Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02975

Experiment: PYE with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Cisplatin 0.005 mg/ml
3,128,430	-		CCNA_02972	0.48	+0.6
3,128,430	-		CCNA_02972	0.48	+0.5
3,128,473	+		CCNA_02972	0.55	-0.9
3,128,481	-		CCNA_02972	0.57	+1.1
3,128,481	-		CCNA_02972	0.57	+1.4
3,128,481	-		CCNA_02972	0.57	+0.2
3,128,487	+		CCNA_02972	0.58	-0.5
3,128,487	+		CCNA_02972	0.58	-2.3
3,128,523	+		CCNA_02972	0.63	-0.7
3,128,531	-		CCNA_02972	0.65	+0.4
3,128,531	-		CCNA_02972	0.65	-1.9
3,128,531	-		CCNA_02972	0.65	-2.8
3,128,538	-		CCNA_02972	0.66	-0.5
3,128,574	+		CCNA_02972	0.72	-2.4
3,128,581	-		CCNA_02972	0.73	-0.6
3,128,610	+		CCNA_02972	0.77	-1.9
3,128,610	+		CCNA_02972	0.77	-1.0
3,128,610	+		CCNA_02972	0.77	-1.3
3,128,610	+		CCNA_02972	0.77	+0.0
3,128,610	+		CCNA_02972	0.77	-1.9
3,128,610	+		CCNA_02972	0.77	+0.4
3,128,610	+		CCNA_02972	0.77	-0.6
3,128,615	+		CCNA_02972	0.78	-0.7
3,128,618	-		CCNA_02972	0.79	+0.5
3,128,618	-		CCNA_02972	0.79	-0.8
3,128,618	-		CCNA_02972	0.79	+0.3
3,128,618	-		CCNA_02972	0.79	-2.1
3,128,618	-		CCNA_02972	0.79	-2.0
3,128,618	-		CCNA_02972	0.79	+0.5
3,128,618	-		CCNA_02972	0.79	+0.3
3,128,618	-		CCNA_02972	0.79	+2.0
3,128,618	-		CCNA_02972	0.79	-0.1
3,128,623	-		CCNA_02972	0.80	-0.6
3,128,623	-		CCNA_02972	0.80	+1.6
3,128,625	+		CCNA_02972	0.80	-1.6
3,128,628	-		CCNA_02972	0.80	+0.2
3,128,688	-				-0.7
3,128,704	+				-0.7
3,128,713	+				-2.5
3,128,717	+				+1.1
3,128,717	-				+0.4
3,128,726	+				+0.3
3,128,736	-				-2.2
3,128,736	-				-0.7
3,128,738	+				-1.9
3,128,738	+				-2.0
3,128,746	-				-1.1
3,128,753	-				-2.0
3,128,878	-		CCNA_02973	0.23	-1.7
3,128,884	+		CCNA_02973	0.25	-1.3
3,128,910	+		CCNA_02973	0.34	+1.3
3,128,921	-		CCNA_02973	0.38	+0.4
3,128,923	-		CCNA_02973	0.38	-0.8
3,128,930	+		CCNA_02973	0.41	+0.8
3,128,931	+		CCNA_02973	0.41	-0.0
3,128,936	+		CCNA_02973	0.43	-1.7
3,128,938	-		CCNA_02973	0.44	-0.4
3,128,938	-		CCNA_02973	0.44	-1.3
3,128,939	-		CCNA_02973	0.44	-1.4
3,128,949	-		CCNA_02973	0.47	-2.0
3,129,052	+		CCNA_02973	0.83	-2.3
3,129,052	+		CCNA_02973	0.83	-1.1
3,129,083	+				-0.2
3,129,083	+				+0.9
3,129,124	+				+0.3
3,129,129	+		CCNA_02974	0.11	+0.1
3,129,129	+		CCNA_02974	0.11	+0.4
3,129,145	+		CCNA_02974	0.17	-1.1
3,129,198	+		CCNA_02974	0.36	+0.3
3,129,198	+		CCNA_02974	0.36	+0.4
3,129,203	+		CCNA_02974	0.38	-2.4
