Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_2037 and Pf1N1B4_2038 are separated by 120 nucleotides Pf1N1B4_2038 and Pf1N1B4_2039 are separated by 50 nucleotides Pf1N1B4_2039 and Pf1N1B4_2040 are separated by 11 nucleotides
Pf1N1B4_2037 - Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1), at 2,326,197 to 2,327,030
_2037
Pf1N1B4_2038 - Phosphate transport system regulatory protein PhoU, at 2,327,151 to 2,327,912
_2038
Pf1N1B4_2039 - hypothetical protein, at 2,327,963 to 2,328,082
_2039
Pf1N1B4_2040 - Phosphate regulon transcriptional regulatory protein PhoB (SphR), at 2,328,094 to 2,329,044
_2040
Position (kb)
2327
2328
2329 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2327.092 kb on + strand at 2327.092 kb on + strand at 2327.092 kb on + strand at 2327.092 kb on + strand at 2327.092 kb on + strand at 2327.092 kb on + strand at 2327.092 kb on + strand at 2327.092 kb on + strand at 2327.092 kb on + strand at 2327.092 kb on + strand at 2327.092 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.094 kb on + strand at 2327.098 kb on + strand at 2327.098 kb on + strand at 2327.098 kb on + strand at 2327.098 kb on + strand at 2327.098 kb on + strand at 2327.098 kb on + strand at 2327.098 kb on + strand at 2327.098 kb on + strand at 2327.098 kb on + strand at 2327.098 kb on + strand at 2327.159 kb on + strand at 2327.689 kb on - strand, within Pf1N1B4_2038 at 2327.906 kb on + strand at 2327.906 kb on + strand at 2327.906 kb on + strand at 2327.907 kb on - strand at 2327.910 kb on + strand at 2327.910 kb on + strand at 2327.910 kb on + strand at 2327.910 kb on + strand at 2327.910 kb on + strand at 2327.910 kb on + strand at 2327.910 kb on + strand at 2327.910 kb on + strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.911 kb on - strand at 2327.973 kb on + strand at 2327.974 kb on - strand at 2327.988 kb on + strand, within Pf1N1B4_2039 at 2327.988 kb on + strand, within Pf1N1B4_2039 at 2328.062 kb on + strand, within Pf1N1B4_2039 at 2328.062 kb on + strand, within Pf1N1B4_2039 at 2328.063 kb on - strand, within Pf1N1B4_2039 at 2328.169 kb on + strand at 2328.169 kb on + strand at 2328.169 kb on + strand at 2328.170 kb on - strand at 2328.170 kb on - strand at 2328.170 kb on - strand at 2328.170 kb on - strand at 2328.170 kb on - strand at 2328.406 kb on + strand, within Pf1N1B4_2040 at 2328.889 kb on + strand, within Pf1N1B4_2040 at 2328.985 kb on + strand at 2328.985 kb on + strand at 2328.985 kb on + strand at 2328.985 kb on + strand at 2328.985 kb on + strand at 2328.985 kb on + strand at 2328.986 kb on - strand at 2328.986 kb on - strand at 2328.986 kb on - strand at 2328.986 kb on - strand at 2329.050 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,327,092 + +1.4 2,327,092 + -0.5 2,327,092 + +0.7 2,327,092 + +0.9 2,327,092 + -0.2 2,327,092 + -0.8 2,327,092 + -0.0 2,327,092 + +1.4 2,327,092 + -1.0 2,327,092 + -0.2 2,327,092 + +0.2 2,327,094 + -0.7 2,327,094 + +0.7 2,327,094 + -0.6 2,327,094 + +1.1 2,327,094 + +2.1 2,327,094 + +1.1 2,327,094 + -0.6 2,327,094 + +0.1 2,327,094 + -2.5 2,327,094 + +1.2 2,327,094 + +0.5 2,327,094 + +0.4 2,327,094 + +1.0 2,327,094 + +0.6 2,327,098 + -1.9 2,327,098 + -0.4 2,327,098 + +0.6 2,327,098 + -0.6 2,327,098 + +0.4 2,327,098 + -0.6 2,327,098 + +0.9 2,327,098 + +0.0 2,327,098 + +2.0 2,327,098 + +0.1 2,327,159 + +2.4 2,327,689 - Pf1N1B4_2038 0.71 +0.4 2,327,906 + +0.7 2,327,906 + +1.8 2,327,906 + -2.2 2,327,907 - -1.6 2,327,910 + -0.1 2,327,910 + +1.0 2,327,910 + -0.5 2,327,910 + -0.9 2,327,910 + +1.4 2,327,910 + +1.2 2,327,910 + +0.7 2,327,910 + -0.6 2,327,911 - -0.6 2,327,911 - +1.8 2,327,911 - -0.6 2,327,911 - +0.5 2,327,911 - -0.0 2,327,911 - +0.8 2,327,911 - +1.0 2,327,911 - -0.2 2,327,911 - -0.9 2,327,911 - +0.8 2,327,911 - -0.9 2,327,911 - +0.2 2,327,911 - -0.4 2,327,973 + +1.4 2,327,974 - -0.3 2,327,988 + Pf1N1B4_2039 0.21 -0.2 2,327,988 + Pf1N1B4_2039 0.21 +0.4 2,328,062 + Pf1N1B4_2039 0.82 -1.1 2,328,062 + Pf1N1B4_2039 0.82 -2.9 2,328,063 - Pf1N1B4_2039 0.83 -0.1 2,328,169 + +0.1 2,328,169 + +0.2 2,328,169 + +0.4 2,328,170 - +0.8 2,328,170 - -1.2 2,328,170 - +0.8 2,328,170 - +0.2 2,328,170 - +0.8 2,328,406 + Pf1N1B4_2040 0.33 +1.7 2,328,889 + Pf1N1B4_2040 0.84 +1.1 2,328,985 + -0.6 2,328,985 + -1.2 2,328,985 + +0.4 2,328,985 + +0.7 2,328,985 + +0.6 2,328,985 + -0.6 2,328,986 - +1.1 2,328,986 - -0.3 2,328,986 - -0.2 2,328,986 - -1.0 2,329,050 - +0.3
Or see this region's nucleotide sequence