Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22795 and HSERO_RS22800 are separated by 367 nucleotides HSERO_RS22800 and HSERO_RS22805 are separated by 51 nucleotides
HSERO_RS22795: HSERO_RS22795 - N-acetyltransferase, at 5,232,984 to 5,233,505
_RS22795
HSERO_RS22800: HSERO_RS22800 - hypothetical protein, at 5,233,873 to 5,234,586
_RS22800
HSERO_RS22805: HSERO_RS22805 - GMC family oxidoreductase, at 5,234,638 to 5,236,410
_RS22805
Position (kb) 5233
5234
5235 Strain fitness (log2 ratio) -1
0
1
2 at 5232.913 kb on + strand at 5232.913 kb on + strand at 5232.913 kb on + strand at 5232.913 kb on + strand at 5232.913 kb on + strand at 5232.921 kb on - strand at 5232.921 kb on - strand at 5232.989 kb on + strand at 5232.989 kb on + strand at 5233.011 kb on - strand at 5233.046 kb on - strand, within HSERO_RS22795 at 5233.118 kb on + strand, within HSERO_RS22795 at 5233.173 kb on - strand, within HSERO_RS22795 at 5233.215 kb on + strand, within HSERO_RS22795 at 5233.215 kb on + strand, within HSERO_RS22795 at 5233.223 kb on - strand, within HSERO_RS22795 at 5233.314 kb on + strand, within HSERO_RS22795 at 5233.322 kb on - strand, within HSERO_RS22795 at 5233.322 kb on - strand, within HSERO_RS22795 at 5233.497 kb on + strand at 5233.505 kb on - strand at 5233.564 kb on + strand at 5233.596 kb on - strand at 5233.810 kb on + strand at 5233.864 kb on + strand at 5233.961 kb on - strand, within HSERO_RS22800 at 5234.001 kb on + strand, within HSERO_RS22800 at 5234.016 kb on + strand, within HSERO_RS22800 at 5234.035 kb on + strand, within HSERO_RS22800 at 5234.140 kb on + strand, within HSERO_RS22800 at 5234.148 kb on - strand, within HSERO_RS22800 at 5234.248 kb on + strand, within HSERO_RS22800 at 5234.318 kb on - strand at 5234.594 kb on + strand at 5234.729 kb on + strand at 5234.729 kb on + strand at 5234.737 kb on - strand at 5234.786 kb on + strand at 5234.786 kb on + strand at 5234.876 kb on - strand, within HSERO_RS22805 at 5234.920 kb on - strand, within HSERO_RS22805 at 5234.924 kb on + strand, within HSERO_RS22805 at 5234.949 kb on + strand, within HSERO_RS22805 at 5234.954 kb on + strand, within HSERO_RS22805 at 5235.010 kb on + strand at 5235.111 kb on + strand, within HSERO_RS22805 at 5235.228 kb on + strand, within HSERO_RS22805 at 5235.272 kb on - strand, within HSERO_RS22805 at 5235.306 kb on + strand, within HSERO_RS22805 at 5235.306 kb on + strand, within HSERO_RS22805 at 5235.314 kb on - strand, within HSERO_RS22805 at 5235.314 kb on - strand, within HSERO_RS22805 at 5235.466 kb on + strand, within HSERO_RS22805 at 5235.500 kb on - strand, within HSERO_RS22805
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 5,232,913 + +0.2 5,232,913 + -0.2 5,232,913 + -0.3 5,232,913 + -0.6 5,232,913 + +0.4 5,232,921 - -0.3 5,232,921 - -0.4 5,232,989 + -0.3 5,232,989 + -0.1 5,233,011 - -0.0 5,233,046 - HSERO_RS22795 0.12 +0.2 5,233,118 + HSERO_RS22795 0.26 -0.1 5,233,173 - HSERO_RS22795 0.36 +0.1 5,233,215 + HSERO_RS22795 0.44 +0.3 5,233,215 + HSERO_RS22795 0.44 +1.2 5,233,223 - HSERO_RS22795 0.46 -0.4 5,233,314 + HSERO_RS22795 0.63 -0.3 5,233,322 - HSERO_RS22795 0.65 -0.1 5,233,322 - HSERO_RS22795 0.65 -0.0 5,233,497 + -0.0 5,233,505 - -0.5 5,233,564 + +0.5 5,233,596 - -0.0 5,233,810 + -0.1 5,233,864 + -0.9 5,233,961 - HSERO_RS22800 0.12 +0.4 5,234,001 + HSERO_RS22800 0.18 -0.1 5,234,016 + HSERO_RS22800 0.20 -0.7 5,234,035 + HSERO_RS22800 0.23 +1.3 5,234,140 + HSERO_RS22800 0.37 -0.2 5,234,148 - HSERO_RS22800 0.39 +0.5 5,234,248 + HSERO_RS22800 0.53 +0.3 5,234,318 - +0.4 5,234,594 + -0.2 5,234,729 + +0.1 5,234,729 + -0.1 5,234,737 - -1.6 5,234,786 + -0.2 5,234,786 + +0.6 5,234,876 - HSERO_RS22805 0.13 -1.0 5,234,920 - HSERO_RS22805 0.16 -0.4 5,234,924 + HSERO_RS22805 0.16 +0.0 5,234,949 + HSERO_RS22805 0.18 +0.2 5,234,954 + HSERO_RS22805 0.18 -1.5 5,235,010 + +2.0 5,235,111 + HSERO_RS22805 0.27 -0.2 5,235,228 + HSERO_RS22805 0.33 -0.0 5,235,272 - HSERO_RS22805 0.36 +1.3 5,235,306 + HSERO_RS22805 0.38 +0.4 5,235,306 + HSERO_RS22805 0.38 -0.9 5,235,314 - HSERO_RS22805 0.38 +0.6 5,235,314 - HSERO_RS22805 0.38 -0.4 5,235,466 + HSERO_RS22805 0.47 -0.4 5,235,500 - HSERO_RS22805 0.49 -0.3
Or see this region's nucleotide sequence