Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3172

Experiment: Mannan from Saccharomyces cerevisiae (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae (C)
4,046,271	-		BT3171	0.43	-3.1
4,046,347	+		BT3171	0.48	+0.1
4,046,358	+		BT3171	0.49	-0.4
4,046,360	+		BT3171	0.49	-2.8
4,046,360	+		BT3171	0.49	-1.4
4,046,360	+		BT3171	0.49	-3.7
4,046,361	-		BT3171	0.49	-0.5
4,046,414	-		BT3171	0.53	-3.4
4,046,658	+		BT3171	0.70	-2.8
4,046,749	-		BT3171	0.76	+0.6
4,046,764	+		BT3171	0.77	+0.1
4,046,771	-		BT3171	0.78	+0.2
4,046,771	-		BT3171	0.78	+1.1
4,046,779	+		BT3171	0.78	+0.8
4,046,786	-		BT3171	0.79	-2.7
4,046,827	-		BT3171	0.82	-3.0
4,046,827	-		BT3171	0.82	+0.7
4,046,831	+		BT3171	0.82	-2.3
4,046,838	+		BT3171	0.83	-0.3
4,046,902	-		BT3171	0.87	-0.0
4,046,903	+		BT3171	0.87	-0.2
4,046,904	-		BT3171	0.87	+1.1
4,046,904	-		BT3171	0.87	+1.9
4,046,989	+				-0.1
4,046,995	-				-3.3
4,047,091	-				+0.6
4,047,119	+				-0.7
4,047,119	+				-0.2
4,047,135	-				-0.4
4,047,157	+				-0.8
4,047,178	+				-2.6
4,047,178	+				-2.9
4,047,246	+				-0.2
4,047,247	-				-2.4
4,047,261	-				+0.5
4,047,268	+				-2.1
4,047,268	+				+1.5
4,047,271	+				+0.4
4,047,319	+				-0.9
4,047,320	-				+1.1
4,047,437	+				-1.0
4,047,504	+				-1.2
4,047,510	+				+0.1
4,047,546	-				-0.2
4,047,548	+				-0.9
4,047,549	-				+1.1
4,047,633	+				-0.9
4,047,633	+				-2.2
4,047,633	+				-3.2
4,047,634	-				+0.1
4,047,667	+		BT3172	0.10	-0.0
4,047,696	+		BT3172	0.11	-0.6
4,047,697	-		BT3172	0.11	-0.2
4,047,697	-		BT3172	0.11	-1.8
4,047,755	+		BT3172	0.12	+0.1
4,047,755	+		BT3172	0.12	-0.7
4,047,756	-		BT3172	0.12	+0.3
4,047,779	+		BT3172	0.13	+1.1
4,047,825	-		BT3172	0.14	-1.0
4,047,843	+		BT3172	0.15	-0.3
4,047,844	-		BT3172	0.15	-3.2
4,047,844	-		BT3172	0.15	-1.2
4,047,856	+		BT3172	0.15	-2.2
4,047,857	-		BT3172	0.15	-1.2
4,048,033	+		BT3172	0.19	+0.1
4,048,043	+		BT3172	0.20	-2.1
4,048,044	-		BT3172	0.20	-0.2
4,048,059	-		BT3172	0.20	-1.5
4,048,086	-		BT3172	0.21	-0.2
4,048,124	+				-1.5
4,048,125	-		BT3172	0.22	-2.3
4,048,125	-		BT3172	0.22	-0.3
4,048,169	+		BT3172	0.23	-0.4
4,048,301	+		BT3172	0.26	-2.5
4,048,307	+		BT3172	0.26	-0.5
4,048,307	+		BT3172	0.26	-0.6
4,048,307	+		BT3172	0.26	+0.8
