Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02140

Experiment: PYE with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Cisplatin 0.005 mg/ml
2,297,785	+		CCNA_02138	0.48	-0.4
2,297,793	-		CCNA_02138	0.49	-0.4
2,297,802	-		CCNA_02138	0.50	-3.1
2,297,853	+		CCNA_02138	0.56	-1.5
2,297,858	+		CCNA_02138	0.57	-0.9
2,297,866	-		CCNA_02138	0.58	-1.1
2,297,891	-		CCNA_02138	0.61	-3.5
2,297,905	+		CCNA_02138	0.63	+0.3
2,297,938	-		CCNA_02138	0.67	-2.6
2,297,978	-		CCNA_02138	0.72	-0.4
2,297,980	-		CCNA_02138	0.72	-1.3
2,297,980	-		CCNA_02138	0.72	-2.0
2,297,980	-		CCNA_02138	0.72	-1.0
2,298,053	+		CCNA_02138	0.82	-1.4
2,298,082	+		CCNA_02138	0.85	-1.7
2,298,090	-		CCNA_02138	0.86	-4.0
2,298,127	-				-0.3
2,298,147	-				-1.9
2,298,230	-				+1.3
2,298,262	+		CCNA_02139	0.11	+0.1
2,298,270	-		CCNA_02139	0.13	+0.6
2,298,302	+		CCNA_02139	0.18	+0.4
2,298,302	+		CCNA_02139	0.18	-2.7
2,298,310	-		CCNA_02139	0.20	+0.6
2,298,310	-		CCNA_02139	0.20	+0.7
2,298,357	-		CCNA_02139	0.28	+0.1
2,298,363	-		CCNA_02139	0.29	+1.5
2,298,481	+		CCNA_02139	0.49	-0.5
2,298,481	+		CCNA_02139	0.49	-1.5
2,298,489	-		CCNA_02139	0.50	+0.8
2,298,489	-		CCNA_02139	0.50	-0.8
2,298,537	+		CCNA_02139	0.58	-2.0
2,298,542	+		CCNA_02139	0.59	-1.7
2,298,545	-		CCNA_02139	0.60	+0.1
2,298,600	-		CCNA_02139	0.69	-0.2
2,298,617	-		CCNA_02139	0.72	-0.5
2,298,652	+		CCNA_02139	0.78	-2.0
2,298,665	+		CCNA_02139	0.80	-1.6
2,298,665	-		CCNA_02139	0.80	+0.5
2,298,671	-		CCNA_02139	0.81	-1.7
2,298,693	-		CCNA_02139	0.85	-0.5
2,298,712	-		CCNA_02139	0.88	-1.0
2,298,719	-		CCNA_02139	0.90	-1.0
2,298,753	+				-1.9
2,298,754	+				-0.7
2,298,761	-				+0.9
2,298,795	+				-0.5
2,298,803	-				+0.9
2,298,830	-				-0.5
2,298,888	-				-3.0
2,298,928	+		CCNA_02140	0.14	-1.8
2,299,017	+		CCNA_02140	0.21	-1.4
2,299,017	+		CCNA_02140	0.21	-0.7
2,299,052	-		CCNA_02140	0.25	-1.9
2,299,052	-		CCNA_02140	0.25	-1.9
2,299,052	-		CCNA_02140	0.25	-1.3
2,299,052	-		CCNA_02140	0.25	-1.0
2,299,074	+		CCNA_02140	0.26	-1.6
2,299,114	+		CCNA_02140	0.30	-1.8
2,299,115	-		CCNA_02140	0.30	-1.9
2,299,119	+		CCNA_02140	0.30	-1.2
2,299,135	+		CCNA_02140	0.32	-2.3
2,299,191	-		CCNA_02140	0.37	-1.0
2,299,291	-		CCNA_02140	0.46	-1.3
2,299,349	-		CCNA_02140	0.51	-1.9
2,299,349	-		CCNA_02140	0.51	-2.0
2,299,349	-		CCNA_02140	0.51	-2.5
2,299,397	-		CCNA_02140	0.55	-0.5
2,299,428	-		CCNA_02140	0.58	-0.1
2,299,439	-		CCNA_02140	0.59	-2.5
2,299,509	-		CCNA_02140	0.65	+0.5
2,299,509	-		CCNA_02140	0.65	-1.1
2,299,535	-		CCNA_02140	0.67	-1.2
2,299,545	-		CCNA_02140	0.68	-1.1
2,299,546	-		CCNA_02140	0.68	-2.7
2,299,569	+		CCNA_02140	0.70	-1.4
2,299,723	-		CCNA_02140	0.84	-2.6
2,299,731	+		CCNA_02140	0.85	-0.7
2,299,819	+				-1.1
2,299,859	+				-0.2
2,299,860	+				-2.3
2,299,867	-				-1.3
2,299,959	+				-1.8
2,299,959	+				-1.2
2,299,967	-				+1.2
2,299,973	-				+1.0
2,300,017	+		CCNA_02141	0.14	-2.3
2,300,025	-		CCNA_02141	0.16	+0.3
2,300,081	-		CCNA_02141	0.25	-1.5
2,300,081	-		CCNA_02141	0.25	-0.7
2,300,094	-		CCNA_02141	0.27	+0.1
2,300,140	+		CCNA_02141	0.34	-2.9
2,300,148	-		CCNA_02141	0.36	-0.0
2,300,148	-		CCNA_02141	0.36	+0.7
2,300,148	-		CCNA_02141	0.36	+0.2
2,300,148	-		CCNA_02141	0.36	-0.8
2,300,215	-		CCNA_02141	0.46	+0.8
2,300,252	-		CCNA_02141	0.52	+1.5
2,300,252	-		CCNA_02141	0.52	+0.1
2,300,306	-		CCNA_02141	0.61	+1.4
2,300,450	+		CCNA_02141	0.84	-1.4
2,300,455	+		CCNA_02141	0.85	-2.1
2,300,455	+		CCNA_02141	0.85	-1.5
2,300,458	-		CCNA_02141	0.86	-0.9
2,300,458	-		CCNA_02141	0.86	-0.5
2,300,570	+				-0.7
2,300,627	+				+0.3
2,300,635	-				-2.2
2,300,635	-				-0.1
2,300,635	-				-1.1
2,300,760	+				-0.5
2,300,769	+				+1.0
2,300,777	-				-1.7
2,300,855	+		CCNA_02142	0.11	+0.7
2,300,855	+		CCNA_02142	0.11	+1.3
2,300,863	-		CCNA_02142	0.12	-3.6
2,300,891	-		CCNA_02142	0.16	+0.0