Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5349

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
88,495	-		Pf1N1B4_5348	0.33	+0.4
88,495	-		Pf1N1B4_5348	0.33	+0.6
88,495	-		Pf1N1B4_5348	0.33	+0.2
88,560	-				+0.6
88,560	-		Pf1N1B4_5348	0.86	+0.1
88,642	-				+1.2
88,671	+				+3.0
88,672	-				+1.6
88,793	-				-0.6
88,803	+				+0.3
88,804	-				-0.2
88,859	-				-0.2
88,874	+				+0.2
88,874	+				-0.3
88,875	-				+0.9
88,875	-				+2.0
88,893	+				+1.8
88,970	+				-0.4
88,970	+				+1.2
88,970	+				+0.4
88,970	+				+2.2
88,971	-				+0.2
88,971	-				+0.2
88,971	-				-0.8
88,976	+				+1.2
88,976	+				+0.2
88,976	+				-0.6
88,976	+				-1.1
88,977	-				-0.4
89,028	-				+0.2
89,028	-				-0.2
89,270	+				-1.4
89,270	+				-0.8
89,271	-				-0.8
89,271	-				+0.4
89,300	-				-2.0
89,390	-		Pf1N1B4_5349	0.11	+0.8
89,390	-		Pf1N1B4_5349	0.11	-1.7
89,390	-				+0.7
89,506	-		Pf1N1B4_5349	0.30	-1.2
89,506	-		Pf1N1B4_5349	0.30	+0.2
89,534	+		Pf1N1B4_5349	0.34	-0.4
89,637	+		Pf1N1B4_5349	0.50	+0.2
89,637	+		Pf1N1B4_5349	0.50	-2.0
89,638	-		Pf1N1B4_5349	0.50	-1.8
89,679	+				-0.8
89,680	-		Pf1N1B4_5349	0.57	-0.4
89,908	+				+0.9
89,909	-				+1.2
89,909	-				+0.9
90,148	-				-0.2
90,197	+				+1.6
90,197	+				+1.8
90,197	+				+1.8
90,222	+				+2.3
90,223	-				+1.2
90,242	+				+1.5
90,457	+		Pf1N1B4_5350	0.24	+0.6
90,457	+		Pf1N1B4_5350	0.24	+0.8
90,458	-		Pf1N1B4_5350	0.25	-0.2
90,458	-		Pf1N1B4_5350	0.25	+0.5
90,677	-		Pf1N1B4_5350	0.53	-0.2
90,730	-		Pf1N1B4_5350	0.60	+0.6
90,868	+		Pf1N1B4_5350	0.78	+0.8
90,869	-		Pf1N1B4_5350	0.78	-0.4
90,916	+		Pf1N1B4_5350	0.84	+1.6
90,916	+		Pf1N1B4_5350	0.84	+1.0
90,917	-		Pf1N1B4_5350	0.85	-0.6