4,048,308	-		BT3172	0.26	-0.2
4,048,308	-		BT3172	0.26	+0.1
4,048,308	-		BT3172	0.26	-1.7
4,048,311	+		BT3172	0.26	-1.6
4,048,311	+		BT3172	0.26	-0.6
4,048,312	-		BT3172	0.26	-1.2
4,048,350	-		BT3172	0.27	-2.5
4,048,350	-		BT3172	0.27	+0.1
4,048,350	-		BT3172	0.27	+0.3
4,048,350	-		BT3172	0.27	-0.0
4,048,353	+		BT3172	0.28	-1.2
4,048,354	-		BT3172	0.28	+0.4
4,048,354	-		BT3172	0.28	-2.5
4,048,354	-		BT3172	0.28	+0.0
4,048,516	-				-1.2
4,048,516	-		BT3172	0.32	-1.7
4,048,554	+		BT3172	0.33	-0.1
4,048,555	-		BT3172	0.33	+0.5
4,048,555	-		BT3172	0.33	-1.5
4,048,555	-		BT3172	0.33	-0.9
4,048,675	+		BT3172	0.36	-2.7
4,048,696	+		BT3172	0.36	-1.5
4,048,697	-		BT3172	0.36	+0.7
4,048,751	+		BT3172	0.38	-3.3
4,048,785	-		BT3172	0.39	+0.5
4,048,814	-		BT3172	0.39	-3.8
4,048,960	-		BT3172	0.43	-0.6
4,048,974	+		BT3172	0.43	-1.5
4,048,997	+		BT3172	0.44	-0.5
4,048,998	-		BT3172	0.44	-0.2
4,049,031	-		BT3172	0.45	-2.1
4,049,082	+		BT3172	0.46	-2.4
4,049,113	+		BT3172	0.47	-0.7
4,049,170	-		BT3172	0.48	-0.9
4,049,171	+		BT3172	0.48	+0.1
4,049,171	+		BT3172	0.48	-0.8
4,049,171	+		BT3172	0.48	-1.0
4,049,172	-		BT3172	0.48	-0.6
4,049,172	-		BT3172	0.48	+0.6
4,049,249	+		BT3172	0.50	-1.5
4,049,331	+		BT3172	0.52	-1.1
4,049,331	+		BT3172	0.52	-2.9
4,049,335	+		BT3172	0.53	+0.5
4,049,336	-		BT3172	0.53	-2.2
4,049,336	-		BT3172	0.53	-3.0
4,049,441	-		BT3172	0.55	-2.1
4,049,453	+		BT3172	0.56	-3.1
4,049,453	+		BT3172	0.56	+0.0
4,049,454	-		BT3172	0.56	-1.2
4,049,467	-		BT3172	0.56	-0.3
4,049,472	+		BT3172	0.56	+0.2
4,049,472	+		BT3172	0.56	-0.3
4,049,472	+		BT3172	0.56	-2.0
4,049,473	-		BT3172	0.56	-3.2
4,049,496	+		BT3172	0.57	-2.6
4,049,501	+		BT3172	0.57	-2.5
4,049,501	+		BT3172	0.57	-0.9
4,049,502	-		BT3172	0.57	-1.2
4,049,689	+		BT3172	0.62	+0.5
4,049,689	+		BT3172	0.62	+0.3
4,049,690	-		BT3172	0.62	-1.2
4,049,713	+		BT3172	0.62	-0.0
4,049,713	+		BT3172	0.62	-2.0
4,049,812	+		BT3172	0.65	-0.1
4,049,813	-		BT3172	0.65	-0.5
4,049,813	-		BT3172	0.65	-2.1
4,050,005	+		BT3172	0.70	-0.8
4,050,030	-		BT3172	0.70	-3.9
4,050,041	+		BT3172	0.70	-0.5
4,050,049	+		BT3172	0.71	+1.1
4,050,049	+		BT3172	0.71	-2.4
4,050,147	+		BT3172	0.73	+0.1
4,050,194	+		BT3172	0.74	-0.3
4,050,196	+		BT3172	0.74	+0.5
