Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_474

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
564,608	+		Pf1N1B4_473	0.68	+0.9
564,608	+				-1.5
564,609	-		Pf1N1B4_473	0.68	+0.9
564,609	-		Pf1N1B4_473	0.68	+0.0
564,881	+		Pf1N1B4_473	0.80	-0.1
564,882	-		Pf1N1B4_473	0.80	+0.9
565,174	+				-0.7
565,174	+				+0.3
565,175	-				-0.5
565,175	-				+1.9
565,175	-				-0.4
565,258	+				+0.1
565,262	-				-0.3
565,262	-				+0.4
565,320	+				-1.1
565,320	+				+0.1
565,321	+				+0.9
565,371	+				-0.7
565,371	+				+0.1
565,371	+				+2.7
565,371	+				+1.4
565,371	+				-0.1
565,371	+				+1.5
565,371	+				+0.4
565,372	-				+0.5
565,379	+				-0.5
565,414	-				-0.7
565,426	+				+0.5
565,426	+				-0.1
565,426	+				+0.9
565,426	+				-0.1
565,426	+				+0.3
565,426	+				-1.7
565,426	+				+0.9
565,426	+				-1.5
565,426	+				-0.4
565,426	+				+0.9
565,426	+				-1.1
565,426	+				+0.1
565,427	-				-0.4
565,427	-				+0.9
565,427	-				-1.7
565,456	+				-1.5
565,481	+				+1.3
565,481	+				-2.3
565,745	-		Pf1N1B4_474	0.56	-1.0
565,745	-		Pf1N1B4_474	0.56	-0.7
565,745	-		Pf1N1B4_474	0.56	-0.9
565,745	-		Pf1N1B4_474	0.56	-2.0
565,745	-		Pf1N1B4_474	0.56	+0.5
565,749	-		Pf1N1B4_474	0.57	-0.7
565,898	+		Pf1N1B4_474	0.85	-2.3
565,898	+		Pf1N1B4_474	0.85	-1.1
565,916	+		Pf1N1B4_474	0.89	+0.3
565,916	+		Pf1N1B4_474	0.89	+0.0
565,916	+		Pf1N1B4_474	0.89	-1.1
565,916	+		Pf1N1B4_474	0.89	-1.9
565,916	+		Pf1N1B4_474	0.89	-2.6
565,917	-		Pf1N1B4_474	0.89	-2.1
565,917	-		Pf1N1B4_474	0.89	-1.1
565,917	-		Pf1N1B4_474	0.89	+0.3
565,917	-		Pf1N1B4_474	0.89	-1.1
565,955	-				+1.5
566,009	+				-0.3
566,009	+				-1.7
566,024	+				-1.7
566,024	+				-0.5
566,025	-				+0.4
566,025	-				-1.7
566,025	-				-1.7
566,061	+				+0.9
566,061	+				-2.5
566,061	+				-0.1
566,061	+				+0.3
566,061	+				+0.6
566,061	+				+0.2
566,061	+				-1.1
566,061	+				-1.5
566,061	+				-0.5
566,061	+				+0.0
566,061	+				+0.6
566,061	+				-2.1
566,061	+				-0.2
566,061	+				+0.1
566,061	+				-0.5
566,061	+				-0.5
566,061	+				-0.0
566,062	-				+0.0
566,062	-				+0.9
566,062	-				-0.5
566,062	-				-1.1
566,062	-				-0.7
566,062	-				+0.3
566,062	-				-1.9
566,062	-				-1.5
566,062	-				-0.5
566,062	-				-1.1
566,062	-				-0.7
566,062	-				+0.5
566,065	+				-0.5
566,065	+				-1.5
566,418	+				+0.3
566,557	+				+0.1
566,557	+				+1.2
566,557	+				+0.9
566,557	+				-0.3
566,557	+				-0.5
566,557	+				+1.1
566,557	+				+0.9
566,557	+				-1.8
566,557	+				-1.1
566,557	+				-0.7
566,558	-				+1.0
566,558	-				+0.7
566,558	-				-1.7
566,558	-				+0.3
566,558	-				+1.5
566,558	-				-0.7
566,558	-				-1.5
566,626	+				-1.2
566,626	+				-1.1
566,626	+				+0.5
566,626	+				+1.3
566,626	+				+0.2
566,626	+				+0.5
566,626	+				-1.7
566,626	+				-1.5
566,626	+				-0.5
566,627	-				-1.1
566,627	-				-0.9
566,627	-				-1.1
566,627	-				-1.1
566,627	-				-1.7
566,627	-				-0.1
566,627	-				+0.4
566,627	-				-0.7
566,627	-				-0.7
566,695	+				-0.5
566,695	+				-1.9
566,695	+				+0.3
566,695	+				-1.5
566,695	+				+1.6
566,695	+				-0.5
566,695	+				-0.1
566,695	+				-0.7
566,695	+				-1.4
566,695	+				+1.3
566,695	+				-0.8
566,695	+				+0.2
566,695	+				-1.8
566,696	-				-1.1
566,696	-				-2.1
566,696	-				+0.2
566,696	-				-0.7
566,696	-				-0.1
566,696	-				-1.7
566,696	-				-0.7
566,696	-				+0.3
566,764	+				+0.9
566,764	+				-1.2
566,764	+				-0.1
566,764	+				-0.1
566,764	+				+1.3
566,764	+				-0.9
566,764	+				+1.4
566,764	+				+2.5
566,764	+				-0.7
566,764	+				-1.1
566,765	-				+0.1
566,765	-				-1.1
566,765	-				-0.1