Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2296

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,613,055	+		Pf1N1B4_2295	0.32	+1.7
2,613,056	-		Pf1N1B4_2295	0.32	-1.0
2,613,056	-		Pf1N1B4_2295	0.32	+0.7
2,613,194	+		Pf1N1B4_2295	0.45	+0.9
2,613,194	+		Pf1N1B4_2295	0.45	-1.0
2,613,195	-		Pf1N1B4_2295	0.45	-0.0
2,613,296	+		Pf1N1B4_2295	0.55	+1.9
2,613,296	+		Pf1N1B4_2295	0.55	+0.7
2,613,296	+		Pf1N1B4_2295	0.55	+0.7
2,613,297	-		Pf1N1B4_2295	0.55	-0.7
2,613,297	-		Pf1N1B4_2295	0.55	-1.0
2,613,297	-		Pf1N1B4_2295	0.55	+0.6
2,613,297	-		Pf1N1B4_2295	0.55	-0.7
2,613,329	+		Pf1N1B4_2295	0.58	-1.7
2,613,330	-		Pf1N1B4_2295	0.59	+0.7
2,613,330	-		Pf1N1B4_2295	0.59	-0.1
2,613,330	-		Pf1N1B4_2295	0.59	+0.9
2,613,569	+		Pf1N1B4_2295	0.82	+0.5
2,613,569	+		Pf1N1B4_2295	0.82	-1.0
2,613,569	+		Pf1N1B4_2295	0.82	+0.0
2,613,570	-		Pf1N1B4_2295	0.82	-0.6
2,613,570	-		Pf1N1B4_2295	0.82	+1.1
2,613,571	+		Pf1N1B4_2295	0.82	+0.3
2,613,572	-		Pf1N1B4_2295	0.82	+0.1
2,613,639	-		Pf1N1B4_2295	0.89	+0.3
2,613,639	-		Pf1N1B4_2295	0.89	+2.5
2,613,720	-				+2.8
2,613,752	+				-0.3
2,613,752	+				+0.3
2,613,752	+				+0.7
2,613,752	+				+1.9
2,613,752	+				-0.5
2,613,752	+				-0.7
2,613,752	+				-1.0
2,613,752	+				+0.3
2,613,753	-				-0.5
2,613,753	-				-1.3
2,613,753	-				+0.3
2,613,753	-				-1.3
2,613,753	-				+0.0
2,613,907	+				+0.1
2,613,939	+				+2.5
2,613,939	+				-1.9
2,613,939	+				+0.7
2,613,939	+				-0.5
2,614,140	+		Pf1N1B4_2296	0.23	+0.5
2,614,140	+		Pf1N1B4_2296	0.23	-0.7
2,614,255	+		Pf1N1B4_2296	0.33	+0.3
2,614,256	-		Pf1N1B4_2296	0.33	+0.5
2,614,258	-		Pf1N1B4_2296	0.33	+1.3
2,614,317	+		Pf1N1B4_2296	0.39	+1.3
2,614,317	+		Pf1N1B4_2296	0.39	+1.7
2,614,318	-		Pf1N1B4_2296	0.39	+1.3
2,614,350	+		Pf1N1B4_2296	0.42	-0.2
2,614,722	+		Pf1N1B4_2296	0.74	+0.3
2,614,723	-		Pf1N1B4_2296	0.74	+0.7
2,614,869	+		Pf1N1B4_2296	0.87	-0.0
2,614,982	+				-0.3
2,614,983	-				-1.5
2,614,983	-				-0.5
2,614,983	-				-0.8
2,614,996	+				-0.1
2,614,996	+				-1.0
2,614,996	+				-0.1
2,615,055	-				-0.0
2,615,078	+		Pf1N1B4_2297	0.12	+0.3
2,615,078	+		Pf1N1B4_2297	0.12	-0.9
2,615,264	+		Pf1N1B4_2297	0.45	-0.5
2,615,264	+		Pf1N1B4_2297	0.45	-0.2
2,615,264	+		Pf1N1B4_2297	0.45	-0.9
2,615,312	+		Pf1N1B4_2297	0.54	-0.5
2,615,312	+		Pf1N1B4_2297	0.54	+1.6
2,615,312	+		Pf1N1B4_2297	0.54	-1.4
2,615,360	+		Pf1N1B4_2297	0.62	-0.0
2,615,361	-		Pf1N1B4_2297	0.63	-0.1
2,615,567	+				+0.3
2,615,630	+				+0.3
2,615,630	+				-0.3
2,615,636	+				-0.8
2,615,636	+				-1.5
2,615,636	+				-0.2
2,615,636	+				+0.6
2,615,636	+				+0.3
2,615,636	+				-0.0
2,615,636	+				-1.0
2,615,637	-				+0.7
2,615,637	-				-1.0
2,615,637	-				-0.9
2,615,637	-				-0.3
2,615,921	+		Pf1N1B4_2298	0.15	-0.7
2,615,922	-		Pf1N1B4_2298	0.15	+1.3
2,615,922	-		Pf1N1B4_2298	0.15	-0.3
2,615,922	-		Pf1N1B4_2298	0.15	+0.2
2,615,922	-		Pf1N1B4_2298	0.15	+0.0
2,615,922	-		Pf1N1B4_2298	0.15	-1.2
2,615,922	-		Pf1N1B4_2298	0.15	+0.5