4,050,210	+		BT3172	0.75	-0.3
4,050,210	+		BT3172	0.75	-0.0
4,050,210	+		BT3172	0.75	-0.2
4,050,256	-		BT3172	0.76	-1.3
4,050,256	-		BT3172	0.76	-0.1
4,050,268	+		BT3172	0.76	+2.1
4,050,269	-		BT3172	0.76	+0.1
4,050,310	+		BT3172	0.77	-1.9
4,050,311	-		BT3172	0.77	+0.6
4,050,330	-		BT3172	0.78	+0.1
4,050,332	-		BT3172	0.78	-0.6
4,050,372	-		BT3172	0.79	+3.0
4,050,432	+		BT3172	0.80	+0.2
4,050,464	+		BT3172	0.81	+0.3
4,050,470	-		BT3172	0.81	-1.0
4,050,481	-		BT3172	0.82	-2.0
4,050,481	-		BT3172	0.82	-2.5
4,050,561	-		BT3172	0.84	+1.1
4,050,629	-		BT3172	0.85	+0.4
4,050,629	-		BT3172	0.85	+1.4
4,050,630	+		BT3172	0.85	+0.1
4,050,631	-		BT3172	0.85	-3.2
4,050,631	-		BT3172	0.85	-1.1
4,050,743	+		BT3172	0.88	-0.5
4,050,745	+		BT3172	0.88	-3.5
4,050,751	+		BT3172	0.89	-0.6
4,050,751	+		BT3172	0.89	-1.3
4,050,755	+		BT3172	0.89	-2.0
4,050,755	+		BT3172	0.89	+0.1
4,050,758	-		BT3172	0.89	-2.5
4,050,819	-				-2.2
4,050,824	-				-0.0
4,050,824	-				-1.4
4,050,824	-				-0.9
4,050,911	+				-0.5
4,050,912	-				-1.4
4,050,937	+				-1.5
4,050,938	-				+0.1
4,051,075	-				-0.7
4,051,075	-				-1.5
4,051,114	+				-1.0
4,051,114	+				-1.2
4,051,114	+				-3.8
4,051,114	+				-0.5
4,051,115	-				-1.7
4,051,117	+				-1.2
4,051,117	+				-2.3
4,051,118	-				-0.1
4,051,121	-				-2.1
4,051,145	+				-0.5
4,051,146	-				-0.9
4,051,150	-				-2.2
4,051,150	-				+0.1
4,051,158	+				+0.7
4,051,164	-				+0.4
4,051,168	-				-0.1
4,051,184	+				-3.1
4,051,184	+				-3.4
4,051,185	-				-1.0
4,051,305	+				-1.6
4,051,307	+				+0.6
4,051,308	-				-1.1
4,051,317	+				-0.7
4,051,317	+				-0.7
4,051,328	+				-2.4
4,051,412	+				-0.7
4,051,412	+				+0.2
4,051,418	-				-0.4
4,051,570	-				-1.0
4,051,615	-		BT3173	0.12	+0.1
4,051,660	+		BT3173	0.14	-0.9
4,051,660	+		BT3173	0.14	+0.8
4,051,661	-		BT3173	0.14	-2.3
4,051,661	-		BT3173	0.14	-3.3
4,051,697	+		BT3173	0.15	+0.1
4,051,705	-		BT3173	0.15	+0.1
4,051,846	-		BT3173	0.21	-0.6
4,051,846	-		BT3173	0.21	-0.3
4,051,907	-		BT3173	0.24	-1.2
4,051,907	-		BT3173	0.24	-0.6
4,052,057	-		BT3173	0.30	-3.0
4,052,075	-		BT3173	0.31	+0.2
4,052,124	+		BT3173	0.33	-1.2
4,052,125	-		BT3173	0.33	-1.3
4,052,150	-		BT3173	0.34	-0.9
4,052,185	-		BT3173	0.35	-1.2