Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4864

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
5,379,232	-		Pf1N1B4_4863	0.62	+1.9
5,379,379	-		Pf1N1B4_4863	0.73	-0.1
5,379,851	-				-0.4
5,379,851	-				-0.4
5,379,854	+				-0.7
5,379,854	+				+1.3
5,379,855	-				+0.9
5,379,855	-				+0.3
5,379,855	-				-0.5
5,379,855	-				-0.1
5,379,855	-				-1.1
5,379,855	-				+0.5
5,379,855	-				+0.4
5,380,110	+		Pf1N1B4_4864	0.11	-0.1
5,380,111	-		Pf1N1B4_4864	0.11	+1.1
5,380,111	-				+1.9
5,380,254	-		Pf1N1B4_4864	0.15	+2.1
5,380,286	-		Pf1N1B4_4864	0.16	-0.1
5,380,337	+				-0.7
5,380,338	-		Pf1N1B4_4864	0.18	-0.2
5,380,476	-		Pf1N1B4_4864	0.22	+0.8
5,380,476	-		Pf1N1B4_4864	0.22	+1.2
5,380,476	-		Pf1N1B4_4864	0.22	+0.7
5,380,476	-		Pf1N1B4_4864	0.22	-0.8
5,380,625	+		Pf1N1B4_4864	0.27	-2.0
5,380,625	+		Pf1N1B4_4864	0.27	-2.0
5,380,658	+		Pf1N1B4_4864	0.28	+0.7
5,380,673	+		Pf1N1B4_4864	0.29	+1.3
5,380,772	+		Pf1N1B4_4864	0.32	-0.2
5,380,773	-		Pf1N1B4_4864	0.32	+0.2
5,380,773	-		Pf1N1B4_4864	0.32	+1.0
5,380,841	+		Pf1N1B4_4864	0.34	-0.4
5,380,842	-		Pf1N1B4_4864	0.34	-2.7
5,380,943	+		Pf1N1B4_4864	0.37	-0.0
5,380,943	+		Pf1N1B4_4864	0.37	-2.7
5,380,944	-		Pf1N1B4_4864	0.37	+0.7
5,380,944	-		Pf1N1B4_4864	0.37	+0.3
5,381,149	-		Pf1N1B4_4864	0.43	-1.0
5,381,149	-		Pf1N1B4_4864	0.43	-1.3
5,381,149	-		Pf1N1B4_4864	0.43	+0.3
5,381,217	-		Pf1N1B4_4864	0.46	-1.3
5,381,336	-		Pf1N1B4_4864	0.49	-0.4
5,381,349	-		Pf1N1B4_4864	0.50	-2.0
5,381,349	-		Pf1N1B4_4864	0.50	-0.1
5,381,349	-				-0.3
5,381,548	-		Pf1N1B4_4864	0.56	+0.4
5,381,549	+				-0.7
5,381,890	+		Pf1N1B4_4864	0.67	-0.8
5,381,966	+		Pf1N1B4_4864	0.69	-2.3
5,381,966	+		Pf1N1B4_4864	0.69	-0.7
5,382,196	-		Pf1N1B4_4864	0.76	+1.1
5,382,479	+		Pf1N1B4_4864	0.85	-0.2
5,382,480	-				+0.3
5,382,480	-		Pf1N1B4_4864	0.85	-0.0
5,382,491	+		Pf1N1B4_4864	0.85	+0.3
5,382,492	-		Pf1N1B4_4864	0.85	-1.3
5,382,719	+				-1.3
5,382,719	+				-0.3
5,382,719	+				+0.3
5,382,719	+				-0.7
5,382,719	+				-2.3
5,382,720	-				-1.7
5,382,720	-				-1.7
5,382,957	+				+0.7
5,382,957	+				-0.1
5,383,331	+		Pf1N1B4_4865	0.29	-0.4
5,383,554	-		Pf1N1B4_4865	0.47	-0.1
5,383,557	+		Pf1N1B4_4865	0.47	-0.3
5,383,558	-		Pf1N1B4_4865	0.47	+0.1
5,383,558	-		Pf1N1B4_4865	0.47	+1.1
5,383,689	+		Pf1N1B4_4865	0.58	-0.6