Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4858

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
5,370,785	+				-1.1
5,370,860	+				-0.7
5,370,910	+				+0.3
5,370,919	+				+1.5
5,370,919	+				+0.5
5,370,925	+				+3.4
5,370,940	+				+1.5
5,371,118	+		Pf1N1B4_4857	0.31	+1.9
5,371,118	+		Pf1N1B4_4857	0.31	+1.3
5,371,150	+		Pf1N1B4_4857	0.35	+0.1
5,371,150	+		Pf1N1B4_4857	0.35	+0.3
5,371,150	+		Pf1N1B4_4857	0.35	+2.6
5,371,201	+		Pf1N1B4_4857	0.42	-0.7
5,371,342	+		Pf1N1B4_4857	0.59	-0.7
5,371,342	+		Pf1N1B4_4857	0.59	+1.3
5,371,343	-		Pf1N1B4_4857	0.59	+0.0
5,371,378	+				-0.1
5,371,378	+				-1.0
5,371,381	+		Pf1N1B4_4857	0.64	-1.5
5,371,381	+		Pf1N1B4_4857	0.64	+0.6
5,371,381	+		Pf1N1B4_4857	0.64	-1.0
5,371,393	+		Pf1N1B4_4857	0.65	-1.7
5,371,621	+				-0.7
5,371,663	+				+0.3
5,371,663	+				+0.7
5,371,663	+				+1.3
5,371,663	+				+1.9
5,371,663	+				+0.4
5,371,679	+				+2.2
5,371,758	+				-1.0
5,371,762	+				-0.1
5,371,779	+				+0.7
5,371,853	+				-2.5
5,372,032	+		Pf1N1B4_4858	0.23	+0.6
5,372,036	+				+2.1
5,372,052	-		Pf1N1B4_4858	0.25	+1.9
5,372,335	+		Pf1N1B4_4858	0.48	+2.6
5,372,511	+		Pf1N1B4_4858	0.62	+0.7
5,372,511	+		Pf1N1B4_4858	0.62	+1.1
5,372,511	+		Pf1N1B4_4858	0.62	+1.8
5,372,511	+		Pf1N1B4_4858	0.62	+0.8
5,372,511	+		Pf1N1B4_4858	0.62	+2.2
5,372,511	+		Pf1N1B4_4858	0.62	+0.8
5,372,511	+		Pf1N1B4_4858	0.62	+0.3
5,372,511	+				+1.9
5,372,512	-				+1.3
5,372,691	+		Pf1N1B4_4858	0.77	+1.5
5,372,691	+		Pf1N1B4_4858	0.77	+1.7
5,372,692	-		Pf1N1B4_4858	0.77	-0.9
5,372,692	-				-0.7
5,372,699	+		Pf1N1B4_4858	0.78	-0.0
5,372,699	+		Pf1N1B4_4858	0.78	+1.3
5,372,699	+		Pf1N1B4_4858	0.78	+0.8
5,372,699	+		Pf1N1B4_4858	0.78	-0.2
5,372,699	+		Pf1N1B4_4858	0.78	+0.3
5,372,835	+		Pf1N1B4_4858	0.89	+2.6
5,372,839	+		Pf1N1B4_4858	0.89	+3.4
5,372,839	+		Pf1N1B4_4858	0.89	+2.4
5,372,839	+		Pf1N1B4_4858	0.89	+1.2
5,372,839	+		Pf1N1B4_4858	0.89	+3.0
5,372,980	+				+0.6
5,372,980	+				+1.3
5,372,980	+				+0.5
5,372,990	+				+2.8
5,372,990	+				+0.6
5,372,990	+				+1.3
5,372,990	+				+1.9
5,373,510	+				-0.7
5,373,510	+				-0.2
5,373,656	+				-1.8
5,373,656	+				-0.4
5,373,657	-				-0.5
5,373,657	-				+0.9