3,129,203	+		CCNA_02974	0.38	-0.0
3,129,206	-		CCNA_02974	0.39	-2.3
3,129,208	+		CCNA_02974	0.39	+2.1
3,129,208	+		CCNA_02974	0.39	-1.1
3,129,208	+		CCNA_02974	0.39	-2.2
3,129,211	-		CCNA_02974	0.41	-0.7
3,129,211	-		CCNA_02974	0.41	-0.4
3,129,211	-		CCNA_02974	0.41	-0.0
3,129,211	-		CCNA_02974	0.41	+0.2
3,129,221	-		CCNA_02974	0.44	-1.1
3,129,221	-		CCNA_02974	0.44	-1.5
3,129,234	+		CCNA_02974	0.49	-0.2
3,129,242	-		CCNA_02974	0.52	+1.1
3,129,298	+		CCNA_02974	0.72	-1.6
3,129,306	-		CCNA_02974	0.75	+0.4
3,129,313	-		CCNA_02974	0.77	-0.8
3,129,360	+				-0.6
3,129,360	+				+0.2
3,129,360	+				-0.7
3,129,360	+				+1.4
3,129,360	+				-2.3
3,129,360	+				+0.5
3,129,360	+				+0.3
3,129,368	-				+0.2
3,129,368	-				-2.0
3,129,368	-				-2.4
3,129,368	-				-0.1
3,129,368	-				+1.0
3,129,368	-				-1.7
3,129,368	-				-2.5
3,129,368	-				-1.4
3,129,378	-				+1.8
3,129,455	-				-2.9
3,129,462	+				+0.7
3,129,468	-				-1.7
3,129,475	+				-2.7
3,129,480	+				-1.6
3,129,480	+				-0.8
3,129,480	+				-3.7
3,129,480	+				-2.2
3,129,480	+				-1.6
3,129,480	+				-3.0
3,129,483	-				-1.1
3,129,488	-				-1.7
3,129,552	+				-1.6
3,129,567	+				-2.2
3,129,575	+				-2.5
3,129,601	+		CCNA_02975	0.10	-1.6
3,129,609	-		CCNA_02975	0.11	-0.8
3,129,609	-		CCNA_02975	0.11	-2.7
3,129,644	+		CCNA_02975	0.12	-1.1
3,129,704	+		CCNA_02975	0.15	-3.7
3,129,714	+		CCNA_02975	0.16	-0.9
3,129,716	-		CCNA_02975	0.16	-2.1
3,129,723	+		CCNA_02975	0.16	-3.8
3,129,731	-		CCNA_02975	0.17	-0.4
3,129,731	-		CCNA_02975	0.17	-1.0
3,129,808	-		CCNA_02975	0.21	-2.0
3,129,815	-		CCNA_02975	0.21	+0.2
3,129,850	+		CCNA_02975	0.23	-3.0
3,129,864	-		CCNA_02975	0.24	-1.9
3,129,864	-		CCNA_02975	0.24	-1.6
3,129,881	+		CCNA_02975	0.25	-1.0
3,129,887	-		CCNA_02975	0.25	-1.0
3,129,896	-		CCNA_02975	0.25	-1.4
3,129,937	+		CCNA_02975	0.28	-4.0
3,129,945	-		CCNA_02975	0.28	-0.0
3,129,971	+		CCNA_02975	0.29	-4.6
3,129,976	+		CCNA_02975	0.30	-4.0
3,129,976	+		CCNA_02975	0.30	-3.8
3,129,984	-		CCNA_02975	0.30	-3.3
3,129,993	+		CCNA_02975	0.31	-4.5
3,130,001	-		CCNA_02975	0.31	-1.6
3,130,001	-		CCNA_02975	0.31	+0.4
3,130,006	-		CCNA_02975	0.31	-0.9
3,130,029	+		CCNA_02975	0.32	-2.4
3,130,043	+		CCNA_02975	0.33	-2.8
3,130,078	+		CCNA_02975	0.35	-2.1
3,130,086	-		CCNA_02975	0.35	-1.5
3,130,086	-		CCNA_02975	0.35	-2.3
3,130,086	-		CCNA_02975	0.35	-2.2
3,130,087	+		CCNA_02975	0.35	-3.6
