Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00774 and SMc00775 are separated by 289 nucleotides SMc00775 and SMc00776 are separated by 122 nucleotides
SMc00774: SMc00774 - Acetoacetate--CoA ligase (EC 6.2.1.16) <small>(from data)</small>, at 789,645 to 791,597
SMc00774
SMc00775: SMc00775 - iron(III) permease, at 791,887 to 793,569
SMc00775
SMc00776: SMc00776 - sensor histidine kinase, at 793,692 to 797,096
SMc00776
Position (kb) 791
792
793
794 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 791.254 kb on - strand, within SMc00774 at 791.254 kb on - strand, within SMc00774 at 791.254 kb on - strand, within SMc00774 at 791.707 kb on + strand at 791.806 kb on + strand at 791.806 kb on + strand at 791.806 kb on + strand at 791.806 kb on + strand at 791.806 kb on + strand at 791.807 kb on - strand at 791.807 kb on - strand at 791.807 kb on - strand at 791.807 kb on - strand at 791.879 kb on + strand at 791.879 kb on + strand at 791.888 kb on + strand at 791.888 kb on + strand at 792.021 kb on + strand at 792.076 kb on + strand, within SMc00775 at 792.077 kb on - strand, within SMc00775 at 792.260 kb on + strand, within SMc00775 at 792.260 kb on + strand, within SMc00775 at 792.260 kb on + strand, within SMc00775 at 792.260 kb on + strand, within SMc00775 at 792.261 kb on - strand, within SMc00775 at 792.261 kb on - strand, within SMc00775 at 792.261 kb on - strand, within SMc00775 at 792.382 kb on + strand, within SMc00775 at 792.584 kb on + strand, within SMc00775 at 792.584 kb on + strand, within SMc00775 at 792.585 kb on - strand, within SMc00775 at 792.626 kb on - strand, within SMc00775 at 792.837 kb on + strand, within SMc00775 at 792.838 kb on - strand, within SMc00775 at 793.058 kb on + strand, within SMc00775 at 793.058 kb on + strand, within SMc00775 at 793.058 kb on + strand, within SMc00775 at 793.059 kb on - strand, within SMc00775 at 793.059 kb on - strand, within SMc00775 at 793.062 kb on + strand, within SMc00775 at 793.062 kb on + strand, within SMc00775 at 793.062 kb on + strand, within SMc00775 at 793.063 kb on - strand, within SMc00775 at 793.063 kb on - strand, within SMc00775 at 793.063 kb on - strand, within SMc00775 at 793.063 kb on - strand, within SMc00775 at 793.063 kb on - strand, within SMc00775 at 793.064 kb on + strand, within SMc00775 at 793.064 kb on + strand, within SMc00775 at 793.064 kb on + strand, within SMc00775 at 793.064 kb on + strand, within SMc00775 at 793.065 kb on - strand, within SMc00775 at 793.065 kb on - strand, within SMc00775 at 793.065 kb on - strand, within SMc00775 at 793.065 kb on - strand, within SMc00775 at 793.065 kb on - strand, within SMc00775 at 793.065 kb on - strand, within SMc00775 at 793.215 kb on - strand, within SMc00775 at 793.289 kb on + strand, within SMc00775 at 793.289 kb on + strand, within SMc00775 at 793.290 kb on - strand, within SMc00775 at 793.726 kb on - strand at 793.726 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 791,254 - SMc00774 0.82 -0.4 791,254 - SMc00774 0.82 +0.4 791,254 - SMc00774 0.82 -0.2 791,707 + -0.8 791,806 + -0.6 791,806 + +0.1 791,806 + -2.2 791,806 + -0.5 791,806 + +0.8 791,807 - +0.4 791,807 - +1.6 791,807 - -0.7 791,807 - -0.5 791,879 + +0.5 791,879 + -0.4 791,888 + -2.3 791,888 + -0.1 792,021 + -1.8 792,076 + SMc00775 0.11 -1.6 792,077 - SMc00775 0.11 -1.1 792,260 + SMc00775 0.22 -1.4 792,260 + SMc00775 0.22 -2.3 792,260 + SMc00775 0.22 -2.5 792,260 + SMc00775 0.22 -1.5 792,261 - SMc00775 0.22 -0.7 792,261 - SMc00775 0.22 -3.5 792,261 - SMc00775 0.22 -2.5 792,382 + SMc00775 0.29 -1.0 792,584 + SMc00775 0.41 +0.0 792,584 + SMc00775 0.41 -0.6 792,585 - SMc00775 0.41 -0.7 792,626 - SMc00775 0.44 -0.9 792,837 + SMc00775 0.56 -0.9 792,838 - SMc00775 0.57 -0.4 793,058 + SMc00775 0.70 +0.2 793,058 + SMc00775 0.70 -3.0 793,058 + SMc00775 0.70 -1.0 793,059 - SMc00775 0.70 -3.3 793,059 - SMc00775 0.70 -2.6 793,062 + SMc00775 0.70 -1.4 793,062 + SMc00775 0.70 -3.8 793,062 + SMc00775 0.70 -0.9 793,063 - SMc00775 0.70 -1.8 793,063 - SMc00775 0.70 -3.2 793,063 - SMc00775 0.70 -2.1 793,063 - SMc00775 0.70 -0.3 793,063 - SMc00775 0.70 -1.7 793,064 + SMc00775 0.70 -2.4 793,064 + SMc00775 0.70 -2.0 793,064 + SMc00775 0.70 -1.9 793,064 + SMc00775 0.70 -1.5 793,065 - SMc00775 0.70 -1.9 793,065 - SMc00775 0.70 -0.4 793,065 - SMc00775 0.70 -1.8 793,065 - SMc00775 0.70 -2.2 793,065 - SMc00775 0.70 -2.6 793,065 - SMc00775 0.70 -0.2 793,215 - SMc00775 0.79 -1.4 793,289 + SMc00775 0.83 -0.9 793,289 + SMc00775 0.83 -1.6 793,290 - SMc00775 0.83 +0.4 793,726 - -1.1 793,726 - +0.7
Or see this region's nucleotide sequence