Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22375 and HSERO_RS22380 are separated by 195 nucleotides HSERO_RS22380 and HSERO_RS22385 are separated by 50 nucleotides HSERO_RS22385 and HSERO_RS22390 are separated by 58 nucleotides
HSERO_RS22375: HSERO_RS22375 - hypothetical protein, at 5,120,568 to 5,121,488
_RS22375
HSERO_RS22380: HSERO_RS22380 - hypothetical protein, at 5,121,684 to 5,122,391
_RS22380
HSERO_RS22385: HSERO_RS22385 - GMC family oxidoreductase, at 5,122,442 to 5,124,223
_RS22385
HSERO_RS22390: HSERO_RS22390 - alcohol dehydrogenase, at 5,124,282 to 5,125,682
_RS22390
Position (kb) 5122
5123
5124
5125 Strain fitness (log2 ratio) -1
0
1 at 5121.533 kb on + strand at 5121.627 kb on + strand at 5121.632 kb on + strand at 5121.857 kb on + strand, within HSERO_RS22380 at 5121.955 kb on - strand, within HSERO_RS22380 at 5122.128 kb on + strand, within HSERO_RS22380 at 5122.408 kb on + strand at 5122.440 kb on - strand at 5122.728 kb on - strand, within HSERO_RS22385 at 5122.751 kb on + strand, within HSERO_RS22385 at 5122.759 kb on - strand, within HSERO_RS22385 at 5122.874 kb on - strand, within HSERO_RS22385 at 5122.938 kb on - strand, within HSERO_RS22385 at 5123.030 kb on + strand, within HSERO_RS22385 at 5123.129 kb on - strand, within HSERO_RS22385 at 5123.149 kb on + strand, within HSERO_RS22385 at 5123.268 kb on + strand, within HSERO_RS22385 at 5123.660 kb on - strand, within HSERO_RS22385 at 5123.709 kb on + strand, within HSERO_RS22385 at 5123.759 kb on - strand, within HSERO_RS22385 at 5123.951 kb on + strand, within HSERO_RS22385 at 5123.951 kb on + strand, within HSERO_RS22385 at 5124.104 kb on - strand at 5124.157 kb on - strand at 5124.225 kb on - strand at 5124.369 kb on - strand at 5124.455 kb on - strand, within HSERO_RS22390 at 5124.490 kb on + strand, within HSERO_RS22390 at 5124.567 kb on + strand, within HSERO_RS22390 at 5124.586 kb on + strand, within HSERO_RS22390 at 5124.948 kb on + strand, within HSERO_RS22390 at 5124.949 kb on + strand, within HSERO_RS22390 at 5124.957 kb on - strand, within HSERO_RS22390 at 5125.135 kb on - strand, within HSERO_RS22390 at 5125.154 kb on + strand, within HSERO_RS22390 at 5125.155 kb on + strand, within HSERO_RS22390 at 5125.214 kb on + strand, within HSERO_RS22390
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 5,121,533 + +0.0 5,121,627 + -0.6 5,121,632 + -1.4 5,121,857 + HSERO_RS22380 0.24 +0.7 5,121,955 - HSERO_RS22380 0.38 +0.2 5,122,128 + HSERO_RS22380 0.63 -0.3 5,122,408 + +0.6 5,122,440 - -0.6 5,122,728 - HSERO_RS22385 0.16 -0.2 5,122,751 + HSERO_RS22385 0.17 -0.4 5,122,759 - HSERO_RS22385 0.18 +0.2 5,122,874 - HSERO_RS22385 0.24 -0.3 5,122,938 - HSERO_RS22385 0.28 +0.7 5,123,030 + HSERO_RS22385 0.33 -0.2 5,123,129 - HSERO_RS22385 0.39 +0.8 5,123,149 + HSERO_RS22385 0.40 -0.1 5,123,268 + HSERO_RS22385 0.46 -0.1 5,123,660 - HSERO_RS22385 0.68 -0.4 5,123,709 + HSERO_RS22385 0.71 +0.1 5,123,759 - HSERO_RS22385 0.74 +0.0 5,123,951 + HSERO_RS22385 0.85 +0.0 5,123,951 + HSERO_RS22385 0.85 +0.0 5,124,104 - -1.0 5,124,157 - -0.3 5,124,225 - +0.1 5,124,369 - -0.7 5,124,455 - HSERO_RS22390 0.12 +0.5 5,124,490 + HSERO_RS22390 0.15 -0.3 5,124,567 + HSERO_RS22390 0.20 +0.3 5,124,586 + HSERO_RS22390 0.22 +0.3 5,124,948 + HSERO_RS22390 0.48 -0.4 5,124,949 + HSERO_RS22390 0.48 -1.1 5,124,957 - HSERO_RS22390 0.48 +0.8 5,125,135 - HSERO_RS22390 0.61 -0.1 5,125,154 + HSERO_RS22390 0.62 -0.7 5,125,155 + HSERO_RS22390 0.62 -0.2 5,125,214 + HSERO_RS22390 0.67 -0.1
Or see this region's nucleotide sequence