Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22800 and HSERO_RS22805 are separated by 51 nucleotides HSERO_RS22805 and HSERO_RS22810 are separated by 11 nucleotides
HSERO_RS22800: HSERO_RS22800 - hypothetical protein, at 5,233,873 to 5,234,586
_RS22800
HSERO_RS22805: HSERO_RS22805 - GMC family oxidoreductase, at 5,234,638 to 5,236,410
_RS22805
HSERO_RS22810: HSERO_RS22810 - alcohol dehydrogenase, at 5,236,422 to 5,237,693
_RS22810
Position (kb) 5234
5235
5236
5237 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5233.810 kb on + strand at 5233.864 kb on + strand at 5233.961 kb on - strand, within HSERO_RS22800 at 5234.001 kb on + strand, within HSERO_RS22800 at 5234.016 kb on + strand, within HSERO_RS22800 at 5234.035 kb on + strand, within HSERO_RS22800 at 5234.140 kb on + strand, within HSERO_RS22800 at 5234.148 kb on - strand, within HSERO_RS22800 at 5234.248 kb on + strand, within HSERO_RS22800 at 5234.318 kb on - strand at 5234.594 kb on + strand at 5234.729 kb on + strand at 5234.729 kb on + strand at 5234.737 kb on - strand at 5234.786 kb on + strand at 5234.786 kb on + strand at 5234.876 kb on - strand, within HSERO_RS22805 at 5234.920 kb on - strand, within HSERO_RS22805 at 5234.924 kb on + strand, within HSERO_RS22805 at 5234.949 kb on + strand, within HSERO_RS22805 at 5234.954 kb on + strand, within HSERO_RS22805 at 5235.010 kb on + strand at 5235.111 kb on + strand, within HSERO_RS22805 at 5235.228 kb on + strand, within HSERO_RS22805 at 5235.272 kb on - strand, within HSERO_RS22805 at 5235.306 kb on + strand, within HSERO_RS22805 at 5235.306 kb on + strand, within HSERO_RS22805 at 5235.314 kb on - strand, within HSERO_RS22805 at 5235.314 kb on - strand, within HSERO_RS22805 at 5235.466 kb on + strand, within HSERO_RS22805 at 5235.500 kb on - strand, within HSERO_RS22805 at 5235.749 kb on - strand, within HSERO_RS22805 at 5235.928 kb on - strand, within HSERO_RS22805 at 5235.928 kb on - strand at 5235.994 kb on - strand, within HSERO_RS22805 at 5236.036 kb on + strand, within HSERO_RS22805 at 5236.085 kb on + strand, within HSERO_RS22805 at 5236.110 kb on + strand, within HSERO_RS22805 at 5236.118 kb on - strand at 5236.129 kb on + strand, within HSERO_RS22805 at 5236.305 kb on + strand at 5236.344 kb on + strand at 5236.516 kb on - strand at 5236.656 kb on + strand, within HSERO_RS22810 at 5236.743 kb on + strand, within HSERO_RS22810 at 5237.010 kb on - strand, within HSERO_RS22810 at 5237.017 kb on + strand, within HSERO_RS22810 at 5237.127 kb on + strand, within HSERO_RS22810 at 5237.207 kb on + strand, within HSERO_RS22810 at 5237.207 kb on + strand, within HSERO_RS22810 at 5237.344 kb on - strand, within HSERO_RS22810 at 5237.380 kb on - strand, within HSERO_RS22810
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 5,233,810 + -0.1 5,233,864 + -0.9 5,233,961 - HSERO_RS22800 0.12 +0.4 5,234,001 + HSERO_RS22800 0.18 -0.1 5,234,016 + HSERO_RS22800 0.20 -0.7 5,234,035 + HSERO_RS22800 0.23 +1.3 5,234,140 + HSERO_RS22800 0.37 -0.2 5,234,148 - HSERO_RS22800 0.39 +0.5 5,234,248 + HSERO_RS22800 0.53 +0.3 5,234,318 - +0.4 5,234,594 + -0.2 5,234,729 + +0.1 5,234,729 + -0.1 5,234,737 - -1.6 5,234,786 + -0.2 5,234,786 + +0.6 5,234,876 - HSERO_RS22805 0.13 -1.0 5,234,920 - HSERO_RS22805 0.16 -0.4 5,234,924 + HSERO_RS22805 0.16 +0.0 5,234,949 + HSERO_RS22805 0.18 +0.2 5,234,954 + HSERO_RS22805 0.18 -1.5 5,235,010 + +2.0 5,235,111 + HSERO_RS22805 0.27 -0.2 5,235,228 + HSERO_RS22805 0.33 -0.0 5,235,272 - HSERO_RS22805 0.36 +1.3 5,235,306 + HSERO_RS22805 0.38 +0.4 5,235,306 + HSERO_RS22805 0.38 -0.9 5,235,314 - HSERO_RS22805 0.38 +0.6 5,235,314 - HSERO_RS22805 0.38 -0.4 5,235,466 + HSERO_RS22805 0.47 -0.4 5,235,500 - HSERO_RS22805 0.49 -0.3 5,235,749 - HSERO_RS22805 0.63 +0.9 5,235,928 - HSERO_RS22805 0.73 -2.7 5,235,928 - -1.3 5,235,994 - HSERO_RS22805 0.76 +0.2 5,236,036 + HSERO_RS22805 0.79 -0.3 5,236,085 + HSERO_RS22805 0.82 -0.7 5,236,110 + HSERO_RS22805 0.83 -0.4 5,236,118 - +2.3 5,236,129 + HSERO_RS22805 0.84 -0.7 5,236,305 + -0.6 5,236,344 + -0.2 5,236,516 - +0.0 5,236,656 + HSERO_RS22810 0.18 -1.1 5,236,743 + HSERO_RS22810 0.25 -0.5 5,237,010 - HSERO_RS22810 0.46 -0.5 5,237,017 + HSERO_RS22810 0.47 +1.9 5,237,127 + HSERO_RS22810 0.55 -0.2 5,237,207 + HSERO_RS22810 0.62 +0.4 5,237,207 + HSERO_RS22810 0.62 -0.4 5,237,344 - HSERO_RS22810 0.72 +0.1 5,237,380 - HSERO_RS22810 0.75 -0.4
Or see this region's nucleotide sequence