Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01575 and HSERO_RS01580 are separated by 299 nucleotides HSERO_RS01580 and HSERO_RS01585 are separated by 85 nucleotides
HSERO_RS01575: HSERO_RS01575 - transcriptional regulator, at 349,905 to 350,918
_RS01575
HSERO_RS01580: HSERO_RS01580 - AraC family transcriptional regulator, at 351,218 to 352,234
_RS01580
HSERO_RS01585: HSERO_RS01585 - NADP-dependent oxidoreductase, at 352,320 to 353,327
_RS01585
Position (kb) 351
352
353 Strain fitness (log2 ratio) -1
0
1 at 350.279 kb on + strand, within HSERO_RS01575 at 350.343 kb on - strand, within HSERO_RS01575 at 350.406 kb on + strand, within HSERO_RS01575 at 350.432 kb on - strand, within HSERO_RS01575 at 350.454 kb on - strand, within HSERO_RS01575 at 350.470 kb on - strand, within HSERO_RS01575 at 350.470 kb on - strand, within HSERO_RS01575 at 350.470 kb on - strand at 350.470 kb on - strand, within HSERO_RS01575 at 350.637 kb on - strand, within HSERO_RS01575 at 350.759 kb on - strand, within HSERO_RS01575 at 350.831 kb on + strand at 350.869 kb on - strand at 350.956 kb on - strand at 351.124 kb on + strand at 351.305 kb on - strand at 351.364 kb on + strand, within HSERO_RS01580 at 351.452 kb on - strand, within HSERO_RS01580 at 351.458 kb on - strand, within HSERO_RS01580 at 351.500 kb on - strand, within HSERO_RS01580 at 351.541 kb on + strand, within HSERO_RS01580 at 351.555 kb on + strand, within HSERO_RS01580 at 351.582 kb on + strand, within HSERO_RS01580 at 351.597 kb on + strand, within HSERO_RS01580 at 351.597 kb on + strand, within HSERO_RS01580 at 351.868 kb on + strand, within HSERO_RS01580 at 351.907 kb on + strand, within HSERO_RS01580 at 352.026 kb on - strand, within HSERO_RS01580 at 352.027 kb on - strand, within HSERO_RS01580 at 352.257 kb on + strand at 352.272 kb on + strand at 352.365 kb on - strand at 352.472 kb on + strand, within HSERO_RS01585 at 352.472 kb on + strand at 352.577 kb on + strand, within HSERO_RS01585 at 352.603 kb on + strand, within HSERO_RS01585 at 352.719 kb on - strand, within HSERO_RS01585 at 352.915 kb on + strand, within HSERO_RS01585 at 353.001 kb on + strand, within HSERO_RS01585 at 353.003 kb on + strand, within HSERO_RS01585 at 353.075 kb on + strand, within HSERO_RS01585 at 353.100 kb on - strand, within HSERO_RS01585 at 353.129 kb on + strand, within HSERO_RS01585 at 353.182 kb on - strand, within HSERO_RS01585
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 350,279 + HSERO_RS01575 0.37 -0.0 350,343 - HSERO_RS01575 0.43 +0.1 350,406 + HSERO_RS01575 0.49 +0.1 350,432 - HSERO_RS01575 0.52 +0.4 350,454 - HSERO_RS01575 0.54 +0.6 350,470 - HSERO_RS01575 0.56 +0.4 350,470 - HSERO_RS01575 0.56 +0.1 350,470 - -1.0 350,470 - HSERO_RS01575 0.56 -0.4 350,637 - HSERO_RS01575 0.72 -0.4 350,759 - HSERO_RS01575 0.84 -1.4 350,831 + +0.5 350,869 - +0.5 350,956 - +0.5 351,124 + -1.1 351,305 - +0.1 351,364 + HSERO_RS01580 0.14 -0.4 351,452 - HSERO_RS01580 0.23 +0.1 351,458 - HSERO_RS01580 0.24 -0.1 351,500 - HSERO_RS01580 0.28 -0.3 351,541 + HSERO_RS01580 0.32 -0.6 351,555 + HSERO_RS01580 0.33 +0.0 351,582 + HSERO_RS01580 0.36 +0.1 351,597 + HSERO_RS01580 0.37 +0.9 351,597 + HSERO_RS01580 0.37 -0.0 351,868 + HSERO_RS01580 0.64 -0.5 351,907 + HSERO_RS01580 0.68 -1.2 352,026 - HSERO_RS01580 0.79 -0.4 352,027 - HSERO_RS01580 0.80 +0.3 352,257 + -0.7 352,272 + +0.1 352,365 - +0.0 352,472 + HSERO_RS01585 0.15 -0.2 352,472 + -1.0 352,577 + HSERO_RS01585 0.25 -0.6 352,603 + HSERO_RS01585 0.28 +0.1 352,719 - HSERO_RS01585 0.40 -0.4 352,915 + HSERO_RS01585 0.59 +0.3 353,001 + HSERO_RS01585 0.68 -0.3 353,003 + HSERO_RS01585 0.68 +0.5 353,075 + HSERO_RS01585 0.75 +0.7 353,100 - HSERO_RS01585 0.77 -0.4 353,129 + HSERO_RS01585 0.80 +0.2 353,182 - HSERO_RS01585 0.86 +0.7
Or see this region's nucleotide sequence