3,130,100	-		CCNA_02975	0.36	-2.1
3,130,128	-		CCNA_02975	0.38	-2.5
3,130,130	-		CCNA_02975	0.38	-3.0
3,130,239	+		CCNA_02975	0.43	-2.4
3,130,247	-		CCNA_02975	0.44	-0.8
3,130,249	+		CCNA_02975	0.44	-3.7
3,130,249	+		CCNA_02975	0.44	-2.0
3,130,249	+		CCNA_02975	0.44	-4.6
3,130,257	-		CCNA_02975	0.44	-2.5
3,130,257	-		CCNA_02975	0.44	-0.8
3,130,257	-		CCNA_02975	0.44	-1.5
3,130,257	-		CCNA_02975	0.44	-2.7
3,130,262	-		CCNA_02975	0.45	-0.9
3,130,285	+		CCNA_02975	0.46	-4.2
3,130,285	+		CCNA_02975	0.46	-2.5
3,130,293	-		CCNA_02975	0.46	-1.4
3,130,293	-		CCNA_02975	0.46	-0.7
3,130,317	-		CCNA_02975	0.47	+1.2
3,130,374	-		CCNA_02975	0.50	-2.8
3,130,398	+		CCNA_02975	0.52	-2.6
3,130,398	+		CCNA_02975	0.52	-0.9
3,130,406	-		CCNA_02975	0.52	-3.4
3,130,447	-		CCNA_02975	0.54	-3.4
3,130,467	+		CCNA_02975	0.55	-1.8
3,130,467	+		CCNA_02975	0.55	-3.3
3,130,475	-		CCNA_02975	0.56	-2.7
3,130,480	+		CCNA_02975	0.56	-4.1
3,130,480	+		CCNA_02975	0.56	-2.9
3,130,480	+		CCNA_02975	0.56	-4.8
3,130,480	+		CCNA_02975	0.56	-4.3
3,130,488	-		CCNA_02975	0.56	-2.7
3,130,509	-		CCNA_02975	0.57	-1.3
3,130,533	+		CCNA_02975	0.59	-4.7
3,130,546	-		CCNA_02975	0.59	-0.0
3,130,547	+		CCNA_02975	0.59	-2.4
3,130,551	+		CCNA_02975	0.60	-3.2
3,130,560	-		CCNA_02975	0.60	-2.7
3,130,560	-		CCNA_02975	0.60	-3.4
3,130,573	+		CCNA_02975	0.61	-2.4
3,130,603	+		CCNA_02975	0.62	-3.1
3,130,605	-		CCNA_02975	0.62	-2.5
3,130,611	-		CCNA_02975	0.63	-2.1
3,130,611	-		CCNA_02975	0.63	-2.5
3,130,620	+		CCNA_02975	0.63	-1.5
3,130,772	-		CCNA_02975	0.71	-1.4
3,130,800	+		CCNA_02975	0.72	-4.3
3,130,822	+		CCNA_02975	0.74	-3.3
3,130,830	-		CCNA_02975	0.74	-1.3
3,130,830	-		CCNA_02975	0.74	-2.7
3,130,830	-		CCNA_02975	0.74	-2.5
3,130,883	+		CCNA_02975	0.77	-2.6
3,130,890	-		CCNA_02975	0.77	-2.5
3,130,891	-		CCNA_02975	0.77	-3.3
3,130,897	-		CCNA_02975	0.78	-4.0
3,130,928	-		CCNA_02975	0.79	-3.1
3,130,938	+		CCNA_02975	0.80	-2.4
3,130,949	+		CCNA_02975	0.80	-3.3
3,131,103	+		CCNA_02975	0.88	-3.6
3,131,162	+				-2.1
3,131,162	+				-1.2
3,131,172	+				-3.4
3,131,172	+				-4.6
3,131,193	-				-4.4
3,131,214	-				-2.6
3,131,232	+				-2.6
3,131,233	+				-2.7
3,131,233	+				-1.6
3,131,234	-				-1.9
3,131,239	+				-4.6
3,131,244	+				-4.4
3,131,247	-				-2.6
3,131,247	-				-3.4
3,131,257	-				-3.9
3,131,262	+				-1.9
3,131,284	-				-2.6
3,131,286	+				-4.7
