Experiment: Mannan from Saccharomyces cerevisiae (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT2311 and BT2312 are separated by 6 nucleotides BT2312 and BT2313 are separated by 14 nucleotides
BT2311: BT2311 - conserved hypothetical protein (NCBI ptt file), at 2,885,216 to 2,886,490
BT2311
BT2312: BT2312 - hypothetical protein (NCBI ptt file), at 2,886,497 to 2,886,952
BT2312
BT2313: BT2313 - conserved hypothetical protein (NCBI ptt file), at 2,886,967 to 2,887,986
BT2313
Position (kb)
2886
2887 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2885.529 kb on - strand, within BT2311 at 2885.539 kb on + strand, within BT2311 at 2885.547 kb on + strand, within BT2311 at 2885.823 kb on + strand, within BT2311 at 2885.823 kb on + strand, within BT2311 at 2885.835 kb on + strand, within BT2311 at 2885.835 kb on + strand, within BT2311 at 2885.867 kb on + strand, within BT2311 at 2885.867 kb on + strand, within BT2311 at 2885.867 kb on + strand, within BT2311 at 2885.870 kb on - strand, within BT2311 at 2885.878 kb on + strand, within BT2311 at 2885.890 kb on - strand, within BT2311 at 2885.999 kb on - strand, within BT2311 at 2886.003 kb on - strand, within BT2311 at 2886.003 kb on - strand, within BT2311 at 2886.078 kb on + strand, within BT2311 at 2886.079 kb on - strand, within BT2311 at 2886.100 kb on - strand, within BT2311 at 2886.280 kb on - strand, within BT2311 at 2886.310 kb on - strand, within BT2311 at 2886.342 kb on + strand, within BT2311 at 2886.352 kb on + strand, within BT2311 at 2886.412 kb on - strand at 2886.417 kb on + strand at 2886.418 kb on - strand at 2886.418 kb on - strand at 2886.465 kb on + strand at 2886.468 kb on - strand at 2886.529 kb on + strand at 2886.552 kb on + strand, within BT2312 at 2886.552 kb on + strand, within BT2312 at 2886.552 kb on + strand, within BT2312 at 2886.553 kb on - strand, within BT2312 at 2886.718 kb on - strand, within BT2312 at 2886.720 kb on + strand, within BT2312 at 2886.734 kb on - strand, within BT2312 at 2886.736 kb on - strand, within BT2312 at 2886.776 kb on + strand, within BT2312 at 2886.826 kb on + strand, within BT2312 at 2886.826 kb on + strand, within BT2312 at 2886.827 kb on - strand, within BT2312 at 2886.834 kb on + strand, within BT2312 at 2886.865 kb on + strand, within BT2312 at 2886.866 kb on - strand, within BT2312 at 2886.869 kb on + strand, within BT2312 at 2886.943 kb on + strand at 2886.943 kb on + strand at 2886.943 kb on + strand at 2886.952 kb on + strand at 2886.952 kb on + strand at 2886.952 kb on + strand at 2886.953 kb on - strand at 2886.953 kb on - strand at 2886.953 kb on - strand at 2886.957 kb on - strand at 2886.958 kb on + strand at 2886.959 kb on - strand at 2886.968 kb on + strand at 2886.973 kb on - strand at 2886.975 kb on + strand at 2887.003 kb on + strand at 2887.004 kb on - strand at 2887.008 kb on + strand at 2887.008 kb on + strand at 2887.067 kb on + strand at 2887.067 kb on + strand at 2887.078 kb on + strand, within BT2313 at 2887.101 kb on + strand, within BT2313 at 2887.139 kb on + strand, within BT2313 at 2887.184 kb on + strand, within BT2313 at 2887.184 kb on + strand, within BT2313 at 2887.184 kb on + strand, within BT2313 at 2887.214 kb on + strand, within BT2313 at 2887.214 kb on + strand, within BT2313 at 2887.355 kb on + strand, within BT2313 at 2887.356 kb on - strand, within BT2313 at 2887.356 kb on - strand, within BT2313 at 2887.385 kb on + strand, within BT2313 at 2887.386 kb on - strand, within BT2313 at 2887.386 kb on - strand, within BT2313 at 2887.476 kb on - strand, within BT2313 at 2887.554 kb on - strand, within BT2313 at 2887.554 kb on - strand, within BT2313 at 2887.581 kb on + strand, within BT2313 at 2887.722 kb on + strand, within BT2313 at 2887.732 kb on + strand, within BT2313 at 2887.745 kb on - strand, within BT2313 at 2887.873 kb on + strand, within BT2313 at 2887.874 kb on - strand, within BT2313 at 2887.875 kb on + strand, within BT2313 at 2887.875 kb on + strand, within BT2313 at 2887.876 kb on - strand, within BT2313 at 2887.884 kb on + strand, within BT2313
Per-strain Table
Position Strand Gene LocusTag Fraction Mannan from Saccharomyces cerevisiae (C) remove 2,885,529 - BT2311 0.25 -0.9 2,885,539 + BT2311 0.25 -0.4 2,885,547 + BT2311 0.26 -3.6 2,885,823 + BT2311 0.48 +0.1 2,885,823 + BT2311 0.48 -1.2 2,885,835 + BT2311 0.49 +0.5 2,885,835 + BT2311 0.49 +0.3 2,885,867 + BT2311 0.51 -0.8 2,885,867 + BT2311 0.51 -2.8 2,885,867 + BT2311 0.51 -0.5 2,885,870 - BT2311 0.51 -0.5 2,885,878 + BT2311 0.52 +0.8 2,885,890 - BT2311 0.53 +0.7 2,885,999 - BT2311 0.61 +0.4 2,886,003 - BT2311 0.62 -1.7 2,886,003 - BT2311 0.62 -1.5 2,886,078 + BT2311 0.68 -1.6 2,886,079 - BT2311 0.68 +1.1 2,886,100 - BT2311 0.69 -1.8 2,886,280 - BT2311 0.83 -1.8 2,886,310 - BT2311 0.86 -3.1 2,886,342 + BT2311 0.88 -1.8 2,886,352 + BT2311 0.89 -2.4 2,886,412 - -1.2 2,886,417 + -0.7 2,886,418 - -2.8 2,886,418 - -0.3 2,886,465 + -0.1 2,886,468 - -0.3 2,886,529 + -2.4 2,886,552 + BT2312 0.12 -0.8 2,886,552 + BT2312 0.12 -0.5 2,886,552 + BT2312 0.12 +2.1 2,886,553 - BT2312 0.12 -2.5 2,886,718 - BT2312 0.48 -4.5 2,886,720 + BT2312 0.49 -1.9 2,886,734 - BT2312 0.52 -0.9 2,886,736 - BT2312 0.52 -1.9 2,886,776 + BT2312 0.61 +0.1 2,886,826 + BT2312 0.72 -2.5 2,886,826 + BT2312 0.72 -2.1 2,886,827 - BT2312 0.72 +0.1 2,886,834 + BT2312 0.74 -2.4 2,886,865 + BT2312 0.81 -1.1 2,886,866 - BT2312 0.81 -2.1 2,886,869 + BT2312 0.82 -1.2 2,886,943 + -0.2 2,886,943 + -0.5 2,886,943 + -0.2 2,886,952 + -0.4 2,886,952 + -2.7 2,886,952 + -1.2 2,886,953 - -1.2 2,886,953 - +0.1 2,886,953 - -1.5 2,886,957 - -1.2 2,886,958 + -0.6 2,886,959 - -0.7 2,886,968 + +0.4 2,886,973 - +0.4 2,886,975 + -0.6 2,887,003 + -1.5 2,887,004 - -3.0 2,887,008 + -0.4 2,887,008 + +1.7 2,887,067 + +0.8 2,887,067 + -0.8 2,887,078 + BT2313 0.11 -2.4 2,887,101 + BT2313 0.13 -2.1 2,887,139 + BT2313 0.17 +0.6 2,887,184 + BT2313 0.21 -2.6 2,887,184 + BT2313 0.21 -0.2 2,887,184 + BT2313 0.21 -0.2 2,887,214 + BT2313 0.24 +1.9 2,887,214 + BT2313 0.24 -0.9 2,887,355 + BT2313 0.38 -1.2 2,887,356 - BT2313 0.38 -0.7 2,887,356 - BT2313 0.38 +0.5 2,887,385 + BT2313 0.41 -0.2 2,887,386 - BT2313 0.41 -2.2 2,887,386 - BT2313 0.41 -1.6 2,887,476 - BT2313 0.50 -0.9 2,887,554 - BT2313 0.58 -0.7 2,887,554 - BT2313 0.58 +0.8 2,887,581 + BT2313 0.60 -2.6 2,887,722 + BT2313 0.74 -2.5 2,887,732 + BT2313 0.75 -1.5 2,887,745 - BT2313 0.76 -2.2 2,887,873 + BT2313 0.89 -2.2 2,887,874 - BT2313 0.89 -2.9 2,887,875 + BT2313 0.89 -3.7 2,887,875 + BT2313 0.89 -3.9 2,887,876 - BT2313 0.89 -1.9 2,887,884 + BT2313 0.90 -0.1
Or see this region's nucleotide sequence