Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5333

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
77,980	+		Pf1N1B4_5330	0.19	-0.2
78,022	-		Pf1N1B4_5330	0.32	-1.8
78,152	+				+1.8
78,152	+		Pf1N1B4_5330	0.74	-0.4
78,153	-				+4.3
78,313	+				+0.6
78,313	+				+1.4
78,313	+				-1.2
78,313	+				-0.3
78,314	-				+0.2
78,336	+				+1.2
78,336	+				+0.7
78,336	+				+0.6
78,336	+				+0.7
78,351	+				+1.8
78,351	+				+2.5
78,351	+				-0.4
78,352	-				-0.6
78,352	-				+1.2
78,392	+				-1.8
78,392	+				+1.8
78,425	+				-1.2
78,425	+				-1.6
78,426	-				+0.9
78,426	-				+0.7
78,474	+				+1.2
78,474	+				-0.8
78,475	-				-1.2
78,475	-				-0.4
78,475	-				+0.2
78,475	-				+0.2
78,475	-				-0.8
78,597	-				+1.2
78,597	-				+1.6
78,597	-				-0.4
78,729	+		Pf1N1B4_5331	0.81	-1.4
78,730	-		Pf1N1B4_5331	0.82	-1.1
78,730	-		Pf1N1B4_5331	0.82	+1.0
78,730	-		Pf1N1B4_5331	0.82	-1.2
78,739	-		Pf1N1B4_5331	0.87	+0.1
78,971	-				+1.2
79,045	+		Pf1N1B4_5333	0.12	-1.8
79,045	+		Pf1N1B4_5333	0.12	-1.4
79,046	-		Pf1N1B4_5333	0.12	+1.2
79,046	-		Pf1N1B4_5333	0.12	-3.1
79,046	-		Pf1N1B4_5333	0.12	-1.3
79,106	+		Pf1N1B4_5333	0.22	-0.6
79,268	+		Pf1N1B4_5333	0.48	+1.2
79,268	+		Pf1N1B4_5333	0.48	+0.4
79,269	-		Pf1N1B4_5333	0.48	-0.6
79,269	-		Pf1N1B4_5333	0.48	-1.2
79,393	-		Pf1N1B4_5333	0.68	+0.8
79,393	-		Pf1N1B4_5333	0.68	+0.0
79,446	-		Pf1N1B4_5333	0.76	-0.4
79,501	+		Pf1N1B4_5333	0.85	+0.4
79,501	+		Pf1N1B4_5333	0.85	-2.9
79,502	-		Pf1N1B4_5333	0.85	-0.7
79,502	-		Pf1N1B4_5333	0.85	-2.0
79,576	+				-2.0
79,576	+				-0.2
79,576	+				+1.6
79,576	+				+1.2
79,577	-				+1.6
79,577	-				+0.4
79,577	-				+0.7
79,577	-				-0.5
79,577	-				-0.4
79,580	+				+1.3
79,580	+				+2.7
79,726	-				-0.4
79,728	+				-0.4
79,793	+		Pf1N1B4_5334	0.32	+0.4
79,794	-		Pf1N1B4_5334	0.33	-0.2
79,794	-		Pf1N1B4_5334	0.33	+0.4
79,794	-		Pf1N1B4_5334	0.33	+0.8
79,794	-		Pf1N1B4_5334	0.33	+0.5
79,797	+		Pf1N1B4_5334	0.34	-2.0
80,045	+				-0.6
80,045	+				+0.2
80,045	+				-1.2
80,046	-				-0.4
80,147	+		Pf1N1B4_5335	0.12	+0.2
80,147	+		Pf1N1B4_5335	0.12	+1.2
80,148	-		Pf1N1B4_5335	0.12	-0.4
80,227	+		Pf1N1B4_5335	0.40	-0.4
80,227	+				+1.2
80,227	+		Pf1N1B4_5335	0.40	-0.0
80,227	+		Pf1N1B4_5335	0.40	+0.4
80,227	+		Pf1N1B4_5335	0.40	+0.2
80,227	+		Pf1N1B4_5335	0.40	-0.2
80,227	+		Pf1N1B4_5335	0.40	+0.9
80,227	+		Pf1N1B4_5335	0.40	+2.2
80,227	+		Pf1N1B4_5335	0.40	+0.8
80,227	+		Pf1N1B4_5335	0.40	+1.9
80,227	+		Pf1N1B4_5335	0.40	-0.8
80,228	-		Pf1N1B4_5335	0.40	-0.1
80,228	-		Pf1N1B4_5335	0.40	+0.7
80,228	-				+1.6
80,228	-		Pf1N1B4_5335	0.40	-1.2
80,348	+		Pf1N1B4_5335	0.82	+0.1
80,348	+		Pf1N1B4_5335	0.82	+0.7
80,349	-		Pf1N1B4_5335	0.82	+0.6
80,349	-		Pf1N1B4_5335	0.82	+0.4
80,349	-		Pf1N1B4_5335	0.82	+0.4
80,380	+				+0.3
80,584	-				+1.2