3,131,286	+				-4.3
3,131,294	-				-3.1
3,131,294	-				-2.0
3,131,294	-				-1.8
3,131,322	+				+0.5
3,131,322	+				+0.2
3,131,324	+				+1.4
3,131,329	+				+1.0
3,131,329	+				+0.5
3,131,330	-				+0.4
3,131,332	-				-0.9
3,131,332	-				+0.9
3,131,335	+				+0.9
3,131,342	-				+1.2
3,131,343	-				+1.1
3,131,345	+				-0.4
3,131,362	+				+1.1
3,131,362	+				+1.1
3,131,371	+				+0.4
3,131,374	-				+1.5
3,131,379	-				+1.1
3,131,391	+				-1.6
3,131,399	-				+0.6
3,131,442	-				+1.7
3,131,468	+				-0.2
3,131,522	+		CCNA_02976	0.12	-0.5
3,131,542	-		CCNA_02976	0.17	+1.4
3,131,545	+		CCNA_02976	0.18	-0.6
3,131,545	+		CCNA_02976	0.18	+0.5
3,131,553	-		CCNA_02976	0.21	+1.6
3,131,553	-		CCNA_02976	0.21	+1.8
3,131,553	-		CCNA_02976	0.21	+1.2
3,131,553	-		CCNA_02976	0.21	+1.5
3,131,558	+		CCNA_02976	0.22	+0.4
3,131,558	+		CCNA_02976	0.22	-0.2
3,131,558	+		CCNA_02976	0.22	-1.2
3,131,560	-		CCNA_02976	0.23	+1.6
3,131,566	-		CCNA_02976	0.24	+0.8
3,131,586	-		CCNA_02976	0.30	+1.2
3,131,648	+		CCNA_02976	0.47	-0.5
3,131,656	-		CCNA_02976	0.49	+1.2
3,131,656	-		CCNA_02976	0.49	+1.5
3,131,659	+				+2.0
3,131,667	-		CCNA_02976	0.52	+0.3
3,131,681	+		CCNA_02976	0.56	-1.8
3,131,728	-		CCNA_02976	0.69	+1.6
3,131,747	-		CCNA_02976	0.74	+0.7
3,131,769	-		CCNA_02976	0.81	+1.2
3,131,800	+		CCNA_02976	0.89	-1.4
3,131,805	+				-0.7
3,131,809	+				+1.4
3,131,809	+				-0.8
3,131,813	-				+0.9
3,131,813	-				-0.4
3,131,815	-				+1.0
3,131,817	-				+0.8
3,131,817	-				+1.8
3,131,817	-				+1.2
3,131,817	-				+1.2
3,131,853	+				-2.5
3,132,008	+				-0.7
3,132,009	+				-1.6
3,132,074	-				-0.6
3,132,075	+				+0.6
3,132,083	-				+1.1
3,132,091	+				-1.9
3,132,126	-		CCNA_02977	0.11	+0.3
3,132,127	-		CCNA_02977	0.11	-1.1
3,132,189	+		CCNA_02977	0.22	-0.1
3,132,189	+		CCNA_02977	0.22	-1.1
3,132,189	+		CCNA_02977	0.22	+0.7
3,132,194	+		CCNA_02977	0.23	+1.0
3,132,194	+		CCNA_02977	0.23	-0.4
3,132,194	+		CCNA_02977	0.23	+0.9
3,132,194	+		CCNA_02977	0.23	-0.2
3,132,197	-		CCNA_02977	0.24	+0.8
3,132,202	-		CCNA_02977	0.24	-0.0
3,132,202	-		CCNA_02977	0.24	-0.2
3,132,248	-		CCNA_02977	0.32	+0.1
3,132,250	+		CCNA_02977	0.33	+1.0
3,132,258	-		CCNA_02977	0.34	+1.8
3,132,269	+		CCNA_02977	0.36	+0.5
3,132,269	+		CCNA_02977	0.36	+1.1
3,132,309	-		CCNA_02977	0.43	-1.0
3,132,311	+		CCNA_02977	0.44	+0.8
3,132,312	+		CCNA_02977	0.44	-1.0
3,132,320	-		CCNA_02977	0.45	+0.2