Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5010

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
5,559,680	-				+0.9
5,559,841	+				-0.1
5,559,842	-				+1.9
5,559,899	+				+1.9
5,560,068	+				+1.9
5,560,238	+		Pf1N1B4_5009	0.69	-0.3
5,560,398	+				+1.3
5,560,398	+				+0.3
5,560,441	+				-0.3
5,560,587	+				-2.1
5,560,673	-				-0.9
5,560,673	-				-0.9
5,560,937	-		Pf1N1B4_5010	0.22	-1.5
5,560,992	-				-1.3
5,561,124	+		Pf1N1B4_5010	0.34	-0.4
5,561,141	-		Pf1N1B4_5010	0.36	-1.5
5,561,453	-		Pf1N1B4_5010	0.55	-0.3
5,561,463	+		Pf1N1B4_5010	0.56	-0.9
5,561,464	-		Pf1N1B4_5010	0.56	-0.3
5,561,508	-		Pf1N1B4_5010	0.59	-1.6
5,561,508	-		Pf1N1B4_5010	0.59	-0.3
5,561,628	+		Pf1N1B4_5010	0.67	-0.3
5,561,629	-		Pf1N1B4_5010	0.67	-1.2
5,561,781	+		Pf1N1B4_5010	0.76	-0.9
5,561,782	-				-1.7
5,561,782	-		Pf1N1B4_5010	0.77	+0.3
5,561,782	-		Pf1N1B4_5010	0.77	-1.5
5,561,782	-		Pf1N1B4_5010	0.77	-0.1
5,561,998	+				-0.3
5,561,998	+				-3.1
5,562,148	+				-0.3
5,562,148	+				-0.9
5,562,148	+				+0.2
5,562,229	-				-1.7
5,562,229	-				-2.5
5,562,232	+				+1.3
5,562,232	+				-1.7
5,562,276	-				-2.8
5,562,276	-				+0.3
5,562,276	-				-1.5
5,562,416	-		Pf1N1B4_5011	0.25	-2.7
5,562,813	+				-0.7
5,562,882	-				-0.4
5,562,956	+				+1.7
5,562,960	-				-0.7
5,563,036	+				+0.3
5,563,037	-				+0.3
5,563,037	-				-0.0
5,563,037	-				-0.0
5,563,072	+				+1.1