Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02451

Experiment: PYE with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Cisplatin 0.005 mg/ml
2,590,253	-		CCNA_02449	0.49	-1.4
2,590,310	-		CCNA_02449	0.58	-2.0
2,590,310	-		CCNA_02449	0.58	-0.9
2,590,341	-		CCNA_02449	0.63	-0.0
2,590,382	+		CCNA_02449	0.69	-1.8
2,590,387	+		CCNA_02449	0.70	-2.5
2,590,390	-		CCNA_02449	0.70	+0.1
2,590,397	-		CCNA_02449	0.71	-0.6
2,590,426	+		CCNA_02449	0.76	-0.6
2,590,439	+		CCNA_02449	0.78	-1.6
2,590,439	+		CCNA_02449	0.78	-2.6
2,590,444	+		CCNA_02449	0.78	-0.8
2,590,447	-		CCNA_02449	0.79	-1.2
2,590,449	+		CCNA_02449	0.79	-0.6
2,590,454	+		CCNA_02449	0.80	-1.3
2,590,461	-		CCNA_02449	0.81	-1.8
2,590,527	+				-1.1
2,590,560	+				-0.7
2,590,572	+				-0.9
2,590,580	-				-2.0
2,590,580	-				-0.2
2,590,617	-				-0.6
2,590,708	+				+0.8
2,590,723	-				-1.8
2,590,743	+				-1.1
2,590,743	+				-0.9
2,590,761	+				-0.0
2,590,768	+				+0.8
2,590,791	-				+0.4
2,590,791	-				-0.3
2,590,815	+		CCNA_02450	0.15	-0.4
2,590,830	+		CCNA_02450	0.19	+0.5
2,590,857	+		CCNA_02450	0.25	-0.9
2,590,857	+		CCNA_02450	0.25	+0.3
2,590,875	-		CCNA_02450	0.29	-2.3
2,590,890	+		CCNA_02450	0.33	+0.2
2,590,893	-		CCNA_02450	0.33	-1.3
2,590,904	+		CCNA_02450	0.36	+0.1
2,590,913	-		CCNA_02450	0.38	-0.9
2,590,934	-		CCNA_02450	0.43	-2.8
2,590,946	+		CCNA_02450	0.46	+0.8
2,590,948	+		CCNA_02450	0.46	+0.5
2,590,948	+		CCNA_02450	0.46	+0.7
2,590,956	-		CCNA_02450	0.48	-0.2
2,590,956	-		CCNA_02450	0.48	-0.8
2,590,956	-		CCNA_02450	0.48	-1.6
2,590,956	-		CCNA_02450	0.48	-0.9
2,590,958	+		CCNA_02450	0.48	-0.9
2,590,959	+		CCNA_02450	0.49	-1.0
2,590,984	+		CCNA_02450	0.54	-0.2
2,590,984	+		CCNA_02450	0.54	-0.8
2,590,986	-		CCNA_02450	0.55	-2.6
2,590,986	-		CCNA_02450	0.55	-1.6
2,591,043	+		CCNA_02450	0.68	+0.4
2,591,055	-		CCNA_02450	0.71	-0.0
2,591,072	+		CCNA_02450	0.75	-1.5
2,591,085	-		CCNA_02450	0.78	-0.7
2,591,106	+		CCNA_02450	0.83	-1.7
2,591,134	+		CCNA_02450	0.89	+0.2
2,591,143	+				-0.2
2,591,151	-				-2.2
2,591,153	+				+0.3
2,591,173	-				-3.0
2,591,176	+				+0.5
2,591,176	+				-1.4
2,591,176	+				+0.8
2,591,176	+				+2.8
2,591,176	+				+1.6
2,591,184	-				-2.2
2,591,226	+				+0.2
2,591,251	+				+1.2
2,591,260	+		CCNA_02451	0.11	-0.2
2,591,287	+		CCNA_02451	0.15	-1.5
2,591,287	+		CCNA_02451	0.15	-0.6
2,591,292	+		CCNA_02451	0.16	-2.0
2,591,297	+		CCNA_02451	0.16	-1.7
2,591,310	-		CCNA_02451	0.18	-2.3
2,591,322	+		CCNA_02451	0.20	-1.5
2,591,322	+		CCNA_02451	0.20	+0.2
2,591,322	+		CCNA_02451	0.20	-2.0
2,591,330	-		CCNA_02451	0.22	-2.1
2,591,373	+		CCNA_02451	0.28	-1.1
2,591,404	-		CCNA_02451	0.33	-0.7
2,591,462	+		CCNA_02451	0.42	-0.4
2,591,469	+		CCNA_02451	0.43	-1.6
2,591,470	-		CCNA_02451	0.43	+0.9
2,591,478	-		CCNA_02451	0.44	-2.7
2,591,505	+		CCNA_02451	0.49	-0.0
2,591,509	+		CCNA_02451	0.49	-2.9
2,591,509	+		CCNA_02451	0.49	-2.5
2,591,557	+		CCNA_02451	0.57	-1.6
2,591,628	+		CCNA_02451	0.68	-1.1
2,591,658	+		CCNA_02451	0.72	-1.7
2,591,680	+		CCNA_02451	0.76	-0.2
2,591,730	+		CCNA_02451	0.84	-0.2
2,591,737	+		CCNA_02451	0.85	-2.6
2,591,737	+		CCNA_02451	0.85	-0.4
2,591,742	+		CCNA_02451	0.85	+1.2
2,591,745	-		CCNA_02451	0.86	-0.6
2,591,836	+				+1.2
2,591,844	-				+0.8
2,591,971	+				-0.1
2,591,995	+				+0.4
2,592,002	+				+1.3
2,592,003	-				+0.7
2,592,007	+				+0.5
2,592,010	-				+0.0
2,592,020	+				+0.2
2,592,070	+		CCNA_02452	0.18	+1.3
2,592,078	-		CCNA_02452	0.19	-0.3
2,592,092	+		CCNA_02452	0.22	+0.4
2,592,093	-		CCNA_02452	0.22	+0.1
2,592,149	+		CCNA_02452	0.34	+0.7
2,592,157	-		CCNA_02452	0.35	-0.7
2,592,172	-		CCNA_02452	0.38	-1.9
2,592,195	+		CCNA_02452	0.43	-1.3
2,592,206	-		CCNA_02452	0.45	-0.1
2,592,219	-		CCNA_02452	0.48	-1.0
2,592,277	+		CCNA_02452	0.59	+0.2
2,592,306	+		CCNA_02452	0.65	-2.3
2,592,306	+		CCNA_02452	0.65	-0.3
2,592,314	-		CCNA_02452	0.67	-0.3
2,592,345	-		CCNA_02452	0.73	-0.1
2,592,389	+		CCNA_02452	0.82	-2.0
2,592,397	-		CCNA_02452	0.84	-1.3
2,592,460	+				+0.9
2,592,462	+				+0.2
2,592,470	-				-0.9
2,592,472	+				+0.6
2,592,480	-				+0.0
2,592,503	+				+0.2
2,592,512	-				-2.1
2,592,537	+				+0.7
2,592,562	+		CCNA_02453	0.14	+1.0
2,592,572	+		CCNA_02453	0.16	-0.1
2,592,624	-		CCNA_02453	0.27	+0.3
2,592,631	+		CCNA_02453	0.28	+1.5
2,592,692	-				+0.8
2,592,709	-		CCNA_02453	0.44	+2.5
2,592,713	-		CCNA_02453	0.44	-1.6
2,592,736	+		CCNA_02453	0.49	+0.9
2,592,756	+		CCNA_02453	0.53	+0.4