Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5252

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
9,558	+				+1.2
9,558	+				+0.2
9,596	+				+0.1
9,597	-				+0.6
9,640	-		Pf1N1B4_5251	0.14	-0.6
9,640	-		Pf1N1B4_5251	0.14	+0.2
9,640	-		Pf1N1B4_5251	0.14	+0.4
9,640	-		Pf1N1B4_5251	0.14	-1.2
9,640	-		Pf1N1B4_5251	0.14	+0.5
9,640	-		Pf1N1B4_5251	0.14	-0.9
9,712	+		Pf1N1B4_5251	0.23	-0.6
9,920	+				+0.6
9,920	+		Pf1N1B4_5251	0.47	-0.8
10,136	+		Pf1N1B4_5251	0.73	-1.2
10,136	+		Pf1N1B4_5251	0.73	+0.3
10,136	+		Pf1N1B4_5251	0.73	-0.4
10,136	+		Pf1N1B4_5251	0.73	+0.4
10,136	+		Pf1N1B4_5251	0.73	-0.7
10,136	+		Pf1N1B4_5251	0.73	+1.9
10,136	+		Pf1N1B4_5251	0.73	-0.2
10,136	+		Pf1N1B4_5251	0.73	-0.8
10,137	-		Pf1N1B4_5251	0.73	+0.8
10,137	-		Pf1N1B4_5251	0.73	-0.7
10,137	-				-0.4
10,137	-				+1.2
10,357	-				-0.0
10,384	+				+0.3
10,401	-				+0.4
10,401	-				+1.8
10,453	-				+0.8
10,453	-				+1.0
10,496	-				+0.1
10,496	-				+1.8
10,496	-				+0.6
10,496	-				-1.2
10,500	-				+1.2
10,500	-				-0.2
10,500	-				-1.6
10,500	-				+0.3
10,552	-				+0.2
10,733	+		Pf1N1B4_5252	0.27	-0.7
10,780	-		Pf1N1B4_5252	0.33	+1.1
10,803	+		Pf1N1B4_5252	0.36	-1.8
10,803	+		Pf1N1B4_5252	0.36	+1.8
10,819	+		Pf1N1B4_5252	0.38	-0.1
10,821	+		Pf1N1B4_5252	0.39	+0.2
10,821	+		Pf1N1B4_5252	0.39	-0.1
10,821	+		Pf1N1B4_5252	0.39	-0.2
10,822	-		Pf1N1B4_5252	0.39	+2.9
10,822	-		Pf1N1B4_5252	0.39	+1.1
10,822	-		Pf1N1B4_5252	0.39	-0.0
10,841	-		Pf1N1B4_5252	0.41	-0.8
10,929	+		Pf1N1B4_5252	0.53	+1.9
11,130	+		Pf1N1B4_5252	0.81	-1.2
11,131	-		Pf1N1B4_5252	0.81	+1.0
11,131	-		Pf1N1B4_5252	0.81	+0.9
11,131	-		Pf1N1B4_5252	0.81	-0.8
11,134	+		Pf1N1B4_5252	0.81	-1.4
11,134	+		Pf1N1B4_5252	0.81	+1.2
11,159	+		Pf1N1B4_5252	0.84	-0.1
11,205	+				-0.2
11,206	-				-0.8
11,206	-				+0.3
11,206	-				-1.2
11,408	+		Pf1N1B4_5253	0.16	-0.4
11,408	+		Pf1N1B4_5253	0.16	+0.3
11,408	+		Pf1N1B4_5253	0.16	+0.2
11,408	+		Pf1N1B4_5253	0.16	+0.6
11,409	-		Pf1N1B4_5253	0.16	+1.9
11,423	+		Pf1N1B4_5253	0.18	-2.2
11,423	+		Pf1N1B4_5253	0.18	+0.8
11,424	-		Pf1N1B4_5253	0.18	+2.6
11,432	+		Pf1N1B4_5253	0.19	-1.0
11,432	+				-0.8
11,433	-		Pf1N1B4_5253	0.20	-0.4
11,790	-				-0.2
11,790	-		Pf1N1B4_5253	0.66	+0.6
11,864	+		Pf1N1B4_5253	0.76	+1.2
11,920	+		Pf1N1B4_5253	0.83	+0.4
11,920	+		Pf1N1B4_5253	0.83	+2.8
11,920	+		Pf1N1B4_5253	0.83	-0.8
11,920	+		Pf1N1B4_5253	0.83	+0.2
11,921	-		Pf1N1B4_5253	0.84	-0.0
11,921	-		Pf1N1B4_5253	0.84	+1.0
11,924	+		Pf1N1B4_5253	0.84	-0.1
11,924	+		Pf1N1B4_5253	0.84	+1.6
11,924	+		Pf1N1B4_5253	0.84	-0.3
11,925	-		Pf1N1B4_5253	0.84	+1.8
11,925	-		Pf1N1B4_5253	0.84	+0.4
11,969	+				+1.2
11,969	+				+1.7
12,033	+				-0.2
12,033	+				-1.6
12,033	+				+0.6
12,033	+				+1.8
12,034	-				+1.0
12,034	-				+0.6
12,034	-				+0.8
12,068	-				+0.8
12,068	-				-1.4
12,153	+				-1.2