Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4405

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
4,865,056	+		Pf1N1B4_4404	0.38	-2.5
4,865,249	+		Pf1N1B4_4404	0.58	+0.1
4,865,249	+		Pf1N1B4_4404	0.58	-1.3
4,865,249	+		Pf1N1B4_4404	0.58	+0.2
4,865,442	+		Pf1N1B4_4404	0.78	+0.3
4,865,464	+		Pf1N1B4_4404	0.80	-0.5
4,865,465	-				+1.0
4,865,667	+				-1.0
4,865,754	+				+0.3
4,865,754	+				+1.1
4,865,775	+				+0.5
4,865,775	+				-0.5
4,865,775	+				+0.5
4,865,775	+				-2.0
4,865,775	+				+0.5
4,865,775	+				+0.5
4,865,854	+				-1.0
4,865,855	-				+0.5
4,865,855	-				-0.3
4,865,855	-				-1.5
4,865,858	+				+0.9
4,865,858	+				-0.5
4,865,858	+				-0.5
4,865,859	-				-1.8
4,865,859	-				-1.5
4,865,859	-				-0.5
4,865,859	-				-0.5
4,865,859	-				-0.5
4,865,859	-				+0.1
4,865,893	+				+1.9
4,865,893	+				-0.5
4,865,894	-				-0.5
4,865,896	+				-1.0
4,865,916	-				+0.1
4,866,102	+		Pf1N1B4_4405	0.14	+0.5
4,866,103	-		Pf1N1B4_4405	0.14	-0.0
4,866,103	-				+1.1
4,866,103	-		Pf1N1B4_4405	0.14	-0.7
4,866,245	+		Pf1N1B4_4405	0.24	-0.3
4,866,245	+		Pf1N1B4_4405	0.24	+0.5
4,866,296	+		Pf1N1B4_4405	0.27	+0.5
4,866,369	+		Pf1N1B4_4405	0.32	+0.3
4,866,369	+		Pf1N1B4_4405	0.32	+2.4
4,866,370	-				-0.0
4,866,371	+		Pf1N1B4_4405	0.32	+0.1
4,866,773	+		Pf1N1B4_4405	0.59	-0.5
4,866,773	+		Pf1N1B4_4405	0.59	+0.2
4,866,774	-		Pf1N1B4_4405	0.59	-0.3
4,867,039	+		Pf1N1B4_4405	0.76	+0.9
4,867,189	+		Pf1N1B4_4405	0.86	-0.1
4,867,189	+		Pf1N1B4_4405	0.86	-1.0
4,867,189	+		Pf1N1B4_4405	0.86	+0.3
4,867,190	-		Pf1N1B4_4405	0.86	-0.2
4,867,704	+				+0.3
4,867,878	-		Pf1N1B4_4407	0.11	+0.5
4,868,062	-		Pf1N1B4_4407	0.16	-0.1
4,868,094	-		Pf1N1B4_4407	0.17	-0.5
4,868,112	-		Pf1N1B4_4407	0.17	-0.5