Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1228

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,393,088	+				+0.0
1,393,144	+				-0.4
1,393,144	+				-0.4
1,393,181	+				+0.6
1,393,182	-				+0.8
1,393,188	+				-0.8
1,393,189	-				+0.8
1,393,214	-				+2.0
1,393,225	+				+2.5
1,393,227	+				-0.4
1,393,227	+				+3.2
1,393,227	+				+0.2
1,393,228	-				+1.4
1,393,228	-				+1.2
1,393,230	+				+1.0
1,393,253	-				+0.8
1,393,364	+				+0.4
1,393,364	+				+0.4
1,393,364	+				+0.6
1,393,387	+				+0.3
1,393,387	+				+1.2
1,393,393	+				-0.4
1,393,393	+				-0.2
1,393,393	+				-0.1
1,393,393	+				-0.3
1,393,393	+				-0.6
1,393,393	+				+0.2
1,393,393	+				+0.4
1,393,393	+				+0.7
1,393,394	-				+1.8
1,393,489	+				+1.8
1,393,489	+				-0.0
1,393,490	-				+0.2
1,393,490	-				-0.4
1,393,490	-				-0.8
1,393,490	-				+0.5
1,393,500	+				+0.4
1,393,586	+		Pf1N1B4_1227	0.31	+0.4
1,393,586	+		Pf1N1B4_1227	0.31	+0.2
1,393,586	+		Pf1N1B4_1227	0.31	+0.5
1,393,587	-		Pf1N1B4_1227	0.32	+0.2
1,393,619	-		Pf1N1B4_1227	0.41	+0.7
1,393,646	+		Pf1N1B4_1227	0.49	-1.1
1,393,646	+				+2.2
1,393,646	+		Pf1N1B4_1227	0.49	+1.4
1,393,646	+		Pf1N1B4_1227	0.49	-1.7
1,393,647	-				-0.4
1,393,655	+		Pf1N1B4_1227	0.51	+0.5
1,393,656	-		Pf1N1B4_1227	0.52	-0.1
1,393,670	+		Pf1N1B4_1227	0.56	-0.8
1,393,692	-		Pf1N1B4_1227	0.62	+0.9
1,393,805	+				+2.2
1,393,806	-				+0.5
1,393,873	+				+0.2
1,393,873	+				-0.4
1,393,873	+				+0.5
1,393,874	-				-1.0
1,393,874	-				-0.8
1,393,958	-				+0.6
1,393,958	-				+0.6
1,393,978	-				+1.2
1,393,978	-				+0.4
1,394,144	+				-1.0
1,394,144	+				-0.4
1,394,144	+				-0.3
1,394,144	+				-1.8
1,394,145	-				+2.8
1,394,145	-				+0.8
1,394,303	+		Pf1N1B4_1228	0.26	-1.5
1,394,303	+		Pf1N1B4_1228	0.26	-0.6
1,394,303	+		Pf1N1B4_1228	0.26	-1.2
1,394,303	+				+1.6
1,394,303	+		Pf1N1B4_1228	0.26	-0.4
1,394,304	-		Pf1N1B4_1228	0.27	+1.2
1,394,304	-		Pf1N1B4_1228	0.27	+0.4
1,394,304	-		Pf1N1B4_1228	0.27	+0.4
1,394,304	-		Pf1N1B4_1228	0.27	+0.2
1,394,304	-		Pf1N1B4_1228	0.27	-1.2
1,394,304	-		Pf1N1B4_1228	0.27	-1.9
1,394,304	-				+1.6
1,394,304	-		Pf1N1B4_1228	0.27	-0.9
1,394,304	-		Pf1N1B4_1228	0.27	-1.2
1,395,051	+				+0.4
1,395,051	+				-0.8
1,395,193	+		Pf1N1B4_1229	0.15	+0.9
1,395,194	-				+0.2
1,395,327	+		Pf1N1B4_1229	0.24	+0.3
1,395,327	+		Pf1N1B4_1229	0.24	-0.4
1,395,327	+		Pf1N1B4_1229	0.24	+1.4
1,395,327	+		Pf1N1B4_1229	0.24	+0.5
1,395,327	+		Pf1N1B4_1229	0.24	+1.2
1,395,327	+		Pf1N1B4_1229	0.24	-0.8
1,395,327	+		Pf1N1B4_1229	0.24	+0.2
1,395,328	-		Pf1N1B4_1229	0.24	+0.8
1,395,328	-		Pf1N1B4_1229	0.24	-1.9
1,395,610	+		Pf1N1B4_1229	0.42	+0.3
1,395,736	+				-0.4
1,395,760	-		Pf1N1B4_1229	0.52	-2.5
1,395,760	-		Pf1N1B4_1229	0.52	-0.4