N1B4_2850	0.78	-0.9
3,199,050	-		Pf1N1B4_2850	0.78	-1.7
3,199,050	-		Pf1N1B4_2850	0.78	+0.5
3,199,050	-		Pf1N1B4_2850	0.78	+1.1
3,199,252	-				+2.4
3,199,291	+				+1.1
3,199,291	+				-0.9
3,199,410	+				-0.5
3,199,410	+				+0.6
3,199,410	+				+0.7
3,199,411	-				+0.5
3,199,411	-				-2.0
3,199,436	+		Pf1N1B4_2851	0.29	+0.3
3,199,437	-		Pf1N1B4_2851	0.30	-2.2
3,199,437	-		Pf1N1B4_2851	0.30	-0.6
3,199,461	+		Pf1N1B4_2851	0.47	-1.2
3,199,530	+				+0.1
3,199,531	-				+0.8
3,199,531	-				+0.3
3,199,531	-				-1.2
3,199,531	-				+0.8
3,199,535	+				+0.1
3,199,535	+				-0.9
3,199,535	+				+0.2
3,199,591	+				+0.4
3,199,592	-				-1.4
3,199,598	+				+0.3
3,199,598	+				+1.9
3,199,598	+				-0.9
3,199,598	+				+0.1
3,199,599	-				+0.1
3,199,599	-				+0.4
3,199,599	-				+0.5
3,199,710	+		Pf1N1B4_2852	0.16	-0.6
3,199,710	+		Pf1N1B4_2852	0.16	+1.3
3,199,710	+		Pf1N1B4_2852	0.16	+0.8
3,199,710	+		Pf1N1B4_2852	0.16	-0.7
3,199,710	+		Pf1N1B4_2852	0.16	-1.5
3,199,710	+				-0.1
3,199,710	+		Pf1N1B4_2852	0.16	+0.4
3,199,710	+		Pf1N1B4_2852	0.16	-0.5
3,199,710	+		Pf1N1B4_2852	0.16	+0.6
3,199,710	+		Pf1N1B4_2852	0.16	+1.3
3,199,711	-		Pf1N1B4_2852	0.16	-0.2
3,199,711	-		Pf1N1B4_2852	0.16	+0.0
3,199,711	-		Pf1N1B4_2852	0.16	-0.5
3,199,711	-		Pf1N1B4_2852	0.16	+1.1
3,199,711	-		Pf1N1B4_2852	0.16	+0.1
3,199,711	-		Pf1N1B4_2852	0.16	+0.3
3,199,711	-		Pf1N1B4_2852	0.16	+0.8
3,199,711	-		Pf1N1B4_2852	0.16	+0.2
3,199,711	-		Pf1N1B4_2852	0.16	+1.1
3,199,711	-		Pf1N1B4_2852	0.16	-1.0
3,199,752	+		Pf1N1B4_2852	0.27	+0.1
3,199,857	+		Pf1N1B4_2852	0.55	-0.0
3,199,857	+		Pf1N1B4_2852	0.55	+0.7
3,199,890	+		Pf1N1B4_2852	0.63	-1.9
3,199,890	+		Pf1N1B4_2852	0.63	-0.5
3,199,890	+		Pf1N1B4_2852	0.63	+1.1
3,199,890	+		Pf1N1B4_2852	0.63	-0.0
3,199,890	+		Pf1N1B4_2852	0.63	-1.7
3,199,890	+		Pf1N1B4_2852	0.63	-1.0
3,199,890	+		Pf1N1B4_2852	0.63	+1.4
3,199,891	-		Pf1N1B4_2852	0.64	+0.3
3,199,891	-		Pf1N1B4_2852	0.64	-1.2
3,199,891	-		Pf1N1B4_2852	0.64	-0.0
3,199,908	+		Pf1N1B4_2852	0.68	-1.2
3,199,908	+		Pf1N1B4_2852	0.68	+0.2
3,199,909	-		Pf1N1B4_2852	0.68	+0.4
3,199,909	-		Pf1N1B4_2852	0.68	+2.1
3,199,965	+		Pf1N1B4_2852	0.83	+0.8
3,199,965	+		Pf1N1B4_2852	0.83	-0.4
3,200,093	+				-0.0
3,200,093	+				-1.2
3,200,093	+				-0.1
3,200,093	+				+1.1
3,200,093	+				-0.7
3,200,093	+				-0.5
3,200,093	+				-0.1
3,200,094	-				-0.0
3,200,094	-				-0.8
3,200,149	+				-0.3
3,200,149	+				+0.6
3,200,152	+				+0.4
3,200,152	+				-1.5
3,200,153	-				+1.1
3,200,219	+				-0.6
3,200,226	+				+1.8
3,200,226	+				-1.0
3,200,362	-		Pf1N1B4_2853	0.16	+0.1
3,200,441	-		Pf1N1B4_2853	0.25	+1.4
3,200,472	+		Pf1N1B4_2853	0.29	-0.2