Strain Fitness in Sinorhizobium meliloti 1021 around SMa0855

Experiment: Uridine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMa0854 and SMa0855 are separated by 411 nucleotidesSMa0855 and SMa0857 overlap by 1 nucleotides SMa0854: SMa0854 - 3-ketoacyl-ACP reductase, at 471,615 to 472,352 SMa0854 SMa0855: SMa0855 - sulfate adenylyltransferase subunit 2, at 472,764 to 473,663 SMa0855 SMa0857: SMa0857 - bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase, at 473,663 to 475,588 SMa0857 Position (kb) 472 473 474Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 472.089 kb on - strand, within SMa0854at 472.278 kb on + strand, within SMa0854at 472.278 kb on + strand, within SMa0854at 472.278 kb on + strand, within SMa0854at 472.302 kb on + strandat 472.402 kb on + strandat 472.403 kb on - strandat 472.476 kb on - strandat 472.549 kb on + strandat 472.748 kb on + strandat 472.749 kb on - strandat 472.749 kb on - strandat 474.617 kb on - strand, within SMa0857at 474.617 kb on - strand, within SMa0857at 474.617 kb on - strand, within SMa0857at 474.617 kb on - strand, within SMa0857

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Per-strain Table

Position Strand Gene LocusTag Fraction Uridine (N)
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472,089 - SMa0854 0.64 +0.4
472,278 + SMa0854 0.90 -0.5
472,278 + SMa0854 0.90 +0.8
472,278 + SMa0854 0.90 +0.6
472,302 + -4.2
472,402 + -0.5
472,403 - -0.9
472,476 - -0.0
472,549 + -0.3
472,748 + -0.1
472,749 - +2.2
472,749 - +0.0
474,617 - SMa0857 0.50 -1.5
474,617 - SMa0857 0.50 -0.5
474,617 - SMa0857 0.50 -1.3
474,617 - SMa0857 0.50 -0.6

Or see this region's nucleotide sequence